RNA–Protein interactions for RNA: ENST00000366286.6

YBX3-203, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-203ENST00000366286 C10orf95Q9H7T3 257 aa3.76□□□□□ -1.81
YBX3-203ENST00000366286 TMEM258P61165 79 aa3.75□□□□□ -1.81
YBX3-203ENST00000366286 LCE3AQ5TA76 89 aa3.73□□□□□ -1.81
YBX3-203ENST00000366286 TNP1P09430 55 aa3.72□□□□□ -1.81
YBX3-203ENST00000366286 MT1GP13640 62 aa3.72□□□□□ -1.81
YBX3-203ENST00000366286 MT1LQ93083 61 aa3.7□□□□□ -1.82
YBX3-203ENST00000366286 PP632Q6XCG6 107 aa3.69□□□□□ -1.82
YBX3-203ENST00000366286 DSTQ03001 7570 aaKnown RBP3.69□□□□□ -1.82
YBX3-203ENST00000366286 MT1MQ8N339 61 aa3.68□□□□□ -1.82
YBX3-203ENST00000366286 UQCR11O14957 56 aa3.67□□□□□ -1.82
YBX3-203ENST00000366286 PCP4P48539 62 aa3.64□□□□□ -1.83
YBX3-203ENST00000366286 MIR22HGQ0VDD5 57 aa3.6□□□□□ -1.83
YBX3-203ENST00000366286 KRTAP4-3Q9BYR4 195 aa3.6□□□□□ -1.83
YBX3-203ENST00000366286 KRTAP12-3P60328 96 aa3.57□□□□□ -1.84
YBX3-203ENST00000366286 LCE4AQ5TA78 99 aa3.56□□□□□ -1.84
YBX3-203ENST00000366286 PSPHP1O15172 72 aa3.54□□□□□ -1.84
YBX3-203ENST00000366286 GPR98Q8WXG9 6306 aa3.53□□□□□ -1.84
YBX3-203ENST00000366286 V9GYY9 64 aa3.53□□□□□ -1.84
YBX3-203ENST00000366286 MT4P47944 62 aa3.52□□□□□ -1.85
YBX3-203ENST00000366286 Q1T7F1 81 aa3.52□□□□□ -1.85
YBX3-203ENST00000366286 KRTAP25-1Q3LHN0 102 aa3.52□□□□□ -1.85
YBX3-203ENST00000366286 K7ERS5 55 aa3.51□□□□□ -1.85
YBX3-203ENST00000366286 KRTAP5-4Q6L8H1 288 aa3.49□□□□□ -1.85
YBX3-203ENST00000366286 HMCN1Q96RW7 5635 aa3.45□□□□□ -1.86
YBX3-203ENST00000366286 A6NED7 52 aa3.42□□□□□ -1.86
YBX3-203ENST00000366286 RPS28P62857 69 aaKnown RBP3.41□□□□□ -1.86
YBX3-203ENST00000366286 KRTAP23-1A1A580 65 aa3.38□□□□□ -1.87
YBX3-203ENST00000366286 KRTAP5-5Q701N2 237 aaPredicted RBP3.38□□□□□ -1.87
YBX3-203ENST00000366286 KRTAP15-1Q3LI76 137 aa3.34□□□□□ -1.87
YBX3-203ENST00000366286 CDC42SE1Q9NRR8 79 aa3.34□□□□□ -1.87
YBX3-203ENST00000366286 AHNAK2Q8IVF2 5795 aa3.34□□□□□ -1.88
YBX3-203ENST00000366286 KRTAP19-4Q3LI73 84 aa3.33□□□□□ -1.88
YBX3-203ENST00000366286 KRTAP20-2Q3LI61 65 aa3.31□□□□□ -1.88
YBX3-203ENST00000366286 KRTAP5-10Q6L8G5 202 aa3.3□□□□□ -1.88
YBX3-203ENST00000366286 LCE3CQ5T5A8 94 aa3.29□□□□□ -1.88
YBX3-203ENST00000366286 ROMO1P60602 79 aa3.28□□□□□ -1.88
YBX3-203ENST00000366286 SPRR5A0A1B0GTR4 108 aa3.27□□□□□ -1.89
YBX3-203ENST00000366286 KRTAP12-4P60329 112 aa3.26□□□□□ -1.89
