RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 LCE4AQ5TA78 99 aa8.57□□□□□ -1.04
TNFRSF4-201ENST00000379236 LCE1DQ5T752 114 aa8.55□□□□□ -1.04
TNFRSF4-201ENST00000379236 GPR98Q8WXG9 6306 aa8.54□□□□□ -1.04
TNFRSF4-201ENST00000379236 KRTAP4-3Q9BYR4 195 aa8.52□□□□□ -1.05
TNFRSF4-201ENST00000379236 MT4P47944 62 aa8.49□□□□□ -1.05
TNFRSF4-201ENST00000379236 KRTAP12-3P60328 96 aa8.49□□□□□ -1.05
TNFRSF4-201ENST00000379236 MIR22HGQ0VDD5 57 aa8.48□□□□□ -1.05
TNFRSF4-201ENST00000379236 HMCN1Q96RW7 5635 aa8.42□□□□□ -1.06
TNFRSF4-201ENST00000379236 K7ERS5 55 aa8.42□□□□□ -1.06
TNFRSF4-201ENST00000379236 RPS28P62857 69 aaKnown RBP8.42□□□□□ -1.06
TNFRSF4-201ENST00000379236 KRTAP25-1Q3LHN0 102 aa8.36□□□□□ -1.07
TNFRSF4-201ENST00000379236 V9GYY9 64 aa8.33□□□□□ -1.08
TNFRSF4-201ENST00000379236 KRTAP5-4Q6L8H1 288 aa8.32□□□□□ -1.08
TNFRSF4-201ENST00000379236 KRTAP4-7Q9BYR0 210 aa8.32□□□□□ -1.08
TNFRSF4-201ENST00000379236 PSPHP1O15172 72 aa8.27□□□□□ -1.09
TNFRSF4-201ENST00000379236 Q1T7F1 81 aa8.18□□□□□ -1.1
TNFRSF4-201ENST00000379236 KRTAP4-6Q9BYQ5 205 aa8.18□□□□□ -1.1
TNFRSF4-201ENST00000379236 AHNAK2Q8IVF2 5795 aa8.15□□□□□ -1.11
TNFRSF4-201ENST00000379236 A6NED7 52 aa8.03□□□□□ -1.12
TNFRSF4-201ENST00000379236 KRTAP23-1A1A580 65 aa8.01□□□□□ -1.13
TNFRSF4-201ENST00000379236 KRTAP19-4Q3LI73 84 aa8.01□□□□□ -1.13
TNFRSF4-201ENST00000379236 KRTAP5-5Q701N2 237 aaPredicted RBP7.97□□□□□ -1.13
TNFRSF4-201ENST00000379236 KRTAP5-10Q6L8G5 202 aa7.93□□□□□ -1.14
TNFRSF4-201ENST00000379236 KRTAP15-1Q3LI76 137 aa7.92□□□□□ -1.14
TNFRSF4-201ENST00000379236 CDC42SE1Q9NRR8 79 aa7.92□□□□□ -1.14
TNFRSF4-201ENST00000379236 KRTAP12-4P60329 112 aa7.9□□□□□ -1.14
TNFRSF4-201ENST00000379236 KRTAP20-2Q3LI61 65 aa7.9□□□□□ -1.14
TNFRSF4-201ENST00000379236 LOC100996750A0A140TA64 210 aa7.88□□□□□ -1.15
TNFRSF4-201ENST00000379236 SPRR5A0A1B0GTR4 108 aa7.86□□□□□ -1.15
TNFRSF4-201ENST00000379236 LCE3CQ5T5A8 94 aa7.8□□□□□ -1.16
TNFRSF4-201ENST00000379236 KRTAP5-3Q6L8H2 238 aa7.77□□□□□ -1.17
TNFRSF4-201ENST00000379236 ROMO1P60602 79 aa7.75□□□□□ -1.17
TNFRSF4-201ENST00000379236 SYNE1Q8NF91 8797 aaKnown RBP7.67□□□□□ -1.18
TNFRSF4-201ENST00000379236 KRTAP5-7Q6L8G8 165 aa7.64□□□□□ -1.19
TNFRSF4-201ENST00000379236 BRK1Q8WUW1 75 aa7.52□□□□□ -1.21
TNFRSF4-201ENST00000379236 MT1AP04731 61 aa7.47□□□□□ -1.21
TNFRSF4-201ENST00000379236 PRO0628Q9UI54 55 aa7.46□□□□□ -1.22
TNFRSF4-201ENST00000379236 KRTAP6-1Q3LI64 71 aa7.41□□□□□ -1.22
TNFRSF4-201ENST00000379236 KRTAP9-6A8MVA2 160 aa7.28□□□□□ -1.24
