RNA–Protein interactions for RNA: ENST00000378543.2

FAAP20-201, Transcript of FA core complex associated protein 20, humanhuman

TSL 2

Gene FAAP20, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-201ENST00000378543 Q1T7F1 81 aa8.38□□□□□ -1.07
FAAP20-201ENST00000378543 MT1MQ8N339 61 aa8.36□□□□□ -1.07
FAAP20-201ENST00000378543 MT1LQ93083 61 aa8.36□□□□□ -1.07
FAAP20-201ENST00000378543 K7ERS5 55 aa8.35□□□□□ -1.07
FAAP20-201ENST00000378543 PSPHP1O15172 72 aa8.28□□□□□ -1.08
FAAP20-201ENST00000378543 KRTAP25-1Q3LHN0 102 aa8.23□□□□□ -1.09
FAAP20-201ENST00000378543 LCE1DQ5T752 114 aa8.22□□□□□ -1.09
FAAP20-201ENST00000378543 KRTAP4-3Q9BYR4 195 aa8.19□□□□□ -1.1
FAAP20-201ENST00000378543 KRTAP12-3P60328 96 aa8.17□□□□□ -1.1
FAAP20-201ENST00000378543 LCE4AQ5TA78 99 aa8.16□□□□□ -1.1
FAAP20-201ENST00000378543 GPR98Q8WXG9 6306 aa8.15□□□□□ -1.11
FAAP20-201ENST00000378543 MT4P47944 62 aa8.11□□□□□ -1.11
FAAP20-201ENST00000378543 RPS28P62857 69 aaKnown RBP8.08□□□□□ -1.12
FAAP20-201ENST00000378543 A6NED7 52 aa8.06□□□□□ -1.12
FAAP20-201ENST00000378543 KRTAP5-4Q6L8H1 288 aa8.02□□□□□ -1.13
FAAP20-201ENST00000378543 KRTAP23-1A1A580 65 aa8□□□□□ -1.13
FAAP20-201ENST00000378543 HMCN1Q96RW7 5635 aa7.98□□□□□ -1.13
FAAP20-201ENST00000378543 KRTAP4-7Q9BYR0 210 aa7.98□□□□□ -1.13
FAAP20-201ENST00000378543 PCP4P48539 62 aa7.96□□□□□ -1.14
FAAP20-201ENST00000378543 KRTAP19-4Q3LI73 84 aa7.92□□□□□ -1.14
FAAP20-201ENST00000378543 KRTAP4-6Q9BYQ5 205 aa7.89□□□□□ -1.15
FAAP20-201ENST00000378543 CDC42SE1Q9NRR8 79 aa7.87□□□□□ -1.15
FAAP20-201ENST00000378543 ROMO1P60602 79 aa7.73□□□□□ -1.17
FAAP20-201ENST00000378543 AHNAK2Q8IVF2 5795 aa7.73□□□□□ -1.17
FAAP20-201ENST00000378543 KRTAP15-1Q3LI76 137 aa7.69□□□□□ -1.18
FAAP20-201ENST00000378543 KRTAP5-10Q6L8G5 202 aa7.67□□□□□ -1.18
FAAP20-201ENST00000378543 KRTAP5-5Q701N2 237 aaPredicted RBP7.67□□□□□ -1.18
FAAP20-201ENST00000378543 KRTAP20-2Q3LI61 65 aa7.57□□□□□ -1.2
FAAP20-201ENST00000378543 LOC100996750A0A140TA64 210 aa7.56□□□□□ -1.2
FAAP20-201ENST00000378543 LCE3CQ5T5A8 94 aa7.54□□□□□ -1.2
FAAP20-201ENST00000378543 SPRR5A0A1B0GTR4 108 aa7.5□□□□□ -1.21
FAAP20-201ENST00000378543 KRTAP5-3Q6L8H2 238 aa7.49□□□□□ -1.21
FAAP20-201ENST00000378543 KRTAP12-4P60329 112 aa7.47□□□□□ -1.21
FAAP20-201ENST00000378543 KRTAP5-7Q6L8G8 165 aa7.37□□□□□ -1.23
FAAP20-201ENST00000378543 SYNE1Q8NF91 8797 aaKnown RBP7.35□□□□□ -1.23
FAAP20-201ENST00000378543 MT1AP04731 61 aa7.11□□□□□ -1.27
FAAP20-201ENST00000378543 KRTAP6-1Q3LI64 71 aa7.09□□□□□ -1.27
FAAP20-201ENST00000378543 KRTAP9-6A8MVA2 160 aa7.02□□□□□ -1.29
