RNA–Protein interactions for RNA: ENST00000390520.1

TRAJ17-201, Transcript of T cell receptor alpha joining 17, humanhuman

APPRIS P1 BASIC

Gene TRAJ17, Length 63 nt, Biotype TR J gene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ17-201ENST00000390520 STARD9Q9P2P6 4700 aa0.68□□□□□ -2.3
TRAJ17-201ENST00000390520 HTN3P15516 51 aa0.66□□□□□ -2.3
TRAJ17-201ENST00000390520 KRTAP5-2Q701N4 177 aa0.66□□□□□ -2.3
TRAJ17-201ENST00000390520 SPRR2FQ96RM1 72 aa0.66□□□□□ -2.3
TRAJ17-201ENST00000390520 HERC1Q15751 4861 aa0.65□□□□□ -2.31
TRAJ17-201ENST00000390520 SPRR2EP22531 72 aa0.64□□□□□ -2.31
TRAJ17-201ENST00000390520 CDH23Q9H251 3354 aa0.63□□□□□ -2.31
TRAJ17-201ENST00000390520 KRTAP5-8O75690 187 aa0.62□□□□□ -2.31
TRAJ17-201ENST00000390520 KRTAP5-9P26371 169 aa0.62□□□□□ -2.31
TRAJ17-201ENST00000390520 LRP2P98164 4655 aa0.62□□□□□ -2.31
TRAJ17-201ENST00000390520 DEFB4AO15263 64 aa0.6□□□□□ -2.31
TRAJ17-201ENST00000390520 KRTAP5-7Q6L8G8 165 aa0.6□□□□□ -2.31
TRAJ17-201ENST00000390520 MT1EP04732 61 aa0.59□□□□□ -2.31
TRAJ17-201ENST00000390520 OBSCNQ5VST9 7968 aa0.59□□□□□ -2.32
TRAJ17-201ENST00000390520 HMCN2Q8NDA2 5059 aa0.57□□□□□ -2.32
TRAJ17-201ENST00000390520 KRTAP5-4Q6L8H1 288 aa0.56□□□□□ -2.32
TRAJ17-201ENST00000390520 MT1LQ93083 61 aa0.54□□□□□ -2.32
TRAJ17-201ENST00000390520 MDN1Q9NU22 5596 aa0.53□□□□□ -2.32
TRAJ17-201ENST00000390520 MT1HP80294 61 aa0.53□□□□□ -2.32
TRAJ17-201ENST00000390520 SPRR2GQ9BYE4 73 aa0.53□□□□□ -2.32
TRAJ17-201ENST00000390520 DNHD1Q96M86 4753 aa0.53□□□□□ -2.33
TRAJ17-201ENST00000390520 FAT4Q6V0I7 4981 aa0.52□□□□□ -2.33
TRAJ17-201ENST00000390520 KRTAP4-1Q9BYQ7 146 aa0.51□□□□□ -2.33
TRAJ17-201ENST00000390520 SSPOA2VEC9 5147 aa0.49□□□□□ -2.33
TRAJ17-201ENST00000390520 KRTAP5-10Q6L8G5 202 aa0.48□□□□□ -2.33
TRAJ17-201ENST00000390520 USH2AO75445 5202 aa0.48□□□□□ -2.33
TRAJ17-201ENST00000390520 KMT2CQ8NEZ4 4911 aaKnown RBP0.47□□□□□ -2.33
TRAJ17-201ENST00000390520 MUC2Q02817 5179 aa0.46□□□□□ -2.34
TRAJ17-201ENST00000390520 MT1XP80297 61 aa0.45□□□□□ -2.34
TRAJ17-201ENST00000390520 FCGBPQ9Y6R7 5405 aaPredicted RBP0.45□□□□□ -2.34
TRAJ17-201ENST00000390520 KRTAP21-2Q3LI59 83 aa0.44□□□□□ -2.34
TRAJ17-201ENST00000390520 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.44□□□□□ -2.34
TRAJ17-201ENST00000390520 BIRC6Q9NR09 4857 aa0.44□□□□□ -2.34
TRAJ17-201ENST00000390520 HERC2O95714 4834 aa0.44□□□□□ -2.34
TRAJ17-201ENST00000390520 MUC5ACP98088 5654 aa0.44□□□□□ -2.34
TRAJ17-201ENST00000390520 KMT2DO14686 5537 aa0.42□□□□□ -2.34
TRAJ17-201ENST00000390520 KRTAP19-8Q3LI54 63 aa0.42□□□□□ -2.34
