RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 PKHD1P08F94 4074 aa1.63□□□□□ -2.15
RFX3-204ENST00000382004 DNHD1Q96M86 4753 aa1.61□□□□□ -2.15
RFX3-204ENST00000382004 KRTAP20-1Q3LI63 56 aa1.61□□□□□ -2.15
RFX3-204ENST00000382004 KRTAP6-2Q3LI66 62 aa1.61□□□□□ -2.15
RFX3-204ENST00000382004 HSPG2P98160 4391 aa1.59□□□□□ -2.16
RFX3-204ENST00000382004 LCE4AQ5TA78 99 aa1.57□□□□□ -2.16
RFX3-204ENST00000382004 BIRC6Q9NR09 4857 aa1.57□□□□□ -2.16
RFX3-204ENST00000382004 RYR3Q15413 4870 aa1.55□□□□□ -2.16
RFX3-204ENST00000382004 KRTAP9-6A0A140TA67 174 aa1.55□□□□□ -2.16
RFX3-204ENST00000382004 TNXBP22105 4242 aa1.54□□□□□ -2.16
RFX3-204ENST00000382004 KRTAP6-1Q3LI64 71 aa1.54□□□□□ -2.16
RFX3-204ENST00000382004 KRTAP19-7Q3SYF9 63 aa1.54□□□□□ -2.16
RFX3-204ENST00000382004 KRTAP19-2Q3LHN2 52 aa1.52□□□□□ -2.17
RFX3-204ENST00000382004 SYNE2Q8WXH0 6885 aaKnown RBP1.52□□□□□ -2.17
RFX3-204ENST00000382004 KRTAP9-7A8MTY7 169 aa1.52□□□□□ -2.17
RFX3-204ENST00000382004 KRTAP9-4Q9BYQ2 154 aa1.52□□□□□ -2.17
RFX3-204ENST00000382004 LRP2P98164 4655 aa1.52□□□□□ -2.17
RFX3-204ENST00000382004 MUC17Q685J3 4493 aa1.5□□□□□ -2.17
RFX3-204ENST00000382004 PCLOQ9Y6V0 5065 aa1.49□□□□□ -2.17
RFX3-204ENST00000382004 KRTAP2-2Q9BYT5 123 aa1.49□□□□□ -2.17
RFX3-204ENST00000382004 SYNE1Q8NF91 8797 aaKnown RBP1.47□□□□□ -2.17
RFX3-204ENST00000382004 HERC2O95714 4834 aa1.46□□□□□ -2.17
RFX3-204ENST00000382004 KMT2CQ8NEZ4 4911 aaKnown RBP1.45□□□□□ -2.18
RFX3-204ENST00000382004 RYR2Q92736 4967 aa1.45□□□□□ -2.18
RFX3-204ENST00000382004 KRTAP9-6A8MVA2 160 aa1.43□□□□□ -2.18
RFX3-204ENST00000382004 LCE2AQ5TA79 106 aaPredicted RBP1.43□□□□□ -2.18
RFX3-204ENST00000382004 KRTAP9-9Q9BYP9 154 aa1.43□□□□□ -2.18
RFX3-204ENST00000382004 KRTAP6-3Q3LI67 103 aa1.42□□□□□ -2.18
RFX3-204ENST00000382004 KRTAP4-11Q9BYQ6 195 aa1.41□□□□□ -2.18
RFX3-204ENST00000382004 OBSCNQ5VST9 7968 aa1.38□□□□□ -2.19
RFX3-204ENST00000382004 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.38□□□□□ -2.19
RFX3-204ENST00000382004 KRTAP20-2Q3LI61 65 aa1.38□□□□□ -2.19
RFX3-204ENST00000382004 KIAA1109Q2LD37 5005 aa1.37□□□□□ -2.19
RFX3-204ENST00000382004 MUC5BQ9HC84 5762 aaPredicted RBP1.36□□□□□ -2.19
RFX3-204ENST00000382004 ABCA13Q86UQ4 5058 aa1.34□□□□□ -2.2
RFX3-204ENST00000382004 HMCN2Q8NDA2 5059 aa1.32□□□□□ -2.2
RFX3-204ENST00000382004 KRTAP4-4Q9BYR3 166 aa1.31□□□□□ -2.2
RFX3-204ENST00000382004 FSIP2Q5CZC0 6907 aa1.3□□□□□ -2.2
RFX3-204ENST00000382004 EPPK1P58107 5090 aaKnown RBP1.29□□□□□ -2.2
