RNA–Protein interactions for RNA: ENST00000366740.5

MRPL55-213, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-213ENST00000366740 KRTAP19-5Q3LI72 72 aa4.23□□□□□ -1.73
MRPL55-213ENST00000366740 KRTAP5-4Q6L8H1 288 aa4.2□□□□□ -1.74
MRPL55-213ENST00000366740 PP632Q6XCG6 107 aa4.2□□□□□ -1.74
MRPL55-213ENST00000366740 MT1MQ8N339 61 aa4.18□□□□□ -1.74
MRPL55-213ENST00000366740 TNP1P09430 55 aa4.15□□□□□ -1.75
MRPL55-213ENST00000366740 LCE3AQ5TA76 89 aa4.15□□□□□ -1.75
MRPL55-213ENST00000366740 KRTAP5-7Q6L8G8 165 aa4.15□□□□□ -1.75
MRPL55-213ENST00000366740 UQCR11O14957 56 aa4.14□□□□□ -1.75
MRPL55-213ENST00000366740 KRTAP4-6Q9BYQ5 205 aa4.14□□□□□ -1.75
MRPL55-213ENST00000366740 MT1LQ93083 61 aa4.11□□□□□ -1.75
MRPL55-213ENST00000366740 KRTAP5-3Q6L8H2 238 aa4.08□□□□□ -1.76
MRPL55-213ENST00000366740 MIR22HGQ0VDD5 57 aa4.07□□□□□ -1.76
MRPL55-213ENST00000366740 KRTAP4-3Q9BYR4 195 aa4.06□□□□□ -1.76
MRPL55-213ENST00000366740 PSPHP1O15172 72 aa4.04□□□□□ -1.76
MRPL55-213ENST00000366740 Q1T7F1 81 aa4.04□□□□□ -1.76
MRPL55-213ENST00000366740 V9GYY9 64 aa4.01□□□□□ -1.77
MRPL55-213ENST00000366740 K7ERS5 55 aa3.98□□□□□ -1.77
MRPL55-213ENST00000366740 KRTAP12-3P60328 96 aa3.97□□□□□ -1.77
MRPL55-213ENST00000366740 KRTAP20-2Q3LI61 65 aa3.96□□□□□ -1.78
MRPL55-213ENST00000366740 KRTAP4-7Q9BYR0 210 aa3.95□□□□□ -1.78
MRPL55-213ENST00000366740 KRTAP25-1Q3LHN0 102 aa3.94□□□□□ -1.78
MRPL55-213ENST00000366740 SPRR5A0A1B0GTR4 108 aa3.93□□□□□ -1.78
MRPL55-213ENST00000366740 RPS28P62857 69 aaKnown RBP3.93□□□□□ -1.78
MRPL55-213ENST00000366740 SVIPQ8NHG7 77 aa3.92□□□□□ -1.78
MRPL55-213ENST00000366740 SYNE1Q8NF91 8797 aaKnown RBP3.88□□□□□ -1.79
MRPL55-213ENST00000366740 A6NED7 52 aa3.88□□□□□ -1.79
MRPL55-213ENST00000366740 KRTAP5-5Q701N2 237 aaPredicted RBP3.88□□□□□ -1.79
MRPL55-213ENST00000366740 KRTAP23-1A1A580 65 aa3.8□□□□□ -1.8
MRPL55-213ENST00000366740 KRTAP12-4P60329 112 aa3.8□□□□□ -1.8
MRPL55-213ENST00000366740 CDC42SE1Q9NRR8 79 aa3.76□□□□□ -1.81
MRPL55-213ENST00000366740 KRTAP15-1Q3LI76 137 aa3.74□□□□□ -1.81
MRPL55-213ENST00000366740 LOC100996750A0A140TA64 210 aa3.73□□□□□ -1.81
MRPL55-213ENST00000366740 ROMO1P60602 79 aa3.72□□□□□ -1.81
MRPL55-213ENST00000366740 KRTAP19-4Q3LI73 84 aa3.71□□□□□ -1.82
MRPL55-213ENST00000366740 KRTAP4-11Q9BYQ6 195 aa3.69□□□□□ -1.82
MRPL55-213ENST00000366740 LCE3CQ5T5A8 94 aa3.68□□□□□ -1.82
MRPL55-213ENST00000366740 AHNAKQ09666 5890 aaKnown RBP3.65□□□□□ -1.83
MRPL55-213ENST00000366740 MUC5ACP98088 5654 aa3.63□□□□□ -1.83