YBX3-203ENST00000366286 KRTAP5-7Q6L8G8 165 aa3.17□□□□□ -1.9
YBX3-203ENST00000366286 SYNE1Q8NF91 8797 aaKnown RBP3.14□□□□□ -1.91
YBX3-203ENST00000366286 MT1AP04731 61 aa3.14□□□□□ -1.91
YBX3-203ENST00000366286 KRTAP6-1Q3LI64 71 aa3.13□□□□□ -1.91
YBX3-203ENST00000366286 KRTAP9-6A8MVA2 160 aa3.12□□□□□ -1.91
YBX3-203ENST00000366286 KRTAP5-2Q701N4 177 aa3.07□□□□□ -1.92
YBX3-203ENST00000366286 BRK1Q8WUW1 75 aa3.07□□□□□ -1.92
YBX3-203ENST00000366286 KRTAP5-6Q6L8G9 129 aaPredicted RBP3□□□□□ -1.93
YBX3-203ENST00000366286 KRTAP6-2Q3LI66 62 aa2.98□□□□□ -1.93
YBX3-203ENST00000366286 KRTAP5-8O75690 187 aa2.91□□□□□ -1.94
YBX3-203ENST00000366286 PMAIP1Q13794 54 aa2.89□□□□□ -1.95
YBX3-203ENST00000366286 MT3P25713 68 aa2.85□□□□□ -1.95
YBX3-203ENST00000366286 PRO0628Q9UI54 55 aa2.84□□□□□ -1.95
YBX3-203ENST00000366286 PRAC1Q96KF2 57 aa2.78□□□□□ -1.96
YBX3-203ENST00000366286 OBSCNQ5VST9 7968 aa2.76□□□□□ -1.97
YBX3-203ENST00000366286 KRTAP5-1Q6L8H4 278 aa2.75□□□□□ -1.97
YBX3-203ENST00000366286 MUC5ACP98088 5654 aa2.71□□□□□ -1.97
YBX3-203ENST00000366286 MUC5BQ9HC84 5762 aaPredicted RBP2.69□□□□□ -1.98
YBX3-203ENST00000366286 KRTAP5-11Q6L8G4 156 aa2.68□□□□□ -1.98
YBX3-203ENST00000366286 AHNAKQ09666 5890 aaKnown RBP2.68□□□□□ -1.98
YBX3-203ENST00000366286 KTN1-AS1Q86SY8 53 aa2.66□□□□□ -1.98
YBX3-203ENST00000366286 LCE1EQ5T753 118 aa2.61□□□□□ -1.99
YBX3-203ENST00000366286 SVIPQ8NHG7 77 aa2.56□□□□□ -2
YBX3-203ENST00000366286 KRTAP4-4Q9BYR3 166 aa2.52□□□□□ -2.01
YBX3-203ENST00000366286 LCE1BQ5T7P3 118 aa2.48□□□□□ -2.01
YBX3-203ENST00000366286 LCE1CQ5T751 118 aa2.43□□□□□ -2.02
YBX3-203ENST00000366286 LCE3DQ9BYE3 92 aa2.37□□□□□ -2.03
YBX3-203ENST00000366286 LUZP6Q538Z0 58 aa2.23□□□□□ -2.05
YBX3-203ENST00000366286 LCE3EQ5T5B0 92 aa2.23□□□□□ -2.05
YBX3-203ENST00000366286 LCE1FQ5T754 118 aa2.13□□□□□ -2.07
YBX3-203ENST00000366286 NDUFAF8A1L188 74 aa2.05□□□□□ -2.08
YBX3-203ENST00000366286 KRTAP21-2Q3LI59 83 aa2.05□□□□□ -2.08
YBX3-203ENST00000366286 H3BS24 57 aa1.94□□□□□ -2.1
YBX3-203ENST00000366286 PHGR1C9JFL3 82 aa1.91□□□□□ -2.1
YBX3-203ENST00000366286 MUC19Q7Z5P9 8384 aa1.69□□□□□ -2.14
YBX3-203ENST00000366286 PRM1P04553 51 aa1.69□□□□□ -2.14
YBX3-203ENST00000366286 A0A0A0MQY5 61 aa1.68□□□□□ -2.14
YBX3-203ENST00000366286 INE1O15225 51 aa1.62□□□□□ -2.15
YBX3-203ENST00000366286 KRTAP21-1Q3LI58 79 aa1.45□□□□□ -2.18
YBX3-203ENST00000366286 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 102.5 ms