RNA–Protein interactions for RNA: ENST00000379472.4

KCNC1-202, Transcript of potassium voltage-gated channel subfamily C member 1, humanhuman

TSL 1 (best) BASIC

Gene KCNC1, Length 7,965 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1-202ENST00000379472 RYR3Q15413 4870 aa4.67□□□□□ -1.66
KCNC1-202ENST00000379472 KRTAP4-3Q9BYR4 195 aa4.66□□□□□ -1.66
KCNC1-202ENST00000379472 LRP2P98164 4655 aa4.56□□□□□ -1.68
KCNC1-202ENST00000379472 KRTAP4-9Q9BYQ8 210 aa4.54□□□□□ -1.68
KCNC1-202ENST00000379472 KRTAP9-7A8MTY7 169 aa4.47□□□□□ -1.69
KCNC1-202ENST00000379472 MT1AP04731 61 aa4.43□□□□□ -1.7
KCNC1-202ENST00000379472 KRTAP2-3P0C7H8 128 aa4.42□□□□□ -1.7
KCNC1-202ENST00000379472 KRTAP2-4Q9BYR9 128 aa4.42□□□□□ -1.7
KCNC1-202ENST00000379472 KRTAP2-1Q9BYU5 128 aa4.41□□□□□ -1.7
KCNC1-202ENST00000379472 SYNE2Q8WXH0 6885 aaKnown RBP4.37□□□□□ -1.71
KCNC1-202ENST00000379472 LCE4AQ5TA78 99 aa4.37□□□□□ -1.71
KCNC1-202ENST00000379472 KRTAP6-2Q3LI66 62 aa4.34□□□□□ -1.72
KCNC1-202ENST00000379472 KMT2CQ8NEZ4 4911 aaKnown RBP4.33□□□□□ -1.72
KCNC1-202ENST00000379472 KIAA1109Q2LD37 5005 aa4.32□□□□□ -1.72
KCNC1-202ENST00000379472 RYR2Q92736 4967 aa4.28□□□□□ -1.72
KCNC1-202ENST00000379472 MUC17Q685J3 4493 aa4.27□□□□□ -1.73
KCNC1-202ENST00000379472 HERC2O95714 4834 aa4.25□□□□□ -1.73
KCNC1-202ENST00000379472 KRTAP9-9Q9BYP9 154 aa4.24□□□□□ -1.73
KCNC1-202ENST00000379472 LCE2AQ5TA79 106 aaPredicted RBP4.23□□□□□ -1.73
KCNC1-202ENST00000379472 KRTAP2-2Q9BYT5 123 aa4.2□□□□□ -1.74
KCNC1-202ENST00000379472 KRTAP19-2Q3LHN2 52 aa4.2□□□□□ -1.74
KCNC1-202ENST00000379472 KRTAP9-4Q9BYQ2 154 aa4.16□□□□□ -1.74
KCNC1-202ENST00000379472 KRTAP6-3Q3LI67 103 aa4.14□□□□□ -1.75
KCNC1-202ENST00000379472 KRTAP6-1Q3LI64 71 aa4.12□□□□□ -1.75
KCNC1-202ENST00000379472 KRTAP19-7Q3SYF9 63 aa4.09□□□□□ -1.76
KCNC1-202ENST00000379472 PCLOQ9Y6V0 5065 aa4.04□□□□□ -1.76
KCNC1-202ENST00000379472 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.03□□□□□ -1.76
KCNC1-202ENST00000379472 HERC1Q15751 4861 aa4.01□□□□□ -1.77
KCNC1-202ENST00000379472 BIRC6Q9NR09 4857 aa3.97□□□□□ -1.77
KCNC1-202ENST00000379472 FSIP2Q5CZC0 6907 aa3.96□□□□□ -1.78
KCNC1-202ENST00000379472 KRTAP20-2Q3LI61 65 aa3.93□□□□□ -1.78
KCNC1-202ENST00000379472 EPPK1P58107 5090 aaKnown RBP3.89□□□□□ -1.79
KCNC1-202ENST00000379472 HMCN2Q8NDA2 5059 aa3.88□□□□□ -1.79
KCNC1-202ENST00000379472 KRTAP9-6A8MVA2 160 aa3.82□□□□□ -1.8
KCNC1-202ENST00000379472 KRTAP4-11Q9BYQ6 195 aa3.77□□□□□ -1.81
KCNC1-202ENST00000379472 SYNE1Q8NF91 8797 aaKnown RBP3.76□□□□□ -1.81
KCNC1-202ENST00000379472 MUC2Q02817 5179 aa3.72□□□□□ -1.81
KCNC1-202ENST00000379472 FAT4Q6V0I7 4981 aa3.72□□□□□ -1.81
