RNA–Protein interactions for RNA: ENST00000393577.7

HMGA2-202, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3 BASIC

Gene HMGA2, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-202ENST00000393577 V9GYY9 64 aa8.09□□□□□ -1.11
HMGA2-202ENST00000393577 KRTAP4-9Q9BYQ8 210 aa8.06□□□□□ -1.12
HMGA2-202ENST00000393577 Q1T7F1 81 aa8.04□□□□□ -1.12
HMGA2-202ENST00000393577 KRTAP12-3P60328 96 aa8.03□□□□□ -1.12
HMGA2-202ENST00000393577 KRTAP4-3Q9BYR4 195 aa8.03□□□□□ -1.12
HMGA2-202ENST00000393577 K7ERS5 55 aa8.01□□□□□ -1.13
HMGA2-202ENST00000393577 KRTAP25-1Q3LHN0 102 aa7.97□□□□□ -1.13
HMGA2-202ENST00000393577 LCE1DQ5T752 114 aa7.88□□□□□ -1.15
HMGA2-202ENST00000393577 LCE4AQ5TA78 99 aa7.88□□□□□ -1.15
HMGA2-202ENST00000393577 KRTAP4-7Q9BYR0 210 aa7.87□□□□□ -1.15
HMGA2-202ENST00000393577 MT4P47944 62 aa7.82□□□□□ -1.16
HMGA2-202ENST00000393577 A6NED7 52 aa7.81□□□□□ -1.16
HMGA2-202ENST00000393577 KRTAP5-4Q6L8H1 288 aa7.75□□□□□ -1.17
HMGA2-202ENST00000393577 HMCN1Q96RW7 5635 aa7.72□□□□□ -1.17
HMGA2-202ENST00000393577 GPR98Q8WXG9 6306 aa7.71□□□□□ -1.18
HMGA2-202ENST00000393577 KRTAP23-1A1A580 65 aa7.65□□□□□ -1.18
HMGA2-202ENST00000393577 RPS28P62857 69 aaKnown RBP7.64□□□□□ -1.19
HMGA2-202ENST00000393577 PCP4P48539 62 aa7.61□□□□□ -1.19
HMGA2-202ENST00000393577 CDC42SE1Q9NRR8 79 aa7.61□□□□□ -1.19
HMGA2-202ENST00000393577 KRTAP4-6Q9BYQ5 205 aa7.59□□□□□ -1.19
HMGA2-202ENST00000393577 KRTAP19-4Q3LI73 84 aa7.52□□□□□ -1.21
HMGA2-202ENST00000393577 KRTAP15-1Q3LI76 137 aa7.52□□□□□ -1.21
HMGA2-202ENST00000393577 KRTAP5-5Q701N2 237 aaPredicted RBP7.5□□□□□ -1.21
HMGA2-202ENST00000393577 LOC100996750A0A140TA64 210 aa7.49□□□□□ -1.21
HMGA2-202ENST00000393577 ROMO1P60602 79 aa7.48□□□□□ -1.21
HMGA2-202ENST00000393577 AHNAK2Q8IVF2 5795 aa7.42□□□□□ -1.22
HMGA2-202ENST00000393577 LCE3CQ5T5A8 94 aa7.4□□□□□ -1.22
HMGA2-202ENST00000393577 KRTAP20-2Q3LI61 65 aa7.33□□□□□ -1.24
HMGA2-202ENST00000393577 SPRR5A0A1B0GTR4 108 aa7.28□□□□□ -1.24
HMGA2-202ENST00000393577 KRTAP12-4P60329 112 aa7.28□□□□□ -1.24
HMGA2-202ENST00000393577 KRTAP5-10Q6L8G5 202 aa7.26□□□□□ -1.25
HMGA2-202ENST00000393577 SYNE1Q8NF91 8797 aaKnown RBP7.17□□□□□ -1.26
HMGA2-202ENST00000393577 KRTAP5-3Q6L8H2 238 aa7.13□□□□□ -1.27
HMGA2-202ENST00000393577 MT1AP04731 61 aa7.02□□□□□ -1.29
HMGA2-202ENST00000393577 KRTAP9-6A8MVA2 160 aa6.99□□□□□ -1.29
HMGA2-202ENST00000393577 KRTAP6-1Q3LI64 71 aa6.98□□□□□ -1.29
HMGA2-202ENST00000393577 KRTAP5-7Q6L8G8 165 aa6.96□□□□□ -1.3
