RNA–Protein interactions for RNA: ENST00000392415.6

UBE2E3-201, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene UBE2E3, Length 1,347 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-201ENST00000392415 KRTAP12-3P60328 96 aa7.11□□□□□ -1.27
UBE2E3-201ENST00000392415 KRTAP4-3Q9BYR4 195 aa7.11□□□□□ -1.27
UBE2E3-201ENST00000392415 V9GYY9 64 aa7.09□□□□□ -1.27
UBE2E3-201ENST00000392415 LCE4AQ5TA78 99 aa7.07□□□□□ -1.28
UBE2E3-201ENST00000392415 Q1T7F1 81 aa7.05□□□□□ -1.28
UBE2E3-201ENST00000392415 PSPHP1O15172 72 aa7.04□□□□□ -1.28
UBE2E3-201ENST00000392415 LCE1DQ5T752 114 aa7.04□□□□□ -1.28
UBE2E3-201ENST00000392415 KRTAP25-1Q3LHN0 102 aa7.03□□□□□ -1.28
UBE2E3-201ENST00000392415 K7ERS5 55 aa7.02□□□□□ -1.28
UBE2E3-201ENST00000392415 KRTAP4-7Q9BYR0 210 aa6.97□□□□□ -1.29
UBE2E3-201ENST00000392415 KRTAP5-4Q6L8H1 288 aa6.96□□□□□ -1.3
UBE2E3-201ENST00000392415 MT4P47944 62 aa6.95□□□□□ -1.3
UBE2E3-201ENST00000392415 HMCN1Q96RW7 5635 aa6.94□□□□□ -1.3
UBE2E3-201ENST00000392415 GPR98Q8WXG9 6306 aa6.87□□□□□ -1.31
UBE2E3-201ENST00000392415 KRTAP23-1A1A580 65 aa6.8□□□□□ -1.32
UBE2E3-201ENST00000392415 A6NED7 52 aa6.8□□□□□ -1.32
UBE2E3-201ENST00000392415 KRTAP4-6Q9BYQ5 205 aa6.78□□□□□ -1.32
UBE2E3-201ENST00000392415 KRTAP19-4Q3LI73 84 aa6.76□□□□□ -1.33
UBE2E3-201ENST00000392415 SVIPQ8NHG7 77 aa6.72□□□□□ -1.33
UBE2E3-201ENST00000392415 KRTAP5-5Q701N2 237 aaPredicted RBP6.71□□□□□ -1.34
UBE2E3-201ENST00000392415 RPS28P62857 69 aaKnown RBP6.69□□□□□ -1.34
UBE2E3-201ENST00000392415 KRTAP15-1Q3LI76 137 aa6.66□□□□□ -1.34
UBE2E3-201ENST00000392415 CDC42SE1Q9NRR8 79 aa6.66□□□□□ -1.34
UBE2E3-201ENST00000392415 AHNAK2Q8IVF2 5795 aa6.65□□□□□ -1.35
UBE2E3-201ENST00000392415 LOC100996750A0A140TA64 210 aa6.61□□□□□ -1.35
UBE2E3-201ENST00000392415 ROMO1P60602 79 aa6.57□□□□□ -1.36
UBE2E3-201ENST00000392415 PCP4P48539 62 aa6.56□□□□□ -1.36
UBE2E3-201ENST00000392415 LCE3CQ5T5A8 94 aa6.55□□□□□ -1.36
UBE2E3-201ENST00000392415 H3BS24 57 aa6.54□□□□□ -1.36
UBE2E3-201ENST00000392415 KRTAP20-2Q3LI61 65 aa6.54□□□□□ -1.36
UBE2E3-201ENST00000392415 SPRR5A0A1B0GTR4 108 aa6.53□□□□□ -1.36
UBE2E3-201ENST00000392415 KRTAP5-10Q6L8G5 202 aa6.53□□□□□ -1.36
UBE2E3-201ENST00000392415 KRTAP12-4P60329 112 aa6.5□□□□□ -1.37
UBE2E3-201ENST00000392415 SYNE1Q8NF91 8797 aaKnown RBP6.5□□□□□ -1.37
UBE2E3-201ENST00000392415 KRTAP5-3Q6L8H2 238 aa6.4□□□□□ -1.39
UBE2E3-201ENST00000392415 KRTAP5-7Q6L8G8 165 aa6.26□□□□□ -1.41
UBE2E3-201ENST00000392415 MT1AP04731 61 aa6.24□□□□□ -1.41
UBE2E3-201ENST00000392415 KRTAP9-6A8MVA2 160 aa6.2□□□□□ -1.42
