RNA–Protein interactions for RNA: ENST00000359875.9

HHLA3-201, Transcript of HERV-H LTR-associating 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HHLA3, Length 898 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3-201ENST00000359875 KRTAP2-1Q9BYU5 128 aa2.76□□□□□ -1.97
HHLA3-201ENST00000359875 CHKB-CPT1BH3BT56 60 aa2.75□□□□□ -1.97
HHLA3-201ENST00000359875 SNURFQ9Y675 71 aa2.75□□□□□ -1.97
HHLA3-201ENST00000359875 LCE3AQ5TA76 89 aa2.74□□□□□ -1.97
HHLA3-201ENST00000359875 SPANXA2-OT1Q8N9U9 137 aa2.74□□□□□ -1.97
HHLA3-201ENST00000359875 SERP2Q8N6R1 65 aa2.73□□□□□ -1.97
HHLA3-201ENST00000359875 LINC01554Q52M75 96 aa2.72□□□□□ -1.97
HHLA3-201ENST00000359875 SPRR2DP22532 72 aa2.71□□□□□ -1.98
HHLA3-201ENST00000359875 LCE3EQ5T5B0 92 aa2.71□□□□□ -1.98
HHLA3-201ENST00000359875 K7ERS5 55 aa2.68□□□□□ -1.98
HHLA3-201ENST00000359875 COX7CP15954 63 aa2.66□□□□□ -1.98
HHLA3-201ENST00000359875 COA5Q86WW8 74 aa2.65□□□□□ -1.99
HHLA3-201ENST00000359875 A6NED7 52 aa2.63□□□□□ -1.99
HHLA3-201ENST00000359875 H7BZZ5 65 aa2.61□□□□□ -1.99
HHLA3-201ENST00000359875 KRTAP13-4Q3LI77 160 aa2.61□□□□□ -1.99
HHLA3-201ENST00000359875 SERP1Q9Y6X1 66 aa2.61□□□□□ -1.99
HHLA3-201ENST00000359875 CYSTM1Q9H1C7 97 aa2.58□□□□□ -2
HHLA3-201ENST00000359875 DSTQ03001 7570 aaKnown RBP2.57□□□□□ -2
HHLA3-201ENST00000359875 A0A1B0GU33 70 aa2.55□□□□□ -2
HHLA3-201ENST00000359875 A0A0D9SG42 100 aa2.54□□□□□ -2
HHLA3-201ENST00000359875 GPR98Q8WXG9 6306 aa2.53□□□□□ -2
HHLA3-201ENST00000359875 SPATA8Q6RVD6 105 aa2.53□□□□□ -2
HHLA3-201ENST00000359875 A0A1B0GU69 56 aa2.52□□□□□ -2.01
HHLA3-201ENST00000359875 SPINT4Q6UDR6 99 aa2.51□□□□□ -2.01
HHLA3-201ENST00000359875 CCDC179H3BU77 68 aa2.5□□□□□ -2.01
HHLA3-201ENST00000359875 ATP5EP56381 51 aaPredicted RBP2.5□□□□□ -2.01
HHLA3-201ENST00000359875 KRTAP12-1P59990 96 aa2.5□□□□□ -2.01
HHLA3-201ENST00000359875 KRTAP19-7Q3SYF9 63 aa2.5□□□□□ -2.01
HHLA3-201ENST00000359875 KRTAP19-3Q7Z4W3 81 aa2.5□□□□□ -2.01
HHLA3-201ENST00000359875 MT1EP04732 61 aa2.49□□□□□ -2.01
HHLA3-201ENST00000359875 KRTAP5-5Q701N2 237 aaPredicted RBP2.49□□□□□ -2.01
HHLA3-201ENST00000359875 KTN1-AS1Q86SY8 53 aa2.47□□□□□ -2.01
HHLA3-201ENST00000359875 PRR15LQ9BU68 103 aa2.46□□□□□ -2.02
HHLA3-201ENST00000359875 MT1GP13640 62 aa2.45□□□□□ -2.02
HHLA3-201ENST00000359875 KRTAP25-1Q3LHN0 102 aa2.45□□□□□ -2.02
HHLA3-201ENST00000359875 PP632Q6XCG6 107 aa2.45□□□□□ -2.02
HHLA3-201ENST00000359875 TMEM258P61165 79 aa2.43□□□□□ -2.02
