RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 MT1MQ8N339 61 aa6.24□□□□□ -1.41
SNRPA1-202ENST00000394082 MT4P47944 62 aa6.21□□□□□ -1.42
SNRPA1-202ENST00000394082 MT1LQ93083 61 aa6.2□□□□□ -1.42
SNRPA1-202ENST00000394082 KRTAP5-4Q6L8H1 288 aa6.17□□□□□ -1.42
SNRPA1-202ENST00000394082 UQCR11O14957 56 aa6.15□□□□□ -1.42
SNRPA1-202ENST00000394082 AHNAK2Q8IVF2 5795 aa6.1□□□□□ -1.43
SNRPA1-202ENST00000394082 V9GYY9 64 aa6.09□□□□□ -1.43
SNRPA1-202ENST00000394082 KRTAP5-10Q6L8G5 202 aa6.08□□□□□ -1.44
SNRPA1-202ENST00000394082 C10orf95Q9H7T3 257 aa6.04□□□□□ -1.44
SNRPA1-202ENST00000394082 KRTAP4-3Q9BYR4 195 aa6.03□□□□□ -1.44
SNRPA1-202ENST00000394082 MIR22HGQ0VDD5 57 aa6.02□□□□□ -1.45
SNRPA1-202ENST00000394082 LCE3AQ5TA76 89 aa6.02□□□□□ -1.45
SNRPA1-202ENST00000394082 TNP1P09430 55 aa6□□□□□ -1.45
SNRPA1-202ENST00000394082 PSPHP1O15172 72 aa5.99□□□□□ -1.45
SNRPA1-202ENST00000394082 Q1T7F1 81 aa5.99□□□□□ -1.45
SNRPA1-202ENST00000394082 PCP4P48539 62 aa5.94□□□□□ -1.46
SNRPA1-202ENST00000394082 K7ERS5 55 aa5.93□□□□□ -1.46
SNRPA1-202ENST00000394082 KRTAP5-7Q6L8G8 165 aa5.9□□□□□ -1.46
SNRPA1-202ENST00000394082 KRTAP4-12Q9BQ66 201 aa5.89□□□□□ -1.47
SNRPA1-202ENST00000394082 KRTAP5-3Q6L8H2 238 aa5.87□□□□□ -1.47
SNRPA1-202ENST00000394082 RPS28P62857 69 aaKnown RBP5.84□□□□□ -1.47
SNRPA1-202ENST00000394082 A6NED7 52 aa5.83□□□□□ -1.48
SNRPA1-202ENST00000394082 KRTAP12-3P60328 96 aa5.82□□□□□ -1.48
SNRPA1-202ENST00000394082 KRTAP4-7Q9BYR0 210 aa5.81□□□□□ -1.48
SNRPA1-202ENST00000394082 KRTAP20-2Q3LI61 65 aa5.8□□□□□ -1.48
SNRPA1-202ENST00000394082 SPRR5A0A1B0GTR4 108 aa5.79□□□□□ -1.48
SNRPA1-202ENST00000394082 KRTAP5-5Q701N2 237 aaPredicted RBP5.79□□□□□ -1.48
SNRPA1-202ENST00000394082 KRTAP25-1Q3LHN0 102 aa5.75□□□□□ -1.49
SNRPA1-202ENST00000394082 KRTAP9-9Q9BYP9 154 aa5.71□□□□□ -1.5
SNRPA1-202ENST00000394082 KRTAP9-4Q9BYQ2 154 aa5.71□□□□□ -1.5
SNRPA1-202ENST00000394082 KRTAP12-4P60329 112 aa5.7□□□□□ -1.5
SNRPA1-202ENST00000394082 KRTAP19-4Q3LI73 84 aa5.62□□□□□ -1.51
SNRPA1-202ENST00000394082 CDC42SE1Q9NRR8 79 aa5.61□□□□□ -1.51
SNRPA1-202ENST00000394082 SYNE1Q8NF91 8797 aaKnown RBP5.59□□□□□ -1.51
SNRPA1-202ENST00000394082 KRTAP23-1A1A580 65 aa5.52□□□□□ -1.53
SNRPA1-202ENST00000394082 ROMO1P60602 79 aa5.5□□□□□ -1.53
SNRPA1-202ENST00000394082 H3BS24 57 aa5.48□□□□□ -1.53
SNRPA1-202ENST00000394082 KRTAP4-11Q9BYQ6 195 aa5.38□□□□□ -1.55
SNRPA1-202ENST00000394082 KRTAP5-2Q701N4 177 aa5.36□□□□□ -1.55
