RNA–Protein interactions for RNA: ENST00000373583.5

HDAC8-208, Transcript of histone deacetylase 8, humanhuman

TSL 5 BASIC

Gene HDAC8, Length 434 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-208ENST00000373583 V9GYY9 64 aa5.65□□□□□ -1.5
HDAC8-208ENST00000373583 Q1T7F1 81 aa5.61□□□□□ -1.51
HDAC8-208ENST00000373583 PSPHP1O15172 72 aa5.57□□□□□ -1.52
HDAC8-208ENST00000373583 K7ERS5 55 aa5.55□□□□□ -1.52
HDAC8-208ENST00000373583 KRTAP12-3P60328 96 aa5.54□□□□□ -1.52
HDAC8-208ENST00000373583 KRTAP25-1Q3LHN0 102 aa5.54□□□□□ -1.52
HDAC8-208ENST00000373583 KRTAP4-9Q9BYQ8 210 aa5.48□□□□□ -1.53
HDAC8-208ENST00000373583 KRTAP4-3Q9BYR4 195 aa5.48□□□□□ -1.53
HDAC8-208ENST00000373583 GPR98Q8WXG9 6306 aa5.46□□□□□ -1.54
HDAC8-208ENST00000373583 LCE4AQ5TA78 99 aa5.45□□□□□ -1.54
HDAC8-208ENST00000373583 LCE1DQ5T752 114 aa5.41□□□□□ -1.54
HDAC8-208ENST00000373583 A6NED7 52 aa5.4□□□□□ -1.54
HDAC8-208ENST00000373583 KRTAP5-4Q6L8H1 288 aa5.38□□□□□ -1.55
HDAC8-208ENST00000373583 KRTAP23-1A1A580 65 aa5.37□□□□□ -1.55
HDAC8-208ENST00000373583 KRTAP4-7Q9BYR0 210 aa5.37□□□□□ -1.55
HDAC8-208ENST00000373583 RPS28P62857 69 aaKnown RBP5.36□□□□□ -1.55
HDAC8-208ENST00000373583 MT4P47944 62 aa5.33□□□□□ -1.56
HDAC8-208ENST00000373583 HMCN1Q96RW7 5635 aa5.31□□□□□ -1.56
HDAC8-208ENST00000373583 KRTAP19-4Q3LI73 84 aa5.3□□□□□ -1.56
HDAC8-208ENST00000373583 CDC42SE1Q9NRR8 79 aa5.27□□□□□ -1.57
HDAC8-208ENST00000373583 KRTAP15-1Q3LI76 137 aa5.21□□□□□ -1.58
HDAC8-208ENST00000373583 KRTAP5-5Q701N2 237 aaPredicted RBP5.2□□□□□ -1.58
HDAC8-208ENST00000373583 KRTAP4-6Q9BYQ5 205 aa5.19□□□□□ -1.58
HDAC8-208ENST00000373583 ROMO1P60602 79 aa5.18□□□□□ -1.58
HDAC8-208ENST00000373583 LCE3CQ5T5A8 94 aa5.11□□□□□ -1.59
HDAC8-208ENST00000373583 LOC100996750A0A140TA64 210 aa5.09□□□□□ -1.59
HDAC8-208ENST00000373583 AHNAK2Q8IVF2 5795 aa5.07□□□□□ -1.6
HDAC8-208ENST00000373583 SPRR5A0A1B0GTR4 108 aa5.06□□□□□ -1.6
HDAC8-208ENST00000373583 KRTAP20-2Q3LI61 65 aa5.05□□□□□ -1.6
HDAC8-208ENST00000373583 KRTAP12-4P60329 112 aa5.02□□□□□ -1.61
HDAC8-208ENST00000373583 KRTAP5-10Q6L8G5 202 aa5.01□□□□□ -1.61
HDAC8-208ENST00000373583 KRTAP5-3Q6L8H2 238 aa4.91□□□□□ -1.62
HDAC8-208ENST00000373583 SYNE1Q8NF91 8797 aaKnown RBP4.9□□□□□ -1.63
HDAC8-208ENST00000373583 MT1AP04731 61 aa4.86□□□□□ -1.63
HDAC8-208ENST00000373583 KRTAP9-6A8MVA2 160 aa4.82□□□□□ -1.64
HDAC8-208ENST00000373583 KRTAP5-7Q6L8G8 165 aa4.81□□□□□ -1.64
HDAC8-208ENST00000373583 KRTAP6-1Q3LI64 71 aa4.8□□□□□ -1.64
HDAC8-208ENST00000373583 BRK1Q8WUW1 75 aa4.78□□□□□ -1.64