UBE2E3-201ENST00000392415 KRTAP6-1Q3LI64 71 aa6.2□□□□□ -1.42
UBE2E3-201ENST00000392415 KRTAP5-2Q701N4 177 aa6.1□□□□□ -1.43
UBE2E3-201ENST00000392415 KRTAP9-4Q9BYQ2 154 aa6.03□□□□□ -1.44
UBE2E3-201ENST00000392415 KRTAP4-11Q9BYQ6 195 aa5.97□□□□□ -1.45
UBE2E3-201ENST00000392415 KRTAP6-2Q3LI66 62 aa5.91□□□□□ -1.46
UBE2E3-201ENST00000392415 BRK1Q8WUW1 75 aa5.83□□□□□ -1.48
UBE2E3-201ENST00000392415 KRTAP5-8O75690 187 aa5.77□□□□□ -1.49
UBE2E3-201ENST00000392415 KRTAP4-12Q9BQ66 201 aa5.74□□□□□ -1.49
UBE2E3-201ENST00000392415 OBSCNQ5VST9 7968 aa5.72□□□□□ -1.49
UBE2E3-201ENST00000392415 MT3P25713 68 aa5.71□□□□□ -1.5
UBE2E3-201ENST00000392415 KRTAP9-9Q9BYP9 154 aa5.67□□□□□ -1.5
UBE2E3-201ENST00000392415 PMAIP1Q13794 54 aa5.49□□□□□ -1.53
UBE2E3-201ENST00000392415 MUC5BQ9HC84 5762 aaPredicted RBP5.47□□□□□ -1.53
UBE2E3-201ENST00000392415 KRTAP5-1Q6L8H4 278 aa5.47□□□□□ -1.53
UBE2E3-201ENST00000392415 MUC5ACP98088 5654 aa5.43□□□□□ -1.54
UBE2E3-201ENST00000392415 AHNAKQ09666 5890 aaKnown RBP5.4□□□□□ -1.54
UBE2E3-201ENST00000392415 PRAC1Q96KF2 57 aa5.28□□□□□ -1.56
UBE2E3-201ENST00000392415 LCE1EQ5T753 118 aa5.25□□□□□ -1.57
UBE2E3-201ENST00000392415 KRTAP4-2Q9BYR5 136 aa5.17□□□□□ -1.58
UBE2E3-201ENST00000392415 PRO0628Q9UI54 55 aa5.04□□□□□ -1.6
UBE2E3-201ENST00000392415 LCE1BQ5T7P3 118 aa4.9□□□□□ -1.63
UBE2E3-201ENST00000392415 LCE1CQ5T751 118 aa4.87□□□□□ -1.63
UBE2E3-201ENST00000392415 KTN1-AS1Q86SY8 53 aa4.85□□□□□ -1.63
UBE2E3-201ENST00000392415 A0A0A0MQY5 61 aa4.84□□□□□ -1.63
UBE2E3-201ENST00000392415 LCE3DQ9BYE3 92 aa4.73□□□□□ -1.65
UBE2E3-201ENST00000392415 LUZP6Q538Z0 58 aa4.47□□□□□ -1.69
UBE2E3-201ENST00000392415 LCE3EQ5T5B0 92 aa4.46□□□□□ -1.7
UBE2E3-201ENST00000392415 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.45□□□□□ -1.7
UBE2E3-201ENST00000392415 KRTAP5-11Q6L8G4 156 aa4.41□□□□□ -1.7
UBE2E3-201ENST00000392415 LCE1FQ5T754 118 aa4.29□□□□□ -1.72
UBE2E3-201ENST00000392415 KRTAP21-2Q3LI59 83 aa4.1□□□□□ -1.75
UBE2E3-201ENST00000392415 PHGR1C9JFL3 82 aa3.8□□□□□ -1.8
UBE2E3-201ENST00000392415 NDUFAF8A1L188 74 aa3.72□□□□□ -1.81
UBE2E3-201ENST00000392415 KRTAP4-4Q9BYR3 166 aa3.71□□□□□ -1.81
UBE2E3-201ENST00000392415 MUC19Q7Z5P9 8384 aa3.54□□□□□ -1.84
UBE2E3-201ENST00000392415 PRM1P04553 51 aa3.36□□□□□ -1.87
UBE2E3-201ENST00000392415 INE1O15225 51 aa3.04□□□□□ -1.92
UBE2E3-201ENST00000392415 KRTAP21-1Q3LI58 79 aa2.88□□□□□ -1.95
UBE2E3-201ENST00000392415 MUC16Q8WXI7 14507 aa2.53□□□□□ -2
Retrieved 77 of 20,778 RNA–protein pairs in 72.8 ms