RNA–Protein interactions for RNA: ENST00000390735.2

MIR550A3-201, Transcript of microRNA 550a-3, humanhuman

BASIC

Gene MIR550A3, Length 95 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR550A3-201ENST00000390735 KRTAP25-1Q3LHN0 102 aa1.33□□□□□ -2.2
MIR550A3-201ENST00000390735 LCE3CQ5T5A8 94 aa1.33□□□□□ -2.2
MIR550A3-201ENST00000390735 ATP5EP2Q5VTU8 51 aa1.33□□□□□ -2.2
MIR550A3-201ENST00000390735 KRTAP4-12Q9BQ66 201 aa1.31□□□□□ -2.2
MIR550A3-201ENST00000390735 KRTAP4-2Q9BYR5 136 aa1.31□□□□□ -2.2
MIR550A3-201ENST00000390735 SCGB1A1P11684 91 aa1.3□□□□□ -2.2
MIR550A3-201ENST00000390735 LCE1BQ5T7P3 118 aa1.3□□□□□ -2.2
MIR550A3-201ENST00000390735 A0A1B0GU33 70 aa1.28□□□□□ -2.2
MIR550A3-201ENST00000390735 PHGR1C9JFL3 82 aa1.28□□□□□ -2.2
MIR550A3-201ENST00000390735 KRTAP9-6A8MVA2 160 aa1.27□□□□□ -2.21
MIR550A3-201ENST00000390735 KRTAP15-1Q3LI76 137 aa1.27□□□□□ -2.21
MIR550A3-201ENST00000390735 SERP1Q9Y6X1 66 aa1.27□□□□□ -2.21
MIR550A3-201ENST00000390735 SEC61GP60059 68 aa1.26□□□□□ -2.21
MIR550A3-201ENST00000390735 ETDBQ3ZM63 59 aa1.26□□□□□ -2.21
MIR550A3-201ENST00000390735 LCE1CQ5T751 118 aa1.26□□□□□ -2.21
MIR550A3-201ENST00000390735 KRTAP5-11Q6L8G4 156 aa1.26□□□□□ -2.21
MIR550A3-201ENST00000390735 SMIM26A0A096LP01 95 aa1.24□□□□□ -2.21
MIR550A3-201ENST00000390735 A8MU10 97 aa1.24□□□□□ -2.21
MIR550A3-201ENST00000390735 FAM240AA0A1B0GVK7 77 aa1.22□□□□□ -2.21
MIR550A3-201ENST00000390735 F8W1H4 67 aa1.22□□□□□ -2.21
MIR550A3-201ENST00000390735 LCE1FQ5T754 118 aa1.22□□□□□ -2.21
MIR550A3-201ENST00000390735 LINC00643Q86TS7 51 aa1.22□□□□□ -2.21
MIR550A3-201ENST00000390735 GTF2H5Q6ZYL4 71 aa1.17□□□□□ -2.22
MIR550A3-201ENST00000390735 SPANXA2-OT1Q8N9U9 137 aa1.16□□□□□ -2.22
MIR550A3-201ENST00000390735 SERP2Q8N6R1 65 aa1.15□□□□□ -2.23
MIR550A3-201ENST00000390735 COL5A1-AS1Q5SY13 56 aa1.14□□□□□ -2.23
MIR550A3-201ENST00000390735 SMIM6P0DI80 62 aa1.13□□□□□ -2.23
MIR550A3-201ENST00000390735 COA5Q86WW8 74 aa1.13□□□□□ -2.23
MIR550A3-201ENST00000390735 TMA7Q9Y2S6 64 aaKnown RBP1.13□□□□□ -2.23
MIR550A3-201ENST00000390735 KRTAP23-1A1A580 65 aa1.12□□□□□ -2.23
MIR550A3-201ENST00000390735 A0A1B0GU69 56 aa1.1□□□□□ -2.23
MIR550A3-201ENST00000390735 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.1□□□□□ -2.23
MIR550A3-201ENST00000390735 SNURFQ9Y675 71 aa1.1□□□□□ -2.23
MIR550A3-201ENST00000390735 H7BZZ5 65 aa1.09□□□□□ -2.23
MIR550A3-201ENST00000390735 SMIM20Q8N5G0 67 aa1.07□□□□□ -2.24
MIR550A3-201ENST00000390735 MUC19Q7Z5P9 8384 aa1.06□□□□□ -2.24
MIR550A3-201ENST00000390735 PRR15LQ9BU68 103 aa1.05□□□□□ -2.24
