RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 V9GYY9 64 aa7.13□□□□□ -1.27
UPK3B-203ENST00000394849 KRTAP5-4Q6L8H1 288 aa7.09□□□□□ -1.27
UPK3B-203ENST00000394849 KRTAP5-7Q6L8G8 165 aa7.08□□□□□ -1.28
UPK3B-203ENST00000394849 MIR22HGQ0VDD5 57 aa7.06□□□□□ -1.28
UPK3B-203ENST00000394849 PSPHP1O15172 72 aa7.05□□□□□ -1.28
UPK3B-203ENST00000394849 MT1MQ8N339 61 aa7.05□□□□□ -1.28
UPK3B-203ENST00000394849 Q1T7F1 81 aa7.04□□□□□ -1.28
UPK3B-203ENST00000394849 KRTAP19-5Q3LI72 72 aa7.03□□□□□ -1.28
UPK3B-203ENST00000394849 C10orf95Q9H7T3 257 aa7.03□□□□□ -1.28
UPK3B-203ENST00000394849 TNP1P09430 55 aa7.02□□□□□ -1.29
UPK3B-203ENST00000394849 PCP4P48539 62 aa7.02□□□□□ -1.29
UPK3B-203ENST00000394849 KRTAP4-6Q9BYQ5 205 aa7.01□□□□□ -1.29
UPK3B-203ENST00000394849 KRTAP5-3Q6L8H2 238 aa6.95□□□□□ -1.3
UPK3B-203ENST00000394849 K7ERS5 55 aa6.93□□□□□ -1.3
UPK3B-203ENST00000394849 MT1LQ93083 61 aa6.93□□□□□ -1.3
UPK3B-203ENST00000394849 RPS28P62857 69 aaKnown RBP6.87□□□□□ -1.31
UPK3B-203ENST00000394849 LCE3AQ5TA76 89 aa6.87□□□□□ -1.31
UPK3B-203ENST00000394849 A6NED7 52 aa6.85□□□□□ -1.31
UPK3B-203ENST00000394849 KRTAP4-3Q9BYR4 195 aa6.83□□□□□ -1.32
UPK3B-203ENST00000394849 SPRR5A0A1B0GTR4 108 aa6.74□□□□□ -1.33
UPK3B-203ENST00000394849 KRTAP20-2Q3LI61 65 aa6.72□□□□□ -1.33
UPK3B-203ENST00000394849 KRTAP25-1Q3LHN0 102 aa6.71□□□□□ -1.34
UPK3B-203ENST00000394849 SVIPQ8NHG7 77 aa6.71□□□□□ -1.34
UPK3B-203ENST00000394849 KRTAP12-3P60328 96 aa6.61□□□□□ -1.35
UPK3B-203ENST00000394849 KRTAP12-4P60329 112 aa6.58□□□□□ -1.36
UPK3B-203ENST00000394849 CDC42SE1Q9NRR8 79 aa6.56□□□□□ -1.36
UPK3B-203ENST00000394849 KRTAP5-5Q701N2 237 aaPredicted RBP6.52□□□□□ -1.37
UPK3B-203ENST00000394849 KRTAP4-7Q9BYR0 210 aa6.49□□□□□ -1.37
UPK3B-203ENST00000394849 ROMO1P60602 79 aa6.45□□□□□ -1.38
UPK3B-203ENST00000394849 KRTAP23-1A1A580 65 aa6.44□□□□□ -1.38
UPK3B-203ENST00000394849 SYNE1Q8NF91 8797 aaKnown RBP6.31□□□□□ -1.4
UPK3B-203ENST00000394849 KRTAP4-11Q9BYQ6 195 aa6.3□□□□□ -1.4
UPK3B-203ENST00000394849 KRTAP15-1Q3LI76 137 aa6.26□□□□□ -1.41
UPK3B-203ENST00000394849 KRTAP19-4Q3LI73 84 aa6.23□□□□□ -1.41
UPK3B-203ENST00000394849 AHNAKQ09666 5890 aaKnown RBP6.21□□□□□ -1.41
UPK3B-203ENST00000394849 LOC100996750A0A140TA64 210 aa6.19□□□□□ -1.42
UPK3B-203ENST00000394849 MUC5ACP98088 5654 aa6.15□□□□□ -1.43
UPK3B-203ENST00000394849 BRK1Q8WUW1 75 aa6.12□□□□□ -1.43
UPK3B-203ENST00000394849 KRTAP5-2Q701N4 177 aa6.11□□□□□ -1.43
