RNA–Protein interactions for RNA: ENST00000361354.8

NCKAP1-202, Transcript of NCK associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCKAP1, Length 20,347 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-202ENST00000361354 KRTAP6-2Q3LI66 62 aa2.31□□□□□ -2.04
NCKAP1-202ENST00000361354 HERC2O95714 4834 aa2.3□□□□□ -2.04
NCKAP1-202ENST00000361354 BIRC6Q9NR09 4857 aa2.29□□□□□ -2.04
NCKAP1-202ENST00000361354 LRP2P98164 4655 aa2.29□□□□□ -2.04
NCKAP1-202ENST00000361354 KRTAP4-9Q9BYQ8 210 aa2.28□□□□□ -2.05
NCKAP1-202ENST00000361354 KRTAP4-3Q9BYR4 195 aa2.26□□□□□ -2.05
NCKAP1-202ENST00000361354 KMT2CQ8NEZ4 4911 aaKnown RBP2.25□□□□□ -2.05
NCKAP1-202ENST00000361354 HERC1Q15751 4861 aa2.25□□□□□ -2.05
NCKAP1-202ENST00000361354 KRTAP19-6Q3LI70 58 aa2.22□□□□□ -2.05
NCKAP1-202ENST00000361354 LCE4AQ5TA78 99 aa2.18□□□□□ -2.06
NCKAP1-202ENST00000361354 HYDINQ4G0P3 5121 aa2.17□□□□□ -2.06
NCKAP1-202ENST00000361354 KRTAP2-2Q9BYT5 123 aa2.15□□□□□ -2.07
NCKAP1-202ENST00000361354 KRTAP20-1Q3LI63 56 aa2.15□□□□□ -2.07
NCKAP1-202ENST00000361354 LPAP08519 4548 aa2.15□□□□□ -2.07
NCKAP1-202ENST00000361354 KRTAP9-7A8MTY7 169 aa2.14□□□□□ -2.07
NCKAP1-202ENST00000361354 KRTAP9-2Q9BYQ4 174 aa2.14□□□□□ -2.07
NCKAP1-202ENST00000361354 KRTAP19-7Q3SYF9 63 aa2.13□□□□□ -2.07
NCKAP1-202ENST00000361354 KRTAP6-1Q3LI64 71 aa2.13□□□□□ -2.07
NCKAP1-202ENST00000361354 KRTAP9-4Q9BYQ2 154 aa2.12□□□□□ -2.07
NCKAP1-202ENST00000361354 EPPK1P58107 5090 aaKnown RBP2.12□□□□□ -2.07
NCKAP1-202ENST00000361354 KRTAP17-1Q9BYP8 105 aa2.09□□□□□ -2.07
NCKAP1-202ENST00000361354 RYR2Q92736 4967 aa2.06□□□□□ -2.08
NCKAP1-202ENST00000361354 KRTAP19-2Q3LHN2 52 aa2.03□□□□□ -2.08
NCKAP1-202ENST00000361354 SYNE1Q8NF91 8797 aaKnown RBP2.03□□□□□ -2.08
NCKAP1-202ENST00000361354 SYNE2Q8WXH0 6885 aaKnown RBP2.01□□□□□ -2.09
NCKAP1-202ENST00000361354 KRTAP9-9Q9BYP9 154 aa2□□□□□ -2.09
NCKAP1-202ENST00000361354 KRTAP9-6A8MVA2 160 aa1.97□□□□□ -2.09
NCKAP1-202ENST00000361354 KRTAP9-6A0A140TA67 174 aa1.95□□□□□ -2.1
NCKAP1-202ENST00000361354 LCE2AQ5TA79 106 aaPredicted RBP1.94□□□□□ -2.1
NCKAP1-202ENST00000361354 KRTAP4-11Q9BYQ6 195 aa1.92□□□□□ -2.1
NCKAP1-202ENST00000361354 HMCN2Q8NDA2 5059 aa1.92□□□□□ -2.1
NCKAP1-202ENST00000361354 KRTAP6-3Q3LI67 103 aa1.91□□□□□ -2.1
NCKAP1-202ENST00000361354 MUC2Q02817 5179 aa1.91□□□□□ -2.1
NCKAP1-202ENST00000361354 KIAA1109Q2LD37 5005 aa1.85□□□□□ -2.11
NCKAP1-202ENST00000361354 RNF213Q63HN8 5207 aa1.83□□□□□ -2.12
NCKAP1-202ENST00000361354 KRTAP20-2Q3LI61 65 aa1.83□□□□□ -2.12
NCKAP1-202ENST00000361354 FAT4Q6V0I7 4981 aa1.81□□□□□ -2.12
NCKAP1-202ENST00000361354 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.77□□□□□ -2.13