SNRPA1-202ENST00000394082 KRTAP15-1Q3LI76 137 aa5.35□□□□□ -1.55
SNRPA1-202ENST00000394082 LCE3CQ5T5A8 94 aa5.34□□□□□ -1.55
SNRPA1-202ENST00000394082 MT1AP04731 61 aa5.28□□□□□ -1.56
SNRPA1-202ENST00000394082 KRTAP4-2Q9BYR5 136 aa5.27□□□□□ -1.57
SNRPA1-202ENST00000394082 KRTAP6-1Q3LI64 71 aa5.23□□□□□ -1.57
SNRPA1-202ENST00000394082 KRTAP5-8O75690 187 aa5.2□□□□□ -1.58
SNRPA1-202ENST00000394082 BRK1Q8WUW1 75 aa5.2□□□□□ -1.58
SNRPA1-202ENST00000394082 SVIPQ8NHG7 77 aa5.16□□□□□ -1.58
SNRPA1-202ENST00000394082 MUC5ACP98088 5654 aa5.1□□□□□ -1.59
SNRPA1-202ENST00000394082 OBSCNQ5VST9 7968 aa5.1□□□□□ -1.59
SNRPA1-202ENST00000394082 MUC5BQ9HC84 5762 aaPredicted RBP5.08□□□□□ -1.6
SNRPA1-202ENST00000394082 AHNAKQ09666 5890 aaKnown RBP5.07□□□□□ -1.6
SNRPA1-202ENST00000394082 KRTAP6-2Q3LI66 62 aa5.06□□□□□ -1.6
SNRPA1-202ENST00000394082 KRTAP9-6A8MVA2 160 aa5.02□□□□□ -1.61
SNRPA1-202ENST00000394082 PMAIP1Q13794 54 aa4.89□□□□□ -1.63
SNRPA1-202ENST00000394082 MT3P25713 68 aa4.86□□□□□ -1.63
SNRPA1-202ENST00000394082 KRTAP5-1Q6L8H4 278 aa4.84□□□□□ -1.63
SNRPA1-202ENST00000394082 PRAC1Q96KF2 57 aa4.65□□□□□ -1.67
SNRPA1-202ENST00000394082 PRO0628Q9UI54 55 aa4.65□□□□□ -1.67
SNRPA1-202ENST00000394082 LCE1EQ5T753 118 aa4.58□□□□□ -1.68
SNRPA1-202ENST00000394082 KTN1-AS1Q86SY8 53 aa4.43□□□□□ -1.7
SNRPA1-202ENST00000394082 LCE1CQ5T751 118 aa4.24□□□□□ -1.73
SNRPA1-202ENST00000394082 LCE1BQ5T7P3 118 aa4.24□□□□□ -1.73
SNRPA1-202ENST00000394082 LUZP6Q538Z0 58 aa3.98□□□□□ -1.77
SNRPA1-202ENST00000394082 LCE1FQ5T754 118 aa3.86□□□□□ -1.79
SNRPA1-202ENST00000394082 KRTAP5-11Q6L8G4 156 aa3.86□□□□□ -1.79
SNRPA1-202ENST00000394082 A0A0A0MQY5 61 aa3.84□□□□□ -1.79
SNRPA1-202ENST00000394082 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.84□□□□□ -1.79
SNRPA1-202ENST00000394082 LCE3DQ9BYE3 92 aa3.81□□□□□ -1.8
SNRPA1-202ENST00000394082 LCE3EQ5T5B0 92 aa3.61□□□□□ -1.83
SNRPA1-202ENST00000394082 PHGR1C9JFL3 82 aa3.52□□□□□ -1.85
SNRPA1-202ENST00000394082 KRTAP21-2Q3LI59 83 aa3.48□□□□□ -1.85
SNRPA1-202ENST00000394082 NDUFAF8A1L188 74 aa3.3□□□□□ -1.88
SNRPA1-202ENST00000394082 KRTAP4-4Q9BYR3 166 aa3.14□□□□□ -1.91
SNRPA1-202ENST00000394082 MUC19Q7Z5P9 8384 aa3.14□□□□□ -1.91
SNRPA1-202ENST00000394082 PRM1P04553 51 aa2.82□□□□□ -1.96
SNRPA1-202ENST00000394082 KRTAP21-1Q3LI58 79 aa2.72□□□□□ -1.97
SNRPA1-202ENST00000394082 INE1O15225 51 aa2.69□□□□□ -1.98
SNRPA1-202ENST00000394082 MUC16Q8WXI7 14507 aa2.24□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 106.6 ms