UPK3B-203ENST00000394849 LCE3CQ5T5A8 94 aa6.1□□□□□ -1.43
UPK3B-203ENST00000394849 KRTAP5-8O75690 187 aa6.08□□□□□ -1.44
UPK3B-203ENST00000394849 MUC5BQ9HC84 5762 aaPredicted RBP6.07□□□□□ -1.44
UPK3B-203ENST00000394849 KRTAP9-9Q9BYP9 154 aa5.92□□□□□ -1.46
UPK3B-203ENST00000394849 MT1AP04731 61 aa5.91□□□□□ -1.46
UPK3B-203ENST00000394849 KRTAP6-1Q3LI64 71 aa5.87□□□□□ -1.47
UPK3B-203ENST00000394849 OBSCNQ5VST9 7968 aa5.82□□□□□ -1.48
UPK3B-203ENST00000394849 KRTAP9-4Q9BYQ2 154 aa5.78□□□□□ -1.48
UPK3B-203ENST00000394849 PMAIP1Q13794 54 aa5.76□□□□□ -1.49
UPK3B-203ENST00000394849 KRTAP6-2Q3LI66 62 aa5.74□□□□□ -1.49
UPK3B-203ENST00000394849 KRTAP9-6A8MVA2 160 aa5.71□□□□□ -1.5
UPK3B-203ENST00000394849 PRO0628Q9UI54 55 aa5.66□□□□□ -1.5
UPK3B-203ENST00000394849 KRTAP5-1Q6L8H4 278 aa5.57□□□□□ -1.52
UPK3B-203ENST00000394849 PRAC1Q96KF2 57 aa5.49□□□□□ -1.53
UPK3B-203ENST00000394849 MT3P25713 68 aa5.47□□□□□ -1.53
UPK3B-203ENST00000394849 KTN1-AS1Q86SY8 53 aa5.21□□□□□ -1.58
UPK3B-203ENST00000394849 LCE1EQ5T753 118 aa5.19□□□□□ -1.58
UPK3B-203ENST00000394849 KRTAP4-2Q9BYR5 136 aa4.88□□□□□ -1.63
UPK3B-203ENST00000394849 LCE1BQ5T7P3 118 aa4.85□□□□□ -1.63
UPK3B-203ENST00000394849 LCE1CQ5T751 118 aa4.8□□□□□ -1.64
UPK3B-203ENST00000394849 LUZP6Q538Z0 58 aa4.66□□□□□ -1.66
UPK3B-203ENST00000394849 KRTAP4-12Q9BQ66 201 aa4.6□□□□□ -1.67
UPK3B-203ENST00000394849 H3BS24 57 aa4.55□□□□□ -1.68
UPK3B-203ENST00000394849 LCE1FQ5T754 118 aa4.46□□□□□ -1.7
UPK3B-203ENST00000394849 KRTAP5-11Q6L8G4 156 aa4.45□□□□□ -1.7
UPK3B-203ENST00000394849 LCE3DQ9BYE3 92 aa4.45□□□□□ -1.7
UPK3B-203ENST00000394849 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.3□□□□□ -1.72
UPK3B-203ENST00000394849 PHGR1C9JFL3 82 aa4.26□□□□□ -1.73
UPK3B-203ENST00000394849 LCE3EQ5T5B0 92 aa4.24□□□□□ -1.73
UPK3B-203ENST00000394849 NDUFAF8A1L188 74 aa4.07□□□□□ -1.76
UPK3B-203ENST00000394849 KRTAP21-2Q3LI59 83 aa3.89□□□□□ -1.79
UPK3B-203ENST00000394849 A0A0A0MQY5 61 aa3.87□□□□□ -1.79
UPK3B-203ENST00000394849 MUC19Q7Z5P9 8384 aa3.62□□□□□ -1.83
UPK3B-203ENST00000394849 KRTAP4-4Q9BYR3 166 aa3.59□□□□□ -1.83
UPK3B-203ENST00000394849 INE1O15225 51 aa3.42□□□□□ -1.86
UPK3B-203ENST00000394849 PRM1P04553 51 aa3.32□□□□□ -1.88
UPK3B-203ENST00000394849 KRTAP21-1Q3LI58 79 aa3.28□□□□□ -1.88
UPK3B-203ENST00000394849 MUC16Q8WXI7 14507 aa2.58□□□□□ -2
Retrieved 77 of 20,778 RNA–protein pairs in 405.7 ms