RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 A8MU10 97 aa5.63□□□□□ -1.51
SSR4-204ENST00000370087 UQCR11O14957 56 aa5.63□□□□□ -1.51
SSR4-204ENST00000370087 A6NED7 52 aa5.62□□□□□ -1.51
SSR4-204ENST00000370087 KRTAP12-1P59990 96 aa5.59□□□□□ -1.51
SSR4-204ENST00000370087 MIR22HGQ0VDD5 57 aa5.59□□□□□ -1.51
SSR4-204ENST00000370087 KRTAP4-6Q9BYQ5 205 aa5.59□□□□□ -1.51
SSR4-204ENST00000370087 MT1GP13640 62 aa5.57□□□□□ -1.52
SSR4-204ENST00000370087 KRTAP5-7Q6L8G8 165 aa5.57□□□□□ -1.52
SSR4-204ENST00000370087 KRTAP5-4Q6L8H1 288 aa5.56□□□□□ -1.52
SSR4-204ENST00000370087 MT1MQ8N339 61 aa5.54□□□□□ -1.52
SSR4-204ENST00000370087 KRTAP19-5Q3LI72 72 aa5.53□□□□□ -1.52
SSR4-204ENST00000370087 KRTAP4-3Q9BYR4 195 aa5.49□□□□□ -1.53
SSR4-204ENST00000370087 KRTAP5-3Q6L8H2 238 aa5.48□□□□□ -1.53
SSR4-204ENST00000370087 PP632Q6XCG6 107 aa5.48□□□□□ -1.53
SSR4-204ENST00000370087 K7ERS5 55 aa5.45□□□□□ -1.54
SSR4-204ENST00000370087 CDC42SE1Q9NRR8 79 aa5.45□□□□□ -1.54
SSR4-204ENST00000370087 MT1LQ93083 61 aa5.43□□□□□ -1.54
SSR4-204ENST00000370087 BRK1Q8WUW1 75 aa5.42□□□□□ -1.54
SSR4-204ENST00000370087 SPRR5A0A1B0GTR4 108 aa5.34□□□□□ -1.55
SSR4-204ENST00000370087 TNP1P09430 55 aa5.33□□□□□ -1.56
SSR4-204ENST00000370087 KRTAP20-2Q3LI61 65 aa5.29□□□□□ -1.56
SSR4-204ENST00000370087 C10orf95Q9H7T3 257 aa5.29□□□□□ -1.56
SSR4-204ENST00000370087 KRTAP4-7Q9BYR0 210 aa5.21□□□□□ -1.58
SSR4-204ENST00000370087 SVIPQ8NHG7 77 aa5.18□□□□□ -1.58
SSR4-204ENST00000370087 KRTAP25-1Q3LHN0 102 aa5.17□□□□□ -1.58
SSR4-204ENST00000370087 LCE3AQ5TA76 89 aa5.15□□□□□ -1.59
SSR4-204ENST00000370087 KRTAP5-5Q701N2 237 aaPredicted RBP5.14□□□□□ -1.59
SSR4-204ENST00000370087 PRO0628Q9UI54 55 aa5.12□□□□□ -1.59
SSR4-204ENST00000370087 ROMO1P60602 79 aa5.11□□□□□ -1.59
SSR4-204ENST00000370087 PMAIP1Q13794 54 aa5.08□□□□□ -1.6
SSR4-204ENST00000370087 KRTAP12-4P60329 112 aa5.03□□□□□ -1.6
SSR4-204ENST00000370087 KRTAP23-1A1A580 65 aa4.99□□□□□ -1.61
SSR4-204ENST00000370087 SYNE1Q8NF91 8797 aaKnown RBP4.98□□□□□ -1.61
SSR4-204ENST00000370087 LOC100996750A0A140TA64 210 aa4.96□□□□□ -1.62
SSR4-204ENST00000370087 KRTAP12-3P60328 96 aa4.96□□□□□ -1.62
SSR4-204ENST00000370087 KRTAP4-11Q9BYQ6 195 aa4.93□□□□□ -1.62
SSR4-204ENST00000370087 AHNAKQ09666 5890 aaKnown RBP4.89□□□□□ -1.63
SSR4-204ENST00000370087 MUC5ACP98088 5654 aa4.89□□□□□ -1.63
SSR4-204ENST00000370087 PRAC1Q96KF2 57 aa4.86□□□□□ -1.63