HMGA2-202ENST00000393577 KRTAP5-2Q701N4 177 aa6.81□□□□□ -1.32
HMGA2-202ENST00000393577 KRTAP9-4Q9BYQ2 154 aa6.77□□□□□ -1.33
HMGA2-202ENST00000393577 BRK1Q8WUW1 75 aa6.76□□□□□ -1.33
HMGA2-202ENST00000393577 KRTAP4-12Q9BQ66 201 aa6.72□□□□□ -1.33
HMGA2-202ENST00000393577 H3BS24 57 aa6.67□□□□□ -1.34
HMGA2-202ENST00000393577 KRTAP4-11Q9BYQ6 195 aa6.66□□□□□ -1.34
HMGA2-202ENST00000393577 KRTAP6-2Q3LI66 62 aa6.65□□□□□ -1.34
HMGA2-202ENST00000393577 KRTAP9-9Q9BYP9 154 aa6.47□□□□□ -1.37
HMGA2-202ENST00000393577 KRTAP5-8O75690 187 aa6.44□□□□□ -1.38
HMGA2-202ENST00000393577 MT3P25713 68 aa6.41□□□□□ -1.38
HMGA2-202ENST00000393577 OBSCNQ5VST9 7968 aa6.36□□□□□ -1.39
HMGA2-202ENST00000393577 PMAIP1Q13794 54 aa6.33□□□□□ -1.4
HMGA2-202ENST00000393577 PRAC1Q96KF2 57 aa6.14□□□□□ -1.43
HMGA2-202ENST00000393577 KRTAP5-1Q6L8H4 278 aa6.1□□□□□ -1.43
HMGA2-202ENST00000393577 MUC5BQ9HC84 5762 aaPredicted RBP6.06□□□□□ -1.44
HMGA2-202ENST00000393577 MUC5ACP98088 5654 aa6.03□□□□□ -1.44
HMGA2-202ENST00000393577 AHNAKQ09666 5890 aaKnown RBP6.02□□□□□ -1.45
HMGA2-202ENST00000393577 PRO0628Q9UI54 55 aa5.86□□□□□ -1.47
HMGA2-202ENST00000393577 LCE1EQ5T753 118 aa5.85□□□□□ -1.47
HMGA2-202ENST00000393577 KRTAP4-2Q9BYR5 136 aa5.83□□□□□ -1.48
HMGA2-202ENST00000393577 KTN1-AS1Q86SY8 53 aa5.63□□□□□ -1.51
HMGA2-202ENST00000393577 LCE1BQ5T7P3 118 aa5.55□□□□□ -1.52
HMGA2-202ENST00000393577 SVIPQ8NHG7 77 aa5.44□□□□□ -1.54
HMGA2-202ENST00000393577 LCE1CQ5T751 118 aa5.43□□□□□ -1.54
HMGA2-202ENST00000393577 LCE3DQ9BYE3 92 aa5.35□□□□□ -1.55
HMGA2-202ENST00000393577 LUZP6Q538Z0 58 aa5.16□□□□□ -1.58
HMGA2-202ENST00000393577 LCE3EQ5T5B0 92 aa5.04□□□□□ -1.6
HMGA2-202ENST00000393577 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.95□□□□□ -1.62
HMGA2-202ENST00000393577 KRTAP5-11Q6L8G4 156 aa4.92□□□□□ -1.62
HMGA2-202ENST00000393577 LCE1FQ5T754 118 aa4.75□□□□□ -1.65
HMGA2-202ENST00000393577 KRTAP21-2Q3LI59 83 aa4.58□□□□□ -1.68
HMGA2-202ENST00000393577 PHGR1C9JFL3 82 aa4.24□□□□□ -1.73
HMGA2-202ENST00000393577 KRTAP4-4Q9BYR3 166 aa4.22□□□□□ -1.73
HMGA2-202ENST00000393577 NDUFAF8A1L188 74 aa4.13□□□□□ -1.75
HMGA2-202ENST00000393577 A0A0A0MQY5 61 aa3.96□□□□□ -1.78
HMGA2-202ENST00000393577 MUC19Q7Z5P9 8384 aa3.89□□□□□ -1.79
HMGA2-202ENST00000393577 PRM1P04553 51 aa3.85□□□□□ -1.79
HMGA2-202ENST00000393577 INE1O15225 51 aa3.28□□□□□ -1.88
HMGA2-202ENST00000393577 KRTAP21-1Q3LI58 79 aa3.2□□□□□ -1.9
HMGA2-202ENST00000393577 MUC16Q8WXI7 14507 aa2.77□□□□□ -1.97
Retrieved 77 of 20,778 RNA–protein pairs in 598.2 ms