RNA–Protein interactions for RNA: ENST00000393794.4

POLR2J-202, Transcript of RNA polymerase II subunit J, humanhuman

TSL 1 (best) BASIC

Gene POLR2J, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J-202ENST00000393794 A0A1B0GU33 70 aa7.07□□□□□ -1.28
POLR2J-202ENST00000393794 LOC100996750A0A140TA64 210 aa7.06□□□□□ -1.28
POLR2J-202ENST00000393794 KRTAP13-4Q3LI77 160 aa7.06□□□□□ -1.28
POLR2J-202ENST00000393794 CAMK2N1Q7Z7J9 78 aa7.04□□□□□ -1.28
POLR2J-202ENST00000393794 KRTAP5-3Q6L8H2 238 aa7.03□□□□□ -1.28
POLR2J-202ENST00000393794 MT1LQ93083 61 aa7□□□□□ -1.29
POLR2J-202ENST00000393794 A0A0D9SG42 100 aa6.97□□□□□ -1.29
POLR2J-202ENST00000393794 UQCR11O14957 56 aa6.96□□□□□ -1.3
POLR2J-202ENST00000393794 KRTAP4-3Q9BYR4 195 aa6.96□□□□□ -1.3
POLR2J-202ENST00000393794 PSPHP1O15172 72 aa6.94□□□□□ -1.3
POLR2J-202ENST00000393794 SPATA8Q6RVD6 105 aa6.86□□□□□ -1.31
POLR2J-202ENST00000393794 MIR22HGQ0VDD5 57 aa6.82□□□□□ -1.32
POLR2J-202ENST00000393794 A6NED7 52 aa6.79□□□□□ -1.32
POLR2J-202ENST00000393794 KRTAP20-2Q3LI61 65 aa6.79□□□□□ -1.32
POLR2J-202ENST00000393794 SPRR5A0A1B0GTR4 108 aa6.71□□□□□ -1.34
POLR2J-202ENST00000393794 A8MU10 97 aa6.69□□□□□ -1.34
POLR2J-202ENST00000393794 K7ERS5 55 aa6.67□□□□□ -1.34
POLR2J-202ENST00000393794 KRTAP12-1P59990 96 aa6.67□□□□□ -1.34
POLR2J-202ENST00000393794 SPINT4Q6UDR6 99 aa6.67□□□□□ -1.34
POLR2J-202ENST00000393794 KRTAP5-5Q701N2 237 aaPredicted RBP6.66□□□□□ -1.34
POLR2J-202ENST00000393794 CDC42SE1Q9NRR8 79 aa6.66□□□□□ -1.34
POLR2J-202ENST00000393794 C10orf95Q9H7T3 257 aa6.65□□□□□ -1.34
POLR2J-202ENST00000393794 KRTAP4-7Q9BYR0 210 aa6.62□□□□□ -1.35
POLR2J-202ENST00000393794 LCE3AQ5TA76 89 aa6.6□□□□□ -1.35
POLR2J-202ENST00000393794 SYNE1Q8NF91 8797 aaKnown RBP6.52□□□□□ -1.37
POLR2J-202ENST00000393794 KRTAP12-4P60329 112 aa6.51□□□□□ -1.37
POLR2J-202ENST00000393794 BRK1Q8WUW1 75 aa6.46□□□□□ -1.38
POLR2J-202ENST00000393794 TNP1P09430 55 aa6.38□□□□□ -1.39
POLR2J-202ENST00000393794 KRTAP4-11Q9BYQ6 195 aa6.35□□□□□ -1.39
POLR2J-202ENST00000393794 KRTAP12-3P60328 96 aa6.34□□□□□ -1.39
POLR2J-202ENST00000393794 AHNAKQ09666 5890 aaKnown RBP6.32□□□□□ -1.4
POLR2J-202ENST00000393794 MUC5BQ9HC84 5762 aaPredicted RBP6.29□□□□□ -1.4
POLR2J-202ENST00000393794 MUC5ACP98088 5654 aa6.26□□□□□ -1.41
POLR2J-202ENST00000393794 ROMO1P60602 79 aa6.25□□□□□ -1.41
POLR2J-202ENST00000393794 PRO0628Q9UI54 55 aa6.24□□□□□ -1.41
POLR2J-202ENST00000393794 KRTAP25-1Q3LHN0 102 aa6.23□□□□□ -1.41
POLR2J-202ENST00000393794 KRTAP5-2Q701N4 177 aa6.22□□□□□ -1.41
