RNA–Protein interactions for RNA: ENST00000390879.1

SNORA48.1-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 135 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.1-201ENST00000390879 LINC01590Q5TEZ4 76 aa-0.58□□□□□ -2.5
SNORA48.1-201ENST00000390879 RPL39LQ96EH5 51 aaKnown RBP-0.58□□□□□ -2.5
SNORA48.1-201ENST00000390879 SAMD9LQ8IVG5 1584 aa-0.58□□□□□ -2.5
SNORA48.1-201ENST00000390879 ATMQ13315 3056 aa-0.58□□□□□ -2.5
SNORA48.1-201ENST00000390879 ATP7AQ04656 1500 aa-0.59□□□□□ -2.5
SNORA48.1-201ENST00000390879 MT1BP07438 61 aa-0.59□□□□□ -2.5
SNORA48.1-201ENST00000390879 CRYBG3Q68DQ2 2970 aa-0.59□□□□□ -2.5
SNORA48.1-201ENST00000390879 ZFHX4Q86UP3 3567 aa-0.6□□□□□ -2.5
SNORA48.1-201ENST00000390879 PRUNE2Q8WUY3 3088 aa-0.6□□□□□ -2.51
SNORA48.1-201ENST00000390879 FREM2Q5SZK8 3169 aa-0.6□□□□□ -2.51
SNORA48.1-201ENST00000390879 BOD1L1Q8NFC6 3051 aa-0.61□□□□□ -2.51
SNORA48.1-201ENST00000390879 CFAP54Q96N23 3096 aa-0.62□□□□□ -2.51
SNORA48.1-201ENST00000390879 KRTAP20-1Q3LI63 56 aa-0.63□□□□□ -2.51
SNORA48.1-201ENST00000390879 RHPN1-AS1Q9BWJ2 59 aa-0.64□□□□□ -2.51
SNORA48.1-201ENST00000390879 TOP2AP11388 1531 aaKnown RBP-0.64□□□□□ -2.51
SNORA48.1-201ENST00000390879 DUOX1Q9NRD9 1551 aa-0.65□□□□□ -2.51
SNORA48.1-201ENST00000390879 DEFB104AQ8WTQ1 72 aa-0.65□□□□□ -2.51
SNORA48.1-201ENST00000390879 A0A096LNI7 61 aa-0.66□□□□□ -2.52
SNORA48.1-201ENST00000390879 RPS29P62273 56 aaKnown RBP-0.66□□□□□ -2.52
SNORA48.1-201ENST00000390879 FRYLO94915 3013 aa-0.67□□□□□ -2.52
SNORA48.1-201ENST00000390879 VPS13CQ709C8 3753 aa-0.67□□□□□ -2.52
SNORA48.1-201ENST00000390879 MYO15AQ9UKN7 3530 aa-0.68□□□□□ -2.52
SNORA48.1-201ENST00000390879 CEP250Q9BV73 2442 aa-0.68□□□□□ -2.52
SNORA48.1-201ENST00000390879 PCNTO95613 3336 aa-0.69□□□□□ -2.52
SNORA48.1-201ENST00000390879 MT1FP04733 61 aa-0.69□□□□□ -2.52
SNORA48.1-201ENST00000390879 HTN1P15515 57 aa-0.7□□□□□ -2.52
SNORA48.1-201ENST00000390879 SPEGQ15772 3267 aa-0.7□□□□□ -2.52
SNORA48.1-201ENST00000390879 CEP350Q5VT06 3117 aa-0.71□□□□□ -2.52
SNORA48.1-201ENST00000390879 DEFB133Q30KQ1 61 aa-0.71□□□□□ -2.52
SNORA48.1-201ENST00000390879 SNRPGP62308 76 aaKnown RBP-0.72□□□□□ -2.52
SNORA48.1-201ENST00000390879 WDFY3Q8IZQ1 3526 aa-0.72□□□□□ -2.53
SNORA48.1-201ENST00000390879 DMDP11532 3685 aa-0.73□□□□□ -2.53
SNORA48.1-201ENST00000390879 MROH2BQ7Z745 1585 aa-0.74□□□□□ -2.53
SNORA48.1-201ENST00000390879 KRTAP19-6Q3LI70 58 aa-0.76□□□□□ -2.53
SNORA48.1-201ENST00000390879 CENPEQ02224 2701 aa-0.76□□□□□ -2.53
SNORA48.1-201ENST00000390879 SZT2Q5T011 3432 aa-0.77□□□□□ -2.53
SNORA48.1-201ENST00000390879 WDFY4Q6ZS81 3184 aa-0.77□□□□□ -2.53