TRAJ17-201ENST00000390520 RYR1P21817 5038 aa0.42□□□□□ -2.34
TRAJ17-201ENST00000390520 CRCT1Q9UGL9 99 aa0.41□□□□□ -2.34
TRAJ17-201ENST00000390520 UBR4Q5T4S7 5183 aa0.41□□□□□ -2.34
TRAJ17-201ENST00000390520 PCLOQ9Y6V0 5065 aa0.4□□□□□ -2.34
TRAJ17-201ENST00000390520 KRTAP19-7Q3SYF9 63 aa0.39□□□□□ -2.35
TRAJ17-201ENST00000390520 KRTAP4-3Q9BYR4 195 aa0.39□□□□□ -2.35
TRAJ17-201ENST00000390520 RNF213Q63HN8 5207 aa0.37□□□□□ -2.35
TRAJ17-201ENST00000390520 HYDINQ4G0P3 5121 aa0.37□□□□□ -2.35
TRAJ17-201ENST00000390520 MT1GP13640 62 aa0.36□□□□□ -2.35
TRAJ17-201ENST00000390520 KRTAP19-2Q3LHN2 52 aa0.36□□□□□ -2.35
TRAJ17-201ENST00000390520 KRTAP17-1Q9BYP8 105 aa0.36□□□□□ -2.35
TRAJ17-201ENST00000390520 RYR3Q15413 4870 aa0.36□□□□□ -2.35
TRAJ17-201ENST00000390520 KRTAP4-4Q9BYR3 166 aa0.35□□□□□ -2.35
TRAJ17-201ENST00000390520 MUC16Q8WXI7 14507 aa0.35□□□□□ -2.35
TRAJ17-201ENST00000390520 HMCN1Q96RW7 5635 aa0.34□□□□□ -2.35
TRAJ17-201ENST00000390520 PHGR1C9JFL3 82 aa0.33□□□□□ -2.36
TRAJ17-201ENST00000390520 KRTAP6-1Q3LI64 71 aa0.33□□□□□ -2.36
TRAJ17-201ENST00000390520 MT2AP02795 61 aa0.32□□□□□ -2.36
TRAJ17-201ENST00000390520 MT1MQ8N339 61 aa0.32□□□□□ -2.36
TRAJ17-201ENST00000390520 MT1BP07438 61 aa0.31□□□□□ -2.36
TRAJ17-201ENST00000390520 MUC12Q9UKN1 5478 aa0.28□□□□□ -2.36
TRAJ17-201ENST00000390520 MUC5BQ9HC84 5762 aaPredicted RBP0.28□□□□□ -2.37
TRAJ17-201ENST00000390520 EPPK1P58107 5090 aaKnown RBP0.27□□□□□ -2.37
TRAJ17-201ENST00000390520 MT1HL1P0DM35 61 aa0.23□□□□□ -2.37
TRAJ17-201ENST00000390520 KIAA1109Q2LD37 5005 aa0.23□□□□□ -2.37
TRAJ17-201ENST00000390520 MT1FP04733 61 aa0.19□□□□□ -2.38
TRAJ17-201ENST00000390520 RYR2Q92736 4967 aa0.17□□□□□ -2.38
TRAJ17-201ENST00000390520 ABCA13Q86UQ4 5058 aa0.17□□□□□ -2.38
TRAJ17-201ENST00000390520 MT4P47944 62 aa0.05□□□□□ -2.4
TRAJ17-201ENST00000390520 DSTQ03001 7570 aaKnown RBP0.04□□□□□ -2.4
TRAJ17-201ENST00000390520 KRTAP20-2Q3LI61 65 aa0.02□□□□□ -2.41
TRAJ17-201ENST00000390520 AHNAKQ09666 5890 aaKnown RBP-0.07□□□□□ -2.42
TRAJ17-201ENST00000390520 AHNAK2Q8IVF2 5795 aa-0.07□□□□□ -2.42
TRAJ17-201ENST00000390520 FSIP2Q5CZC0 6907 aa-0.07□□□□□ -2.42
TRAJ17-201ENST00000390520 SYNE2Q8WXH0 6885 aaKnown RBP-0.09□□□□□ -2.42
TRAJ17-201ENST00000390520 KRTAP19-6Q3LI70 58 aa-0.16□□□□□ -2.44
TRAJ17-201ENST00000390520 MACF1Q9UPN3 7388 aaKnown RBP-0.16□□□□□ -2.44
TRAJ17-201ENST00000390520 KRTAP20-1Q3LI63 56 aa-0.25□□□□□ -2.45
TRAJ17-201ENST00000390520 NEBP20929 6669 aa-0.26□□□□□ -2.45
TRAJ17-201ENST00000390520 GPR98Q8WXG9 6306 aa-0.28□□□□□ -2.45
Retrieved 77 of 20,778 RNA–protein pairs in 14.2 ms