KCNC1-202ENST00000379472 ABCA13Q86UQ4 5058 aa3.63□□□□□ -1.83
KCNC1-202ENST00000379472 KRTAP4-4Q9BYR3 166 aa3.6□□□□□ -1.83
KCNC1-202ENST00000379472 KRTAP4-6Q9BYQ5 205 aa3.59□□□□□ -1.83
KCNC1-202ENST00000379472 OBSCNQ5VST9 7968 aa3.59□□□□□ -1.84
KCNC1-202ENST00000379472 UBR4Q5T4S7 5183 aa3.58□□□□□ -1.84
KCNC1-202ENST00000379472 KRTAP4-12Q9BQ66 201 aa3.56□□□□□ -1.84
KCNC1-202ENST00000379472 KRTAP4-2Q9BYR5 136 aa3.56□□□□□ -1.84
KCNC1-202ENST00000379472 RNF213Q63HN8 5207 aa3.51□□□□□ -1.85
KCNC1-202ENST00000379472 KMT2DO14686 5537 aa3.46□□□□□ -1.86
KCNC1-202ENST00000379472 MACF1Q9UPN3 7388 aaKnown RBP3.2□□□□□ -1.9
KCNC1-202ENST00000379472 FCGBPQ9Y6R7 5405 aaPredicted RBP3.17□□□□□ -1.9
KCNC1-202ENST00000379472 DSTQ03001 7570 aaKnown RBP3.14□□□□□ -1.91
KCNC1-202ENST00000379472 USH2AO75445 5202 aa3.03□□□□□ -1.92
KCNC1-202ENST00000379472 KRTAP5-4Q6L8H1 288 aa2.99□□□□□ -1.93
KCNC1-202ENST00000379472 NEBP20929 6669 aa2.98□□□□□ -1.93
KCNC1-202ENST00000379472 KRTAP5-9P26371 169 aa2.97□□□□□ -1.93
KCNC1-202ENST00000379472 SSPOA2VEC9 5147 aa2.93□□□□□ -1.94
KCNC1-202ENST00000379472 KRTAP5-5Q701N2 237 aaPredicted RBP2.91□□□□□ -1.94
KCNC1-202ENST00000379472 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.94
KCNC1-202ENST00000379472 MUC12Q9UKN1 5478 aa2.87□□□□□ -1.95
KCNC1-202ENST00000379472 PHGR1C9JFL3 82 aa2.83□□□□□ -1.96
KCNC1-202ENST00000379472 KRTAP5-3Q6L8H2 238 aa2.62□□□□□ -1.99
KCNC1-202ENST00000379472 MDN1Q9NU22 5596 aa2.61□□□□□ -1.99
KCNC1-202ENST00000379472 GPR98Q8WXG9 6306 aa2.52□□□□□ -2.01
KCNC1-202ENST00000379472 KRTAP5-8O75690 187 aa2.42□□□□□ -2.02
KCNC1-202ENST00000379472 MUC5ACP98088 5654 aa2.33□□□□□ -2.04
KCNC1-202ENST00000379472 KRTAP5-10Q6L8G5 202 aa2.29□□□□□ -2.04
KCNC1-202ENST00000379472 KRTAP5-2Q701N4 177 aa2.21□□□□□ -2.06
KCNC1-202ENST00000379472 HMCN1Q96RW7 5635 aa2.05□□□□□ -2.08
KCNC1-202ENST00000379472 KRTAP5-1Q6L8H4 278 aa2.02□□□□□ -2.09
KCNC1-202ENST00000379472 MUC5BQ9HC84 5762 aaPredicted RBP1.99□□□□□ -2.09
KCNC1-202ENST00000379472 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
KCNC1-202ENST00000379472 KRTAP5-11Q6L8G4 156 aa1.94□□□□□ -2.1
KCNC1-202ENST00000379472 KRTAP21-2Q3LI59 83 aa1.85□□□□□ -2.11
KCNC1-202ENST00000379472 AHNAK2Q8IVF2 5795 aa1.74□□□□□ -2.13
KCNC1-202ENST00000379472 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.66□□□□□ -2.14
KCNC1-202ENST00000379472 AHNAKQ09666 5890 aaKnown RBP1.65□□□□□ -2.14
KCNC1-202ENST00000379472 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
KCNC1-202ENST00000379472 KRTAP5-7Q6L8G8 165 aa1.45□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 51.5 ms