RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 FAT3Q8TDW7 4589 aa1.52□□□□□ -2.17
SCN2A-202ENST00000375427 BIRC6Q9NR09 4857 aa1.52□□□□□ -2.17
SCN2A-202ENST00000375427 FAT4Q6V0I7 4981 aa1.52□□□□□ -2.17
SCN2A-202ENST00000375427 LCE2AQ5TA79 106 aaPredicted RBP1.52□□□□□ -2.17
SCN2A-202ENST00000375427 KRTAP9-3Q9BYQ3 159 aa1.52□□□□□ -2.17
SCN2A-202ENST00000375427 DNAH5Q8TE73 4624 aa1.51□□□□□ -2.17
SCN2A-202ENST00000375427 SYNE1Q8NF91 8797 aaKnown RBP1.51□□□□□ -2.17
SCN2A-202ENST00000375427 DYNC1H1Q14204 4646 aaKnown RBP1.51□□□□□ -2.17
SCN2A-202ENST00000375427 KRTAP4-7Q9BYR0 210 aa1.5□□□□□ -2.17
SCN2A-202ENST00000375427 HERC2O95714 4834 aa1.5□□□□□ -2.17
SCN2A-202ENST00000375427 TNXBP22105 4242 aa1.5□□□□□ -2.17
SCN2A-202ENST00000375427 KRTAP19-6Q3LI70 58 aa1.5□□□□□ -2.17
SCN2A-202ENST00000375427 HMCN2Q8NDA2 5059 aa1.49□□□□□ -2.17
SCN2A-202ENST00000375427 SACSQ9NZJ4 4579 aa1.49□□□□□ -2.17
SCN2A-202ENST00000375427 HERC1Q15751 4861 aa1.49□□□□□ -2.17
SCN2A-202ENST00000375427 FAT1Q14517 4588 aa1.49□□□□□ -2.17
SCN2A-202ENST00000375427 LOC100996750A0A140TA64 210 aa1.49□□□□□ -2.17
SCN2A-202ENST00000375427 PLECQ15149 4684 aaKnown RBP1.49□□□□□ -2.17
SCN2A-202ENST00000375427 DNAH9Q9NYC9 4486 aa1.48□□□□□ -2.17
SCN2A-202ENST00000375427 KRTAP4-9Q9BYQ8 210 aa1.48□□□□□ -2.17
SCN2A-202ENST00000375427 APOBP04114 4563 aaKnown RBP1.47□□□□□ -2.17
SCN2A-202ENST00000375427 KRTAP9-7A8MTY7 169 aa1.44□□□□□ -2.18
SCN2A-202ENST00000375427 SYNE2Q8WXH0 6885 aaKnown RBP1.44□□□□□ -2.18
SCN2A-202ENST00000375427 KRTAP9-2Q9BYQ4 174 aa1.44□□□□□ -2.18
SCN2A-202ENST00000375427 STARD9Q9P2P6 4700 aa1.42□□□□□ -2.18
SCN2A-202ENST00000375427 KRTAP9-6A0A140TA67 174 aa1.41□□□□□ -2.18
SCN2A-202ENST00000375427 KRTAP9-9Q9BYP9 154 aa1.4□□□□□ -2.18
SCN2A-202ENST00000375427 KRTAP9-4Q9BYQ2 154 aa1.4□□□□□ -2.19
SCN2A-202ENST00000375427 KRTAP4-11Q9BYQ6 195 aa1.4□□□□□ -2.19
SCN2A-202ENST00000375427 USH2AO75445 5202 aa1.39□□□□□ -2.19
SCN2A-202ENST00000375427 KRTAP20-2Q3LI61 65 aa1.37□□□□□ -2.19
SCN2A-202ENST00000375427 MUC2Q02817 5179 aa1.36□□□□□ -2.19
SCN2A-202ENST00000375427 FSIP2Q5CZC0 6907 aa1.36□□□□□ -2.19
SCN2A-202ENST00000375427 KRTAP9-6A8MVA2 160 aa1.35□□□□□ -2.19
SCN2A-202ENST00000375427 KRTAP4-3Q9BYR4 195 aa1.35□□□□□ -2.19
SCN2A-202ENST00000375427 LRP2P98164 4655 aa1.33□□□□□ -2.2
SCN2A-202ENST00000375427 KRTAP6-3Q3LI67 103 aa1.33□□□□□ -2.2
SCN2A-202ENST00000375427 KRTAP19-2Q3LHN2 52 aa1.33□□□□□ -2.2
SCN2A-202ENST00000375427 KRTAP20-1Q3LI63 56 aa1.32□□□□□ -2.2