TNFRSF4-201ENST00000379236 KRTAP5-2Q701N4 177 aa7.28□□□□□ -1.24
TNFRSF4-201ENST00000379236 KRTAP9-4Q9BYQ2 154 aa7.22□□□□□ -1.25
TNFRSF4-201ENST00000379236 KRTAP4-11Q9BYQ6 195 aa7.22□□□□□ -1.25
TNFRSF4-201ENST00000379236 PMAIP1Q13794 54 aa7.14□□□□□ -1.27
TNFRSF4-201ENST00000379236 KRTAP6-2Q3LI66 62 aa7.11□□□□□ -1.27
TNFRSF4-201ENST00000379236 SVIPQ8NHG7 77 aa7□□□□□ -1.29
TNFRSF4-201ENST00000379236 KRTAP5-8O75690 187 aa6.95□□□□□ -1.3
TNFRSF4-201ENST00000379236 KTN1-AS1Q86SY8 53 aa6.9□□□□□ -1.3
TNFRSF4-201ENST00000379236 MT3P25713 68 aa6.87□□□□□ -1.31
TNFRSF4-201ENST00000379236 OBSCNQ5VST9 7968 aa6.83□□□□□ -1.32
TNFRSF4-201ENST00000379236 KRTAP9-9Q9BYP9 154 aa6.69□□□□□ -1.34
TNFRSF4-201ENST00000379236 MUC5BQ9HC84 5762 aaPredicted RBP6.69□□□□□ -1.34
TNFRSF4-201ENST00000379236 AHNAKQ09666 5890 aaKnown RBP6.69□□□□□ -1.34
TNFRSF4-201ENST00000379236 MUC5ACP98088 5654 aa6.65□□□□□ -1.34
TNFRSF4-201ENST00000379236 PRAC1Q96KF2 57 aa6.57□□□□□ -1.36
TNFRSF4-201ENST00000379236 KRTAP5-1Q6L8H4 278 aa6.53□□□□□ -1.36
TNFRSF4-201ENST00000379236 LCE1EQ5T753 118 aa6.27□□□□□ -1.41
TNFRSF4-201ENST00000379236 LCE1BQ5T7P3 118 aa5.98□□□□□ -1.45
TNFRSF4-201ENST00000379236 KRTAP4-2Q9BYR5 136 aa5.9□□□□□ -1.46
TNFRSF4-201ENST00000379236 LCE1CQ5T751 118 aa5.82□□□□□ -1.48
TNFRSF4-201ENST00000379236 LCE3DQ9BYE3 92 aa5.64□□□□□ -1.51
TNFRSF4-201ENST00000379236 LUZP6Q538Z0 58 aa5.52□□□□□ -1.53
TNFRSF4-201ENST00000379236 KRTAP4-12Q9BQ66 201 aa5.41□□□□□ -1.54
TNFRSF4-201ENST00000379236 NDUFAF8A1L188 74 aa5.31□□□□□ -1.56
TNFRSF4-201ENST00000379236 LCE3EQ5T5B0 92 aa5.3□□□□□ -1.56
TNFRSF4-201ENST00000379236 KRTAP5-11Q6L8G4 156 aa5.28□□□□□ -1.56
TNFRSF4-201ENST00000379236 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.27□□□□□ -1.57
TNFRSF4-201ENST00000379236 LCE1FQ5T754 118 aa5.16□□□□□ -1.58
TNFRSF4-201ENST00000379236 KRTAP21-2Q3LI59 83 aa4.85□□□□□ -1.63
TNFRSF4-201ENST00000379236 A0A0A0MQY5 61 aa4.82□□□□□ -1.64
TNFRSF4-201ENST00000379236 H3BS24 57 aa4.77□□□□□ -1.65
TNFRSF4-201ENST00000379236 PHGR1C9JFL3 82 aa4.68□□□□□ -1.66
TNFRSF4-201ENST00000379236 INE1O15225 51 aa4.53□□□□□ -1.68
TNFRSF4-201ENST00000379236 KRTAP4-4Q9BYR3 166 aa4.5□□□□□ -1.69
TNFRSF4-201ENST00000379236 MUC19Q7Z5P9 8384 aa4.2□□□□□ -1.74
TNFRSF4-201ENST00000379236 PRM1P04553 51 aa3.95□□□□□ -1.78
TNFRSF4-201ENST00000379236 KRTAP21-1Q3LI58 79 aa3.55□□□□□ -1.84
TNFRSF4-201ENST00000379236 MUC16Q8WXI7 14507 aa2.99□□□□□ -1.93
Retrieved 77 of 20,778 RNA–protein pairs in 9.6 ms