HHLA3-201ENST00000359875 RPS28P62857 69 aaKnown RBP2.43□□□□□ -2.02
HHLA3-201ENST00000359875 LCE1CQ5T751 118 aa2.43□□□□□ -2.02
HHLA3-201ENST00000359875 LCE1BQ5T7P3 118 aa2.43□□□□□ -2.02
HHLA3-201ENST00000359875 LINC01558Q9Y6Z2 57 aa2.43□□□□□ -2.02
HHLA3-201ENST00000359875 TNP1P09430 55 aa2.39□□□□□ -2.03
HHLA3-201ENST00000359875 KRTAP19-5Q3LI72 72 aa2.39□□□□□ -2.03
HHLA3-201ENST00000359875 KRTAP5-8O75690 187 aa2.38□□□□□ -2.03
HHLA3-201ENST00000359875 MT1MQ8N339 61 aa2.38□□□□□ -2.03
HHLA3-201ENST00000359875 UQCR11O14957 56 aa2.37□□□□□ -2.03
HHLA3-201ENST00000359875 C10orf95Q9H7T3 257 aa2.37□□□□□ -2.03
HHLA3-201ENST00000359875 MT4P47944 62 aa2.36□□□□□ -2.03
HHLA3-201ENST00000359875 MT1LQ93083 61 aa2.36□□□□□ -2.03
HHLA3-201ENST00000359875 HMCN1Q96RW7 5635 aa2.36□□□□□ -2.03
HHLA3-201ENST00000359875 MIR22HGQ0VDD5 57 aa2.31□□□□□ -2.04
HHLA3-201ENST00000359875 KRTAP5-10Q6L8G5 202 aa2.3□□□□□ -2.04
HHLA3-201ENST00000359875 BRK1Q8WUW1 75 aa2.28□□□□□ -2.04
HHLA3-201ENST00000359875 AHNAK2Q8IVF2 5795 aa2.28□□□□□ -2.05
HHLA3-201ENST00000359875 Q1T7F1 81 aa2.27□□□□□ -2.05
HHLA3-201ENST00000359875 KRTAP12-3P60328 96 aa2.26□□□□□ -2.05
HHLA3-201ENST00000359875 KRTAP5-7Q6L8G8 165 aa2.24□□□□□ -2.05
HHLA3-201ENST00000359875 SPRR5A0A1B0GTR4 108 aa2.22□□□□□ -2.05
HHLA3-201ENST00000359875 KRTAP20-2Q3LI61 65 aa2.21□□□□□ -2.06
HHLA3-201ENST00000359875 KRTAP12-4P60329 112 aa2.19□□□□□ -2.06
HHLA3-201ENST00000359875 ROMO1P60602 79 aa2.19□□□□□ -2.06
HHLA3-201ENST00000359875 SYNE1Q8NF91 8797 aaKnown RBP2.18□□□□□ -2.06
HHLA3-201ENST00000359875 CDC42SE1Q9NRR8 79 aa2.16□□□□□ -2.06
HHLA3-201ENST00000359875 LCE3DQ9BYE3 92 aa2.14□□□□□ -2.07
HHLA3-201ENST00000359875 MT1AP04731 61 aa2.02□□□□□ -2.09
HHLA3-201ENST00000359875 KRTAP6-1Q3LI64 71 aa1.98□□□□□ -2.09
HHLA3-201ENST00000359875 MUC5ACP98088 5654 aa1.95□□□□□ -2.1
HHLA3-201ENST00000359875 AHNAKQ09666 5890 aaKnown RBP1.94□□□□□ -2.1
HHLA3-201ENST00000359875 MUC19Q7Z5P9 8384 aa1.93□□□□□ -2.1
HHLA3-201ENST00000359875 KRTAP6-2Q3LI66 62 aa1.92□□□□□ -2.1
HHLA3-201ENST00000359875 MUC5BQ9HC84 5762 aaPredicted RBP1.91□□□□□ -2.1
HHLA3-201ENST00000359875 INE1O15225 51 aa1.87□□□□□ -2.11
HHLA3-201ENST00000359875 KRTAP21-2Q3LI59 83 aa1.7□□□□□ -2.14
HHLA3-201ENST00000359875 PHGR1C9JFL3 82 aa1.34□□□□□ -2.19
HHLA3-201ENST00000359875 PRM1P04553 51 aa1.08□□□□□ -2.24
HHLA3-201ENST00000359875 KRTAP21-1Q3LI58 79 aa1.05□□□□□ -2.24
HHLA3-201ENST00000359875 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 7.9 ms