SCN2A-202ENST00000375427 MUC17Q685J3 4493 aa1.31□□□□□ -2.2
SCN2A-202ENST00000375427 SSPOA2VEC9 5147 aa1.3□□□□□ -2.2
SCN2A-202ENST00000375427 KRTAP6-1Q3LI64 71 aa1.3□□□□□ -2.2
SCN2A-202ENST00000375427 LPAP08519 4548 aa1.27□□□□□ -2.21
SCN2A-202ENST00000375427 KMT2DO14686 5537 aa1.25□□□□□ -2.21
SCN2A-202ENST00000375427 DSTQ03001 7570 aaKnown RBP1.22□□□□□ -2.21
SCN2A-202ENST00000375427 GPR98Q8WXG9 6306 aa1.18□□□□□ -2.22
SCN2A-202ENST00000375427 MUC5BQ9HC84 5762 aaPredicted RBP1.17□□□□□ -2.22
SCN2A-202ENST00000375427 FCGBPQ9Y6R7 5405 aaPredicted RBP1.17□□□□□ -2.22
SCN2A-202ENST00000375427 MDN1Q9NU22 5596 aa1.16□□□□□ -2.22
SCN2A-202ENST00000375427 MUC19Q7Z5P9 8384 aa1.14□□□□□ -2.23
SCN2A-202ENST00000375427 KRTAP4-4Q9BYR3 166 aa1.14□□□□□ -2.23
SCN2A-202ENST00000375427 KRTAP5-9P26371 169 aa1.13□□□□□ -2.23
SCN2A-202ENST00000375427 MUC12Q9UKN1 5478 aa1.11□□□□□ -2.23
SCN2A-202ENST00000375427 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.11□□□□□ -2.23
SCN2A-202ENST00000375427 KRTAP5-2Q701N4 177 aa1.09□□□□□ -2.24
SCN2A-202ENST00000375427 MACF1Q9UPN3 7388 aaKnown RBP1.08□□□□□ -2.24
SCN2A-202ENST00000375427 MUC5ACP98088 5654 aa1.07□□□□□ -2.24
SCN2A-202ENST00000375427 KRTAP5-5Q701N2 237 aaPredicted RBP1.07□□□□□ -2.24
SCN2A-202ENST00000375427 HMCN1Q96RW7 5635 aa1.06□□□□□ -2.24
SCN2A-202ENST00000375427 KRTAP4-6Q9BYQ5 205 aa1.06□□□□□ -2.24
SCN2A-202ENST00000375427 KRTAP5-4Q6L8H1 288 aa1.02□□□□□ -2.25
SCN2A-202ENST00000375427 KRTAP4-12Q9BQ66 201 aa1.02□□□□□ -2.25
SCN2A-202ENST00000375427 KRTAP4-2Q9BYR5 136 aa1.02□□□□□ -2.25
SCN2A-202ENST00000375427 NEBP20929 6669 aa1.02□□□□□ -2.25
SCN2A-202ENST00000375427 AHNAKQ09666 5890 aaKnown RBP1□□□□□ -2.25
SCN2A-202ENST00000375427 AHNAK2Q8IVF2 5795 aa1□□□□□ -2.25
SCN2A-202ENST00000375427 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.95□□□□□ -2.26
SCN2A-202ENST00000375427 KRTAP5-3Q6L8H2 238 aa0.91□□□□□ -2.26
SCN2A-202ENST00000375427 KRTAP21-1Q3LI58 79 aa0.91□□□□□ -2.26
SCN2A-202ENST00000375427 PHGR1C9JFL3 82 aa0.85□□□□□ -2.27
SCN2A-202ENST00000375427 KRTAP5-8O75690 187 aa0.83□□□□□ -2.28
SCN2A-202ENST00000375427 KRTAP5-11Q6L8G4 156 aa0.8□□□□□ -2.28
SCN2A-202ENST00000375427 KRTAP5-7Q6L8G8 165 aa0.78□□□□□ -2.28
SCN2A-202ENST00000375427 KRTAP5-10Q6L8G5 202 aa0.77□□□□□ -2.29
SCN2A-202ENST00000375427 KRTAP5-1Q6L8H4 278 aa0.76□□□□□ -2.29
SCN2A-202ENST00000375427 MUC16Q8WXI7 14507 aa0.67□□□□□ -2.3
SCN2A-202ENST00000375427 KRTAP21-2Q3LI59 83 aa0.61□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 134.4 ms