FAAP20-201ENST00000378543 KRTAP5-2Q701N4 177 aa7.01□□□□□ -1.29
FAAP20-201ENST00000378543 BRK1Q8WUW1 75 aa7.01□□□□□ -1.29
FAAP20-201ENST00000378543 KRTAP4-11Q9BYQ6 195 aa6.93□□□□□ -1.3
FAAP20-201ENST00000378543 KRTAP9-4Q9BYQ2 154 aa6.88□□□□□ -1.31
FAAP20-201ENST00000378543 KRTAP6-2Q3LI66 62 aa6.78□□□□□ -1.32
FAAP20-201ENST00000378543 KRTAP5-8O75690 187 aa6.71□□□□□ -1.34
FAAP20-201ENST00000378543 PMAIP1Q13794 54 aa6.63□□□□□ -1.35
FAAP20-201ENST00000378543 OBSCNQ5VST9 7968 aa6.56□□□□□ -1.36
FAAP20-201ENST00000378543 MT3P25713 68 aa6.53□□□□□ -1.36
FAAP20-201ENST00000378543 MUC5ACP98088 5654 aa6.36□□□□□ -1.39
FAAP20-201ENST00000378543 KRTAP9-9Q9BYP9 154 aa6.35□□□□□ -1.39
FAAP20-201ENST00000378543 MUC5BQ9HC84 5762 aaPredicted RBP6.35□□□□□ -1.39
FAAP20-201ENST00000378543 AHNAKQ09666 5890 aaKnown RBP6.32□□□□□ -1.4
FAAP20-201ENST00000378543 KRTAP5-1Q6L8H4 278 aa6.31□□□□□ -1.4
FAAP20-201ENST00000378543 PRAC1Q96KF2 57 aa6.26□□□□□ -1.41
FAAP20-201ENST00000378543 PRO0628Q9UI54 55 aa6.24□□□□□ -1.41
FAAP20-201ENST00000378543 LCE1EQ5T753 118 aa6.01□□□□□ -1.45
FAAP20-201ENST00000378543 KTN1-AS1Q86SY8 53 aa5.94□□□□□ -1.46
FAAP20-201ENST00000378543 KRTAP4-2Q9BYR5 136 aa5.69□□□□□ -1.5
FAAP20-201ENST00000378543 LCE1BQ5T7P3 118 aa5.66□□□□□ -1.5
FAAP20-201ENST00000378543 SVIPQ8NHG7 77 aa5.64□□□□□ -1.51
FAAP20-201ENST00000378543 LCE1CQ5T751 118 aa5.56□□□□□ -1.52
FAAP20-201ENST00000378543 LCE3DQ9BYE3 92 aa5.47□□□□□ -1.53
FAAP20-201ENST00000378543 LUZP6Q538Z0 58 aa5.45□□□□□ -1.54
FAAP20-201ENST00000378543 KRTAP4-12Q9BQ66 201 aa5.2□□□□□ -1.58
FAAP20-201ENST00000378543 LCE3EQ5T5B0 92 aa5.18□□□□□ -1.58
FAAP20-201ENST00000378543 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.09□□□□□ -1.59
FAAP20-201ENST00000378543 KRTAP5-11Q6L8G4 156 aa5.04□□□□□ -1.6
FAAP20-201ENST00000378543 LCE1FQ5T754 118 aa4.91□□□□□ -1.62
FAAP20-201ENST00000378543 KRTAP21-2Q3LI59 83 aa4.66□□□□□ -1.66
FAAP20-201ENST00000378543 PHGR1C9JFL3 82 aa4.47□□□□□ -1.69
FAAP20-201ENST00000378543 NDUFAF8A1L188 74 aa4.31□□□□□ -1.72
FAAP20-201ENST00000378543 KRTAP4-4Q9BYR3 166 aa4.31□□□□□ -1.72
FAAP20-201ENST00000378543 MUC19Q7Z5P9 8384 aa4.05□□□□□ -1.76
FAAP20-201ENST00000378543 PRM1P04553 51 aa3.9□□□□□ -1.79
FAAP20-201ENST00000378543 INE1O15225 51 aa3.6□□□□□ -1.83
FAAP20-201ENST00000378543 A0A0A0MQY5 61 aa3.52□□□□□ -1.85
FAAP20-201ENST00000378543 KRTAP21-1Q3LI58 79 aa3.38□□□□□ -1.87
FAAP20-201ENST00000378543 MUC16Q8WXI7 14507 aa2.83□□□□□ -1.96
FAAP20-201ENST00000378543 H3BS24 57 aa1.74□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 82 ms