SSR4-204ENST00000370087 MUC5BQ9HC84 5762 aaPredicted RBP4.84□□□□□ -1.64
SSR4-204ENST00000370087 KRTAP5-8O75690 187 aa4.81□□□□□ -1.64
SSR4-204ENST00000370087 KRTAP5-2Q701N4 177 aa4.8□□□□□ -1.64
SSR4-204ENST00000370087 KTN1-AS1Q86SY8 53 aa4.8□□□□□ -1.64
SSR4-204ENST00000370087 KRTAP19-4Q3LI73 84 aa4.79□□□□□ -1.64
SSR4-204ENST00000370087 KRTAP15-1Q3LI76 137 aa4.74□□□□□ -1.65
SSR4-204ENST00000370087 KRTAP6-1Q3LI64 71 aa4.64□□□□□ -1.67
SSR4-204ENST00000370087 MT1AP04731 61 aa4.59□□□□□ -1.67
SSR4-204ENST00000370087 LCE3CQ5T5A8 94 aa4.59□□□□□ -1.67
SSR4-204ENST00000370087 KRTAP9-9Q9BYP9 154 aa4.58□□□□□ -1.68
SSR4-204ENST00000370087 OBSCNQ5VST9 7968 aa4.53□□□□□ -1.68
SSR4-204ENST00000370087 KRTAP6-2Q3LI66 62 aa4.52□□□□□ -1.69
SSR4-204ENST00000370087 KRTAP9-4Q9BYQ2 154 aa4.49□□□□□ -1.69
SSR4-204ENST00000370087 KRTAP5-1Q6L8H4 278 aa4.4□□□□□ -1.71
SSR4-204ENST00000370087 KRTAP9-6A8MVA2 160 aa4.32□□□□□ -1.72
SSR4-204ENST00000370087 MT3P25713 68 aa4.18□□□□□ -1.74
SSR4-204ENST00000370087 LCE1EQ5T753 118 aa3.95□□□□□ -1.78
SSR4-204ENST00000370087 LUZP6Q538Z0 58 aa3.91□□□□□ -1.78
SSR4-204ENST00000370087 KRTAP4-2Q9BYR5 136 aa3.87□□□□□ -1.79
SSR4-204ENST00000370087 LCE1BQ5T7P3 118 aa3.82□□□□□ -1.8
SSR4-204ENST00000370087 NDUFAF8A1L188 74 aa3.72□□□□□ -1.81
SSR4-204ENST00000370087 KRTAP4-12Q9BQ66 201 aa3.71□□□□□ -1.82
SSR4-204ENST00000370087 LCE1CQ5T751 118 aa3.68□□□□□ -1.82
SSR4-204ENST00000370087 H3BS24 57 aa3.54□□□□□ -1.84
SSR4-204ENST00000370087 KRTAP5-11Q6L8G4 156 aa3.49□□□□□ -1.85
SSR4-204ENST00000370087 LCE3DQ9BYE3 92 aa3.39□□□□□ -1.87
SSR4-204ENST00000370087 LCE1FQ5T754 118 aa3.38□□□□□ -1.87
SSR4-204ENST00000370087 PHGR1C9JFL3 82 aa3.35□□□□□ -1.87
SSR4-204ENST00000370087 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.3□□□□□ -1.88
SSR4-204ENST00000370087 LCE3EQ5T5B0 92 aa3.24□□□□□ -1.89
SSR4-204ENST00000370087 A0A0A0MQY5 61 aa3.16□□□□□ -1.9
SSR4-204ENST00000370087 KRTAP21-2Q3LI59 83 aa3.06□□□□□ -1.92
SSR4-204ENST00000370087 INE1O15225 51 aa2.98□□□□□ -1.93
SSR4-204ENST00000370087 KRTAP4-4Q9BYR3 166 aa2.92□□□□□ -1.94
SSR4-204ENST00000370087 MUC19Q7Z5P9 8384 aa2.82□□□□□ -1.96
SSR4-204ENST00000370087 PRM1P04553 51 aa2.69□□□□□ -1.98
SSR4-204ENST00000370087 KRTAP21-1Q3LI58 79 aa2.52□□□□□ -2.01
SSR4-204ENST00000370087 MUC16Q8WXI7 14507 aa2□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 139 ms