RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 KRTAP4-12Q9BQ66 201 aa4.42□□□□□ -1.7
TRAPPC3-201ENST00000373159 TNP1P09430 55 aa4.39□□□□□ -1.71
TRAPPC3-201ENST00000373159 KRTAP20-2Q3LI61 65 aa4.39□□□□□ -1.71
TRAPPC3-201ENST00000373159 SERP2Q8N6R1 65 aa4.37□□□□□ -1.71
TRAPPC3-201ENST00000373159 SPRR5A0A1B0GTR4 108 aa4.36□□□□□ -1.71
TRAPPC3-201ENST00000373159 SMIM26A0A096LP01 95 aa4.35□□□□□ -1.71
TRAPPC3-201ENST00000373159 K7ERU9 68 aa4.33□□□□□ -1.72
TRAPPC3-201ENST00000373159 KRTAP5-5Q701N2 237 aaPredicted RBP4.32□□□□□ -1.72
TRAPPC3-201ENST00000373159 SYNE1Q8NF91 8797 aaKnown RBP4.3□□□□□ -1.72
TRAPPC3-201ENST00000373159 A8MU10 97 aa4.3□□□□□ -1.72
TRAPPC3-201ENST00000373159 KRTAP12-3P60328 96 aa4.29□□□□□ -1.72
TRAPPC3-201ENST00000373159 KRTAP12-4P60329 112 aa4.29□□□□□ -1.72
TRAPPC3-201ENST00000373159 KRTAP4-2Q9BYR5 136 aa4.26□□□□□ -1.73
TRAPPC3-201ENST00000373159 A0A1B0GU69 56 aa4.24□□□□□ -1.73
TRAPPC3-201ENST00000373159 H7BZZ5 65 aa4.16□□□□□ -1.74
TRAPPC3-201ENST00000373159 COX7CP15954 63 aa4.14□□□□□ -1.75
TRAPPC3-201ENST00000373159 KRTAP4-11Q9BYQ6 195 aa4.1□□□□□ -1.75
TRAPPC3-201ENST00000373159 AHNAKQ09666 5890 aaKnown RBP4.08□□□□□ -1.76
TRAPPC3-201ENST00000373159 KRTAP19-4Q3LI73 84 aa4.08□□□□□ -1.76
TRAPPC3-201ENST00000373159 PRR15LQ9BU68 103 aa4.03□□□□□ -1.76
TRAPPC3-201ENST00000373159 MUC5BQ9HC84 5762 aaPredicted RBP4.02□□□□□ -1.77
TRAPPC3-201ENST00000373159 KRTAP5-2Q701N4 177 aa4.02□□□□□ -1.77
TRAPPC3-201ENST00000373159 MUC5ACP98088 5654 aa4□□□□□ -1.77
TRAPPC3-201ENST00000373159 KRTAP25-1Q3LHN0 102 aa4□□□□□ -1.77
TRAPPC3-201ENST00000373159 H3BS24 57 aa3.99□□□□□ -1.77
TRAPPC3-201ENST00000373159 KRTAP5-8O75690 187 aa3.96□□□□□ -1.78
TRAPPC3-201ENST00000373159 OBSCNQ5VST9 7968 aa3.95□□□□□ -1.78
TRAPPC3-201ENST00000373159 LINC01558Q9Y6Z2 57 aa3.94□□□□□ -1.78
TRAPPC3-201ENST00000373159 MT1AP04731 61 aa3.93□□□□□ -1.78
TRAPPC3-201ENST00000373159 LCE3CQ5T5A8 94 aa3.93□□□□□ -1.78
TRAPPC3-201ENST00000373159 KRTAP6-1Q3LI64 71 aa3.92□□□□□ -1.78
TRAPPC3-201ENST00000373159 KRTAP15-1Q3LI76 137 aa3.92□□□□□ -1.78
TRAPPC3-201ENST00000373159 UQCR11O14957 56 aa3.9□□□□□ -1.79
TRAPPC3-201ENST00000373159 KRTAP23-1A1A580 65 aa3.86□□□□□ -1.79
TRAPPC3-201ENST00000373159 KRTAP6-2Q3LI66 62 aa3.81□□□□□ -1.8
TRAPPC3-201ENST00000373159 ATP5EP56381 51 aaPredicted RBP3.8□□□□□ -1.8
TRAPPC3-201ENST00000373159 ANAPC13Q9BS18 74 aa3.79□□□□□ -1.8
TRAPPC3-201ENST00000373159 MIR22HGQ0VDD5 57 aa3.77□□□□□ -1.81
