RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 KRTAP4-8Q9BYQ9 185 aa6.76□□□□□ -1.33
PFDN6-201ENST00000374606 GPR98Q8WXG9 6306 aa6.74□□□□□ -1.33
PFDN6-201ENST00000374606 LCE3AQ5TA76 89 aa6.71□□□□□ -1.34
PFDN6-201ENST00000374606 LCE3BQ5TA77 95 aa6.7□□□□□ -1.34
PFDN6-201ENST00000374606 SVIPQ8NHG7 77 aa6.66□□□□□ -1.34
PFDN6-201ENST00000374606 KRTAP23-1A1A580 65 aa6.64□□□□□ -1.35
PFDN6-201ENST00000374606 PP632Q6XCG6 107 aa6.59□□□□□ -1.35
PFDN6-201ENST00000374606 KTN1-AS1Q86SY8 53 aa6.54□□□□□ -1.36
PFDN6-201ENST00000374606 KRTAP19-5Q3LI72 72 aa6.52□□□□□ -1.37
PFDN6-201ENST00000374606 KRTAP19-7Q3SYF9 63 aa6.5□□□□□ -1.37
PFDN6-201ENST00000374606 PRAC1Q96KF2 57 aa6.49□□□□□ -1.37
PFDN6-201ENST00000374606 KRTAP12-3P60328 96 aa6.45□□□□□ -1.38
PFDN6-201ENST00000374606 MT1EP04732 61 aa6.42□□□□□ -1.38
PFDN6-201ENST00000374606 DSTQ03001 7570 aaKnown RBP6.38□□□□□ -1.39
PFDN6-201ENST00000374606 KRTAP4-9Q9BYQ8 210 aa6.36□□□□□ -1.39
PFDN6-201ENST00000374606 LOC100996750A0A140TA64 210 aa6.33□□□□□ -1.4
PFDN6-201ENST00000374606 KRTAP4-6Q9BYQ5 205 aa6.33□□□□□ -1.4
PFDN6-201ENST00000374606 KRTAP19-4Q3LI73 84 aa6.3□□□□□ -1.4
PFDN6-201ENST00000374606 MT1LQ93083 61 aa6.25□□□□□ -1.41
PFDN6-201ENST00000374606 KRTAP15-1Q3LI76 137 aa6.24□□□□□ -1.41
PFDN6-201ENST00000374606 KRTAP19-3Q7Z4W3 81 aa6.24□□□□□ -1.41
PFDN6-201ENST00000374606 LCE5AQ5TCM9 118 aa6.16□□□□□ -1.42
PFDN6-201ENST00000374606 MT1GP13640 62 aa6.15□□□□□ -1.42
PFDN6-201ENST00000374606 LCE1DQ5T752 114 aa6.15□□□□□ -1.42
PFDN6-201ENST00000374606 HMCN1Q96RW7 5635 aa6.13□□□□□ -1.43
PFDN6-201ENST00000374606 AHNAK2Q8IVF2 5795 aa6.1□□□□□ -1.43
PFDN6-201ENST00000374606 MT1MQ8N339 61 aa6.07□□□□□ -1.44
PFDN6-201ENST00000374606 MT4P47944 62 aa6.02□□□□□ -1.45
PFDN6-201ENST00000374606 LCE4AQ5TA78 99 aa6.02□□□□□ -1.45
PFDN6-201ENST00000374606 KRTAP4-12Q9BQ66 201 aa6□□□□□ -1.45
PFDN6-201ENST00000374606 LCE3CQ5T5A8 94 aa5.99□□□□□ -1.45
PFDN6-201ENST00000374606 KRTAP5-10Q6L8G5 202 aa5.98□□□□□ -1.45
PFDN6-201ENST00000374606 KRTAP4-7Q9BYR0 210 aa5.97□□□□□ -1.45
PFDN6-201ENST00000374606 KRTAP4-3Q9BYR4 195 aa5.91□□□□□ -1.46
PFDN6-201ENST00000374606 KRTAP5-7Q6L8G8 165 aa5.83□□□□□ -1.48
PFDN6-201ENST00000374606 KRTAP5-4Q6L8H1 288 aa5.79□□□□□ -1.48
PFDN6-201ENST00000374606 KRTAP5-3Q6L8H2 238 aa5.72□□□□□ -1.49
PFDN6-201ENST00000374606 A0A0A0MQY5 61 aa5.69□□□□□ -1.5
PFDN6-201ENST00000374606 SPRR5A0A1B0GTR4 108 aa5.68□□□□□ -1.5