RFX3-204ENST00000382004 HYDINQ4G0P3 5121 aa1.27□□□□□ -2.21
RFX3-204ENST00000382004 KRTAP4-6Q9BYQ5 205 aa1.27□□□□□ -2.21
RFX3-204ENST00000382004 KRTAP4-12Q9BQ66 201 aa1.27□□□□□ -2.21
RFX3-204ENST00000382004 KRTAP4-2Q9BYR5 136 aa1.27□□□□□ -2.21
RFX3-204ENST00000382004 MUC2Q02817 5179 aa1.26□□□□□ -2.21
RFX3-204ENST00000382004 RNF213Q63HN8 5207 aa1.19□□□□□ -2.22
RFX3-204ENST00000382004 KRTAP5-2Q701N4 177 aa1.19□□□□□ -2.22
RFX3-204ENST00000382004 UBR4Q5T4S7 5183 aa1.18□□□□□ -2.22
RFX3-204ENST00000382004 FAT4Q6V0I7 4981 aa1.15□□□□□ -2.22
RFX3-204ENST00000382004 MUC19Q7Z5P9 8384 aa1.15□□□□□ -2.23
RFX3-204ENST00000382004 HMCN1Q96RW7 5635 aa1.15□□□□□ -2.23
RFX3-204ENST00000382004 DSTQ03001 7570 aaKnown RBP1.13□□□□□ -2.23
RFX3-204ENST00000382004 MACF1Q9UPN3 7388 aaKnown RBP1.12□□□□□ -2.23
RFX3-204ENST00000382004 FCGBPQ9Y6R7 5405 aaPredicted RBP1.11□□□□□ -2.23
RFX3-204ENST00000382004 KRTAP5-3Q6L8H2 238 aa1.08□□□□□ -2.24
RFX3-204ENST00000382004 SSPOA2VEC9 5147 aa1.07□□□□□ -2.24
RFX3-204ENST00000382004 KRTAP5-5Q701N2 237 aaPredicted RBP1.07□□□□□ -2.24
RFX3-204ENST00000382004 KRTAP5-9P26371 169 aa1.06□□□□□ -2.24
RFX3-204ENST00000382004 USH2AO75445 5202 aa1.06□□□□□ -2.24
RFX3-204ENST00000382004 KRTAP5-4Q6L8H1 288 aa1.06□□□□□ -2.24
RFX3-204ENST00000382004 NEBP20929 6669 aa1.05□□□□□ -2.24
RFX3-204ENST00000382004 KMT2DO14686 5537 aa1.04□□□□□ -2.24
RFX3-204ENST00000382004 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.99□□□□□ -2.25
RFX3-204ENST00000382004 GPR98Q8WXG9 6306 aa0.98□□□□□ -2.25
RFX3-204ENST00000382004 MUC5ACP98088 5654 aa0.96□□□□□ -2.26
RFX3-204ENST00000382004 PHGR1C9JFL3 82 aa0.94□□□□□ -2.26
RFX3-204ENST00000382004 MDN1Q9NU22 5596 aa0.93□□□□□ -2.26
RFX3-204ENST00000382004 AHNAK2Q8IVF2 5795 aa0.87□□□□□ -2.27
RFX3-204ENST00000382004 KRTAP5-8O75690 187 aa0.85□□□□□ -2.27
RFX3-204ENST00000382004 MUC12Q9UKN1 5478 aa0.85□□□□□ -2.27
RFX3-204ENST00000382004 KRTAP5-10Q6L8G5 202 aa0.83□□□□□ -2.28
RFX3-204ENST00000382004 AHNAKQ09666 5890 aaKnown RBP0.79□□□□□ -2.28
RFX3-204ENST00000382004 KRTAP5-1Q6L8H4 278 aa0.76□□□□□ -2.29
RFX3-204ENST00000382004 KRTAP21-1Q3LI58 79 aa0.73□□□□□ -2.29
RFX3-204ENST00000382004 KRTAP5-11Q6L8G4 156 aa0.7□□□□□ -2.3
RFX3-204ENST00000382004 KRTAP21-2Q3LI59 83 aa0.66□□□□□ -2.3
RFX3-204ENST00000382004 KRTAP5-7Q6L8G8 165 aa0.61□□□□□ -2.31
RFX3-204ENST00000382004 MUC16Q8WXI7 14507 aa0.55□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 8.7 ms