SNORA48.1-201ENST00000390879 TTTY10Q9BZA0 68 aa-0.78□□□□□ -2.53
SNORA48.1-201ENST00000390879 EP400Q96L91 3159 aa-0.79□□□□□ -2.54
SNORA48.1-201ENST00000390879 DEFB124Q8NES8 71 aa-0.79□□□□□ -2.54
SNORA48.1-201ENST00000390879 DCHS1Q96JQ0 3298 aa-0.8□□□□□ -2.54
SNORA48.1-201ENST00000390879 MUC3AQ02505 3323 aa-0.81□□□□□ -2.54
SNORA48.1-201ENST00000390879 CD52P31358 61 aa-0.81□□□□□ -2.54
SNORA48.1-201ENST00000390879 ARHGAP5-AS1Q96IT6 56 aa-0.81□□□□□ -2.54
SNORA48.1-201ENST00000390879 K7EIM0 57 aa-0.83□□□□□ -2.54
SNORA48.1-201ENST00000390879 CFAP47Q6ZTR5 3102 aa-0.84□□□□□ -2.54
SNORA48.1-201ENST00000390879 MKI67P46013 3256 aaKnown RBP-0.84□□□□□ -2.54
SNORA48.1-201ENST00000390879 DNAH12Q6ZR08 3092 aa-0.84□□□□□ -2.54
SNORA48.1-201ENST00000390879 H3BUX3 64 aa-0.85□□□□□ -2.55
SNORA48.1-201ENST00000390879 UNC80Q8N2C7 3258 aa-0.85□□□□□ -2.55
SNORA48.1-201ENST00000390879 XIRP2A4UGR9 3374 aa-0.86□□□□□ -2.55
SNORA48.1-201ENST00000390879 PRCDQ00LT1 54 aa-0.86□□□□□ -2.55
SNORA48.1-201ENST00000390879 USP34Q70CQ2 3546 aa-0.86□□□□□ -2.55
SNORA48.1-201ENST00000390879 DNAH14Q0VDD8 3507 aa-0.87□□□□□ -2.55
SNORA48.1-201ENST00000390879 LOC400499M0QZD8 3231 aa-0.88□□□□□ -2.55
SNORA48.1-201ENST00000390879 KRTAP19-2Q3LHN2 52 aa-0.89□□□□□ -2.55
SNORA48.1-201ENST00000390879 CENPFP49454 3210 aa-0.9□□□□□ -2.55
SNORA48.1-201ENST00000390879 VCANP13611 3396 aa-0.91□□□□□ -2.55
SNORA48.1-201ENST00000390879 H3BSH0 61 aa-0.92□□□□□ -2.56
SNORA48.1-201ENST00000390879 GCC2Q8IWJ2 1684 aa-0.92□□□□□ -2.56
SNORA48.1-201ENST00000390879 LINC01556Q5JQF7 62 aa-0.93□□□□□ -2.56
SNORA48.1-201ENST00000390879 ASPMQ8IZT6 3477 aa-0.94□□□□□ -2.56
SNORA48.1-201ENST00000390879 TMEM167AQ8TBQ9 72 aa-0.96□□□□□ -2.56
SNORA48.1-201ENST00000390879 BRCA2P51587 3418 aa-0.96□□□□□ -2.56
SNORA48.1-201ENST00000390879 CDH23Q9H251 3354 aa-0.97□□□□□ -2.56
SNORA48.1-201ENST00000390879 VPS13AQ96RL7 3174 aa-1□□□□□ -2.57
SNORA48.1-201ENST00000390879 A0A096LPF7 62 aa-1□□□□□ -2.57
SNORA48.1-201ENST00000390879 APELAP0DMC3 54 aa-1□□□□□ -2.57
SNORA48.1-201ENST00000390879 RPL39P5Q59GN2 51 aa-1.01□□□□□ -2.57
SNORA48.1-201ENST00000390879 DEFB108AA8MXU0 73 aa-1.04□□□□□ -2.58
SNORA48.1-201ENST00000390879 UTRNP46939 3433 aa-1.1□□□□□ -2.59
SNORA48.1-201ENST00000390879 HTN3P15516 51 aa-1.15□□□□□ -2.59
SNORA48.1-201ENST00000390879 Q9Y3F1 56 aa-1.23□□□□□ -2.61
SNORA48.1-201ENST00000390879 GOLGB1Q14789 3259 aaKnown RBP-1.23□□□□□ -2.61
SNORA48.1-201ENST00000390879 DEFB108BQ8NET1 73 aa-1.29□□□□□ -2.62
SNORA48.1-201ENST00000390879 COX14Q96I36 57 aa-1.37□□□□□ -2.63
SNORA48.1-201ENST00000390879 STATHP02808 62 aa-1.47□□□□□ -2.64
Retrieved 77 of 20,778 RNA–protein pairs in 11.7 ms