HDAC8-208ENST00000373583 KRTAP5-2Q701N4 177 aa4.74□□□□□ -1.65
HDAC8-208ENST00000373583 KRTAP9-4Q9BYQ2 154 aa4.67□□□□□ -1.66
HDAC8-208ENST00000373583 PRO0628Q9UI54 55 aa4.59□□□□□ -1.67
HDAC8-208ENST00000373583 KRTAP4-11Q9BYQ6 195 aa4.58□□□□□ -1.68
HDAC8-208ENST00000373583 KRTAP6-2Q3LI66 62 aa4.57□□□□□ -1.68
HDAC8-208ENST00000373583 PMAIP1Q13794 54 aa4.48□□□□□ -1.69
HDAC8-208ENST00000373583 KRTAP5-8O75690 187 aa4.44□□□□□ -1.7
HDAC8-208ENST00000373583 MT3P25713 68 aa4.43□□□□□ -1.7
HDAC8-208ENST00000373583 OBSCNQ5VST9 7968 aa4.36□□□□□ -1.71
HDAC8-208ENST00000373583 PRAC1Q96KF2 57 aa4.31□□□□□ -1.72
HDAC8-208ENST00000373583 KTN1-AS1Q86SY8 53 aa4.28□□□□□ -1.72
HDAC8-208ENST00000373583 KRTAP5-1Q6L8H4 278 aa4.21□□□□□ -1.74
HDAC8-208ENST00000373583 KRTAP9-9Q9BYP9 154 aa4.18□□□□□ -1.74
HDAC8-208ENST00000373583 MUC5BQ9HC84 5762 aaPredicted RBP4.16□□□□□ -1.74
HDAC8-208ENST00000373583 MUC5ACP98088 5654 aa4.15□□□□□ -1.74
HDAC8-208ENST00000373583 AHNAKQ09666 5890 aaKnown RBP4.11□□□□□ -1.75
HDAC8-208ENST00000373583 LCE1EQ5T753 118 aa4.08□□□□□ -1.76
HDAC8-208ENST00000373583 SVIPQ8NHG7 77 aa4.06□□□□□ -1.76
HDAC8-208ENST00000373583 H3BS24 57 aa3.91□□□□□ -1.78
HDAC8-208ENST00000373583 KRTAP4-2Q9BYR5 136 aa3.83□□□□□ -1.8
HDAC8-208ENST00000373583 LCE1CQ5T751 118 aa3.78□□□□□ -1.8
HDAC8-208ENST00000373583 LCE1BQ5T7P3 118 aa3.78□□□□□ -1.8
HDAC8-208ENST00000373583 KRTAP4-12Q9BQ66 201 aa3.77□□□□□ -1.81
HDAC8-208ENST00000373583 LCE3DQ9BYE3 92 aa3.69□□□□□ -1.82
HDAC8-208ENST00000373583 LUZP6Q538Z0 58 aa3.57□□□□□ -1.84
HDAC8-208ENST00000373583 LCE3EQ5T5B0 92 aa3.49□□□□□ -1.85
HDAC8-208ENST00000373583 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.47□□□□□ -1.85
HDAC8-208ENST00000373583 KRTAP5-11Q6L8G4 156 aa3.43□□□□□ -1.86
HDAC8-208ENST00000373583 NDUFAF8A1L188 74 aa3.32□□□□□ -1.88
HDAC8-208ENST00000373583 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
HDAC8-208ENST00000373583 KRTAP21-2Q3LI59 83 aa3.17□□□□□ -1.9
HDAC8-208ENST00000373583 PHGR1C9JFL3 82 aa2.95□□□□□ -1.94
HDAC8-208ENST00000373583 KRTAP4-4Q9BYR3 166 aa2.84□□□□□ -1.95
HDAC8-208ENST00000373583 A0A0A0MQY5 61 aa2.8□□□□□ -1.96
HDAC8-208ENST00000373583 MUC19Q7Z5P9 8384 aa2.67□□□□□ -1.98
HDAC8-208ENST00000373583 INE1O15225 51 aa2.67□□□□□ -1.98
HDAC8-208ENST00000373583 PRM1P04553 51 aa2.64□□□□□ -1.99
HDAC8-208ENST00000373583 KRTAP21-1Q3LI58 79 aa2.21□□□□□ -2.06
HDAC8-208ENST00000373583 MUC16Q8WXI7 14507 aa1.91□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 15.1 ms