PFDN6-201ENST00000374606 KRTAP9-9Q9BYP9 154 aa5.64□□□□□ -1.51
PFDN6-201ENST00000374606 KRTAP9-4Q9BYQ2 154 aa5.64□□□□□ -1.51
PFDN6-201ENST00000374606 KRTAP9-6A8MVA2 160 aa5.62□□□□□ -1.51
PFDN6-201ENST00000374606 KRTAP20-2Q3LI61 65 aa5.51□□□□□ -1.53
PFDN6-201ENST00000374606 KRTAP5-5Q701N2 237 aaPredicted RBP5.49□□□□□ -1.53
PFDN6-201ENST00000374606 LUZP6Q538Z0 58 aa5.39□□□□□ -1.55
PFDN6-201ENST00000374606 KRTAP12-4P60329 112 aa5.34□□□□□ -1.55
PFDN6-201ENST00000374606 MT1AP04731 61 aa5.33□□□□□ -1.56
PFDN6-201ENST00000374606 KRTAP6-1Q3LI64 71 aa5.25□□□□□ -1.57
PFDN6-201ENST00000374606 SYNE1Q8NF91 8797 aaKnown RBP5.23□□□□□ -1.57
PFDN6-201ENST00000374606 AHNAKQ09666 5890 aaKnown RBP5.19□□□□□ -1.58
PFDN6-201ENST00000374606 KRTAP4-11Q9BYQ6 195 aa5.16□□□□□ -1.58
PFDN6-201ENST00000374606 MUC5ACP98088 5654 aa5.11□□□□□ -1.59
PFDN6-201ENST00000374606 MUC5BQ9HC84 5762 aaPredicted RBP5.1□□□□□ -1.59
PFDN6-201ENST00000374606 NDUFAF8A1L188 74 aa5□□□□□ -1.61
PFDN6-201ENST00000374606 KRTAP5-8O75690 187 aa5□□□□□ -1.61
PFDN6-201ENST00000374606 KRTAP5-2Q701N4 177 aa4.99□□□□□ -1.61
PFDN6-201ENST00000374606 KRTAP4-2Q9BYR5 136 aa4.97□□□□□ -1.61
PFDN6-201ENST00000374606 KRTAP6-2Q3LI66 62 aa4.9□□□□□ -1.63
PFDN6-201ENST00000374606 MT3P25713 68 aa4.84□□□□□ -1.63
PFDN6-201ENST00000374606 OBSCNQ5VST9 7968 aa4.7□□□□□ -1.66
PFDN6-201ENST00000374606 KRTAP5-1Q6L8H4 278 aa4.56□□□□□ -1.68
PFDN6-201ENST00000374606 LCE3DQ9BYE3 92 aa4.46□□□□□ -1.7
PFDN6-201ENST00000374606 LCE3EQ5T5B0 92 aa4.31□□□□□ -1.72
PFDN6-201ENST00000374606 LCE1EQ5T753 118 aa4.26□□□□□ -1.73
PFDN6-201ENST00000374606 INE1O15225 51 aa4.13□□□□□ -1.75
PFDN6-201ENST00000374606 LCE1FQ5T754 118 aa4.03□□□□□ -1.76
PFDN6-201ENST00000374606 LCE1BQ5T7P3 118 aa4.01□□□□□ -1.77
PFDN6-201ENST00000374606 LCE1CQ5T751 118 aa3.96□□□□□ -1.78
PFDN6-201ENST00000374606 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.68□□□□□ -1.82
PFDN6-201ENST00000374606 KRTAP5-11Q6L8G4 156 aa3.64□□□□□ -1.83
PFDN6-201ENST00000374606 PRM1P04553 51 aa3.62□□□□□ -1.83
PFDN6-201ENST00000374606 PHGR1C9JFL3 82 aa3.52□□□□□ -1.85
PFDN6-201ENST00000374606 KRTAP21-2Q3LI59 83 aa3.44□□□□□ -1.86
PFDN6-201ENST00000374606 KRTAP4-4Q9BYR3 166 aa3.07□□□□□ -1.92
PFDN6-201ENST00000374606 MUC19Q7Z5P9 8384 aa2.95□□□□□ -1.94
PFDN6-201ENST00000374606 KRTAP21-1Q3LI58 79 aa2.69□□□□□ -1.98
PFDN6-201ENST00000374606 MUC16Q8WXI7 14507 aa2.15□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 13.9 ms