NCKAP1-202ENST00000361354 UBR4Q5T4S7 5183 aa1.76□□□□□ -2.13
NCKAP1-202ENST00000361354 KRTAP4-4Q9BYR3 166 aa1.74□□□□□ -2.13
NCKAP1-202ENST00000361354 FSIP2Q5CZC0 6907 aa1.72□□□□□ -2.13
NCKAP1-202ENST00000361354 ABCA13Q86UQ4 5058 aa1.72□□□□□ -2.13
NCKAP1-202ENST00000361354 MDN1Q9NU22 5596 aa1.64□□□□□ -2.15
NCKAP1-202ENST00000361354 KMT2DO14686 5537 aa1.64□□□□□ -2.15
NCKAP1-202ENST00000361354 OBSCNQ5VST9 7968 aa1.63□□□□□ -2.15
NCKAP1-202ENST00000361354 FCGBPQ9Y6R7 5405 aaPredicted RBP1.63□□□□□ -2.15
NCKAP1-202ENST00000361354 KRTAP4-6Q9BYQ5 205 aa1.63□□□□□ -2.15
NCKAP1-202ENST00000361354 KRTAP4-12Q9BQ66 201 aa1.62□□□□□ -2.15
NCKAP1-202ENST00000361354 KRTAP4-2Q9BYR5 136 aa1.62□□□□□ -2.15
NCKAP1-202ENST00000361354 USH2AO75445 5202 aa1.6□□□□□ -2.15
NCKAP1-202ENST00000361354 MUC12Q9UKN1 5478 aa1.57□□□□□ -2.16
NCKAP1-202ENST00000361354 KRTAP5-5Q701N2 237 aaPredicted RBP1.52□□□□□ -2.17
NCKAP1-202ENST00000361354 KRTAP5-9P26371 169 aa1.49□□□□□ -2.17
NCKAP1-202ENST00000361354 KRTAP5-4Q6L8H1 288 aa1.49□□□□□ -2.17
NCKAP1-202ENST00000361354 NEBP20929 6669 aa1.47□□□□□ -2.17
NCKAP1-202ENST00000361354 MACF1Q9UPN3 7388 aaKnown RBP1.47□□□□□ -2.17
NCKAP1-202ENST00000361354 DSTQ03001 7570 aaKnown RBP1.43□□□□□ -2.18
NCKAP1-202ENST00000361354 GPR98Q8WXG9 6306 aa1.42□□□□□ -2.18
NCKAP1-202ENST00000361354 MUC19Q7Z5P9 8384 aa1.4□□□□□ -2.18
NCKAP1-202ENST00000361354 SSPOA2VEC9 5147 aa1.39□□□□□ -2.19
NCKAP1-202ENST00000361354 MUC5ACP98088 5654 aa1.36□□□□□ -2.19
NCKAP1-202ENST00000361354 HMCN1Q96RW7 5635 aa1.34□□□□□ -2.19
NCKAP1-202ENST00000361354 KRTAP5-3Q6L8H2 238 aa1.29□□□□□ -2.2
NCKAP1-202ENST00000361354 MUC5BQ9HC84 5762 aaPredicted RBP1.27□□□□□ -2.21
NCKAP1-202ENST00000361354 PHGR1C9JFL3 82 aa1.23□□□□□ -2.21
NCKAP1-202ENST00000361354 KRTAP5-10Q6L8G5 202 aa1.22□□□□□ -2.21
NCKAP1-202ENST00000361354 AHNAK2Q8IVF2 5795 aa1.17□□□□□ -2.22
NCKAP1-202ENST00000361354 KRTAP5-2Q701N4 177 aa1.17□□□□□ -2.22
NCKAP1-202ENST00000361354 KRTAP21-1Q3LI58 79 aa1.1□□□□□ -2.23
NCKAP1-202ENST00000361354 KRTAP5-8O75690 187 aa1.08□□□□□ -2.24
NCKAP1-202ENST00000361354 KRTAP5-1Q6L8H4 278 aa1.06□□□□□ -2.24
NCKAP1-202ENST00000361354 KRTAP5-11Q6L8G4 156 aa1.05□□□□□ -2.24
NCKAP1-202ENST00000361354 AHNAKQ09666 5890 aaKnown RBP1.05□□□□□ -2.24
NCKAP1-202ENST00000361354 KRTAP21-2Q3LI59 83 aa0.92□□□□□ -2.26
NCKAP1-202ENST00000361354 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.83□□□□□ -2.28
NCKAP1-202ENST00000361354 MUC16Q8WXI7 14507 aa0.79□□□□□ -2.28
NCKAP1-202ENST00000361354 KRTAP5-7Q6L8G8 165 aa0.75□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 11.9 ms