POLR2J-202ENST00000393794 KRTAP5-8O75690 187 aa6.18□□□□□ -1.42
POLR2J-202ENST00000393794 PMAIP1Q13794 54 aa6.16□□□□□ -1.42
POLR2J-202ENST00000393794 KRTAP23-1A1A580 65 aa6.11□□□□□ -1.43
POLR2J-202ENST00000393794 KRTAP4-12Q9BQ66 201 aa6.03□□□□□ -1.44
POLR2J-202ENST00000393794 KRTAP19-4Q3LI73 84 aa6.02□□□□□ -1.45
POLR2J-202ENST00000393794 KRTAP9-9Q9BYP9 154 aa5.99□□□□□ -1.45
POLR2J-202ENST00000393794 KRTAP9-4Q9BYQ2 154 aa5.99□□□□□ -1.45
POLR2J-202ENST00000393794 OBSCNQ5VST9 7968 aa5.98□□□□□ -1.45
POLR2J-202ENST00000393794 KRTAP6-1Q3LI64 71 aa5.95□□□□□ -1.46
POLR2J-202ENST00000393794 MT1AP04731 61 aa5.94□□□□□ -1.46
POLR2J-202ENST00000393794 LCE3CQ5T5A8 94 aa5.8□□□□□ -1.48
POLR2J-202ENST00000393794 KTN1-AS1Q86SY8 53 aa5.8□□□□□ -1.48
POLR2J-202ENST00000393794 KRTAP6-2Q3LI66 62 aa5.78□□□□□ -1.48
POLR2J-202ENST00000393794 KRTAP15-1Q3LI76 137 aa5.72□□□□□ -1.49
POLR2J-202ENST00000393794 KRTAP5-1Q6L8H4 278 aa5.69□□□□□ -1.5
POLR2J-202ENST00000393794 PRAC1Q96KF2 57 aa5.65□□□□□ -1.5
POLR2J-202ENST00000393794 KRTAP9-6A8MVA2 160 aa5.57□□□□□ -1.52
POLR2J-202ENST00000393794 KRTAP4-2Q9BYR5 136 aa5.5□□□□□ -1.53
POLR2J-202ENST00000393794 MT3P25713 68 aa5.44□□□□□ -1.54
POLR2J-202ENST00000393794 SVIPQ8NHG7 77 aa5.41□□□□□ -1.54
POLR2J-202ENST00000393794 LCE1EQ5T753 118 aa5.2□□□□□ -1.58
POLR2J-202ENST00000393794 LUZP6Q538Z0 58 aa4.87□□□□□ -1.63
POLR2J-202ENST00000393794 LCE1CQ5T751 118 aa4.83□□□□□ -1.64
POLR2J-202ENST00000393794 LCE1BQ5T7P3 118 aa4.83□□□□□ -1.64
POLR2J-202ENST00000393794 KRTAP5-11Q6L8G4 156 aa4.53□□□□□ -1.68
POLR2J-202ENST00000393794 LCE1FQ5T754 118 aa4.45□□□□□ -1.7
POLR2J-202ENST00000393794 NDUFAF8A1L188 74 aa4.38□□□□□ -1.71
POLR2J-202ENST00000393794 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.36□□□□□ -1.71
POLR2J-202ENST00000393794 PHGR1C9JFL3 82 aa4.24□□□□□ -1.73
POLR2J-202ENST00000393794 H3BS24 57 aa4.09□□□□□ -1.75
POLR2J-202ENST00000393794 LCE3DQ9BYE3 92 aa4.03□□□□□ -1.76
POLR2J-202ENST00000393794 KRTAP21-2Q3LI59 83 aa3.97□□□□□ -1.77
POLR2J-202ENST00000393794 A0A0A0MQY5 61 aa3.91□□□□□ -1.78
POLR2J-202ENST00000393794 LCE3EQ5T5B0 92 aa3.89□□□□□ -1.79
POLR2J-202ENST00000393794 INE1O15225 51 aa3.77□□□□□ -1.81
POLR2J-202ENST00000393794 MUC19Q7Z5P9 8384 aa3.73□□□□□ -1.81
POLR2J-202ENST00000393794 KRTAP4-4Q9BYR3 166 aa3.65□□□□□ -1.83
POLR2J-202ENST00000393794 KRTAP21-1Q3LI58 79 aa3.25□□□□□ -1.89
POLR2J-202ENST00000393794 PRM1P04553 51 aa3.17□□□□□ -1.9
POLR2J-202ENST00000393794 MUC16Q8WXI7 14507 aa2.57□□□□□ -2
Retrieved 77 of 20,778 RNA–protein pairs in 11.9 ms