MRPL55-213ENST00000366740 KRTAP5-2Q701N4 177 aa3.62□□□□□ -1.83
MRPL55-213ENST00000366740 KRTAP5-8O75690 187 aa3.59□□□□□ -1.83
MRPL55-213ENST00000366740 MUC5BQ9HC84 5762 aaPredicted RBP3.58□□□□□ -1.84
MRPL55-213ENST00000366740 PRO0628Q9UI54 55 aa3.57□□□□□ -1.84
MRPL55-213ENST00000366740 KRTAP9-6A8MVA2 160 aa3.52□□□□□ -1.85
MRPL55-213ENST00000366740 OBSCNQ5VST9 7968 aa3.51□□□□□ -1.85
MRPL55-213ENST00000366740 MT1AP04731 61 aa3.5□□□□□ -1.85
MRPL55-213ENST00000366740 KRTAP6-1Q3LI64 71 aa3.49□□□□□ -1.85
MRPL55-213ENST00000366740 KRTAP9-9Q9BYP9 154 aa3.43□□□□□ -1.86
MRPL55-213ENST00000366740 KRTAP9-4Q9BYQ2 154 aa3.4□□□□□ -1.87
MRPL55-213ENST00000366740 BRK1Q8WUW1 75 aa3.39□□□□□ -1.87
MRPL55-213ENST00000366740 KRTAP6-2Q3LI66 62 aa3.38□□□□□ -1.87
MRPL55-213ENST00000366740 PMAIP1Q13794 54 aa3.33□□□□□ -1.88
MRPL55-213ENST00000366740 KRTAP5-1Q6L8H4 278 aa3.3□□□□□ -1.88
MRPL55-213ENST00000366740 KTN1-AS1Q86SY8 53 aa3.25□□□□□ -1.89
MRPL55-213ENST00000366740 MT3P25713 68 aa3.19□□□□□ -1.9
MRPL55-213ENST00000366740 PRAC1Q96KF2 57 aa3.11□□□□□ -1.91
MRPL55-213ENST00000366740 LCE1EQ5T753 118 aa3.03□□□□□ -1.92
MRPL55-213ENST00000366740 KRTAP4-2Q9BYR5 136 aa2.91□□□□□ -1.94
MRPL55-213ENST00000366740 LCE1BQ5T7P3 118 aa2.84□□□□□ -1.95
MRPL55-213ENST00000366740 LCE1CQ5T751 118 aa2.82□□□□□ -1.96
MRPL55-213ENST00000366740 KRTAP4-12Q9BQ66 201 aa2.72□□□□□ -1.97
MRPL55-213ENST00000366740 LCE3DQ9BYE3 92 aa2.65□□□□□ -1.99
MRPL55-213ENST00000366740 KRTAP5-11Q6L8G4 156 aa2.63□□□□□ -1.99
MRPL55-213ENST00000366740 H3BS24 57 aa2.6□□□□□ -1.99
MRPL55-213ENST00000366740 LCE1FQ5T754 118 aa2.6□□□□□ -1.99
MRPL55-213ENST00000366740 LUZP6Q538Z0 58 aa2.57□□□□□ -2
MRPL55-213ENST00000366740 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.55□□□□□ -2
MRPL55-213ENST00000366740 LCE3EQ5T5B0 92 aa2.51□□□□□ -2.01
MRPL55-213ENST00000366740 NDUFAF8A1L188 74 aa2.48□□□□□ -2.01
MRPL55-213ENST00000366740 PHGR1C9JFL3 82 aa2.47□□□□□ -2.01
MRPL55-213ENST00000366740 A0A0A0MQY5 61 aa2.42□□□□□ -2.02
MRPL55-213ENST00000366740 KRTAP21-2Q3LI59 83 aa2.32□□□□□ -2.04
MRPL55-213ENST00000366740 INE1O15225 51 aa2.26□□□□□ -2.05
MRPL55-213ENST00000366740 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
MRPL55-213ENST00000366740 KRTAP4-4Q9BYR3 166 aa2.15□□□□□ -2.07
MRPL55-213ENST00000366740 PRM1P04553 51 aa1.92□□□□□ -2.1
MRPL55-213ENST00000366740 KRTAP21-1Q3LI58 79 aa1.89□□□□□ -2.11
MRPL55-213ENST00000366740 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 12.7 ms