MIR550A3-201ENST00000390735 KRTAP21-2Q3LI59 83 aa0.99□□□□□ -2.25
MIR550A3-201ENST00000390735 KRTAP21-1Q3LI58 79 aa0.98□□□□□ -2.25
MIR550A3-201ENST00000390735 RPS28P62857 69 aaKnown RBP0.97□□□□□ -2.25
MIR550A3-201ENST00000390735 KRTAP4-4Q9BYR3 166 aa0.96□□□□□ -2.26
MIR550A3-201ENST00000390735 UQCR11O14957 56 aa0.92□□□□□ -2.26
MIR550A3-201ENST00000390735 J3QR89 54 aa0.91□□□□□ -2.26
MIR550A3-201ENST00000390735 K7ERS5 55 aa0.91□□□□□ -2.26
MIR550A3-201ENST00000390735 LCE3DQ9BYE3 92 aa0.89□□□□□ -2.27
MIR550A3-201ENST00000390735 LOC105371267A0A1B0GV96 52 aa0.88□□□□□ -2.27
MIR550A3-201ENST00000390735 MIR22HGQ0VDD5 57 aa0.86□□□□□ -2.27
MIR550A3-201ENST00000390735 LINC01558Q9Y6Z2 57 aa0.86□□□□□ -2.27
MIR550A3-201ENST00000390735 PCP4L1A6NKN8 68 aa0.81□□□□□ -2.28
MIR550A3-201ENST00000390735 CDC42SE1Q9NRR8 79 aa0.81□□□□□ -2.28
MIR550A3-201ENST00000390735 A0A1B0GV90 55 aa0.78□□□□□ -2.28
MIR550A3-201ENST00000390735 COX7CP15954 63 aa0.78□□□□□ -2.28
MIR550A3-201ENST00000390735 ROMO1P60602 79 aa0.78□□□□□ -2.28
MIR550A3-201ENST00000390735 Q1T7F1 81 aa0.78□□□□□ -2.28
MIR550A3-201ENST00000390735 LCE3EQ5T5B0 92 aa0.77□□□□□ -2.29
MIR550A3-201ENST00000390735 MUC16Q8WXI7 14507 aa0.72□□□□□ -2.29
MIR550A3-201ENST00000390735 K7ERU9 68 aa0.7□□□□□ -2.3
MIR550A3-201ENST00000390735 ATP5EP56381 51 aaPredicted RBP0.66□□□□□ -2.3
MIR550A3-201ENST00000390735 PSPHP1O15172 72 aa0.64□□□□□ -2.31
MIR550A3-201ENST00000390735 A6NED7 52 aa0.59□□□□□ -2.31
MIR550A3-201ENST00000390735 V9GYY9 64 aa0.57□□□□□ -2.32
MIR550A3-201ENST00000390735 CCDC179H3BU77 68 aa0.55□□□□□ -2.32
MIR550A3-201ENST00000390735 ANAPC13Q9BS18 74 aa0.55□□□□□ -2.32
MIR550A3-201ENST00000390735 TMEM258P61165 79 aa0.51□□□□□ -2.33
MIR550A3-201ENST00000390735 PRM1P04553 51 aa0.37□□□□□ -2.35
MIR550A3-201ENST00000390735 BRK1Q8WUW1 75 aa0.21□□□□□ -2.38
MIR550A3-201ENST00000390735 LUZP6Q538Z0 58 aa0.19□□□□□ -2.38
MIR550A3-201ENST00000390735 PRAC1Q96KF2 57 aa0.14□□□□□ -2.39
MIR550A3-201ENST00000390735 PMAIP1Q13794 54 aa0.05□□□□□ -2.4
MIR550A3-201ENST00000390735 SVIPQ8NHG7 77 aa-0.15□□□□□ -2.43
MIR550A3-201ENST00000390735 KTN1-AS1Q86SY8 53 aa-0.22□□□□□ -2.44
MIR550A3-201ENST00000390735 PCP4P48539 62 aa-0.26□□□□□ -2.45
MIR550A3-201ENST00000390735 NDUFAF8A1L188 74 aa-0.28□□□□□ -2.45
MIR550A3-201ENST00000390735 INE1O15225 51 aa-0.32□□□□□ -2.46
MIR550A3-201ENST00000390735 PRO0628Q9UI54 55 aa-0.33□□□□□ -2.46
MIR550A3-201ENST00000390735 A0A0A0MQY5 61 aa-0.49□□□□□ -2.49
MIR550A3-201ENST00000390735 H3BS24 57 aa-1.51□□□□□ -2.65
Retrieved 77 of 20,778 RNA–protein pairs in 8.7 ms