TRAPPC3-201ENST00000373159 K7ERS5 55 aa3.76□□□□□ -1.81
TRAPPC3-201ENST00000373159 CCDC179H3BU77 68 aa3.75□□□□□ -1.81
TRAPPC3-201ENST00000373159 KRTAP9-6A8MVA2 160 aa3.71□□□□□ -1.82
TRAPPC3-201ENST00000373159 KRTAP5-1Q6L8H4 278 aa3.66□□□□□ -1.82
TRAPPC3-201ENST00000373159 MT3P25713 68 aa3.62□□□□□ -1.83
TRAPPC3-201ENST00000373159 TMEM258P61165 79 aa3.58□□□□□ -1.84
TRAPPC3-201ENST00000373159 RPS28P62857 69 aaKnown RBP3.55□□□□□ -1.84
TRAPPC3-201ENST00000373159 Q1T7F1 81 aa3.53□□□□□ -1.84
TRAPPC3-201ENST00000373159 PSPHP1O15172 72 aa3.51□□□□□ -1.85
TRAPPC3-201ENST00000373159 CDC42SE1Q9NRR8 79 aa3.51□□□□□ -1.85
TRAPPC3-201ENST00000373159 V9GYY9 64 aa3.48□□□□□ -1.85
TRAPPC3-201ENST00000373159 ROMO1P60602 79 aa3.45□□□□□ -1.86
TRAPPC3-201ENST00000373159 LCE1EQ5T753 118 aa3.42□□□□□ -1.86
TRAPPC3-201ENST00000373159 A6NED7 52 aa3.37□□□□□ -1.87
TRAPPC3-201ENST00000373159 LCE1BQ5T7P3 118 aa3.2□□□□□ -1.9
TRAPPC3-201ENST00000373159 LCE1CQ5T751 118 aa3.16□□□□□ -1.9
TRAPPC3-201ENST00000373159 SVIPQ8NHG7 77 aa3.12□□□□□ -1.91
TRAPPC3-201ENST00000373159 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.01□□□□□ -1.93
TRAPPC3-201ENST00000373159 LCE1FQ5T754 118 aa2.89□□□□□ -1.95
TRAPPC3-201ENST00000373159 KRTAP5-11Q6L8G4 156 aa2.89□□□□□ -1.95
TRAPPC3-201ENST00000373159 LCE3DQ9BYE3 92 aa2.77□□□□□ -1.97
TRAPPC3-201ENST00000373159 PCP4P48539 62 aa2.76□□□□□ -1.97
TRAPPC3-201ENST00000373159 PHGR1C9JFL3 82 aa2.71□□□□□ -1.98
TRAPPC3-201ENST00000373159 KRTAP21-2Q3LI59 83 aa2.6□□□□□ -1.99
TRAPPC3-201ENST00000373159 LCE3EQ5T5B0 92 aa2.56□□□□□ -2
TRAPPC3-201ENST00000373159 KRTAP4-4Q9BYR3 166 aa2.5□□□□□ -2.01
TRAPPC3-201ENST00000373159 BRK1Q8WUW1 75 aa2.49□□□□□ -2.01
TRAPPC3-201ENST00000373159 MUC19Q7Z5P9 8384 aa2.46□□□□□ -2.02
TRAPPC3-201ENST00000373159 A0A0A0MQY5 61 aa2.35□□□□□ -2.03
TRAPPC3-201ENST00000373159 PMAIP1Q13794 54 aa2.34□□□□□ -2.03
TRAPPC3-201ENST00000373159 PRAC1Q96KF2 57 aa2.33□□□□□ -2.04
TRAPPC3-201ENST00000373159 PRO0628Q9UI54 55 aa2.3□□□□□ -2.04
TRAPPC3-201ENST00000373159 KRTAP21-1Q3LI58 79 aa2.08□□□□□ -2.08
TRAPPC3-201ENST00000373159 KTN1-AS1Q86SY8 53 aa2.08□□□□□ -2.08
TRAPPC3-201ENST00000373159 NDUFAF8A1L188 74 aa2.07□□□□□ -2.08
TRAPPC3-201ENST00000373159 LUZP6Q538Z0 58 aa2.05□□□□□ -2.08
TRAPPC3-201ENST00000373159 PRM1P04553 51 aa1.73□□□□□ -2.13
TRAPPC3-201ENST00000373159 MUC16Q8WXI7 14507 aa1.69□□□□□ -2.14
TRAPPC3-201ENST00000373159 INE1O15225 51 aa1.44□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 83.8 ms