RNA–Protein interactions for RNA: ENST00000357194.10

UBE2D3-206, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 660 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-206ENST00000357194 KRTAP5-11Q6L8G4 156 aa3.6□□□□□ -1.83
UBE2D3-206ENST00000357194 MT1LQ93083 61 aa3.6□□□□□ -1.83
UBE2D3-206ENST00000357194 SPANXA2-OT1Q8N9U9 137 aa3.59□□□□□ -1.83
UBE2D3-206ENST00000357194 KRTAP4-3Q9BYR4 195 aa3.59□□□□□ -1.83
UBE2D3-206ENST00000357194 KRTAP5-7Q6L8G8 165 aa3.57□□□□□ -1.84
UBE2D3-206ENST00000357194 SPINT4Q6UDR6 99 aa3.54□□□□□ -1.84
UBE2D3-206ENST00000357194 COX7CP15954 63 aa3.53□□□□□ -1.84
UBE2D3-206ENST00000357194 COA5Q86WW8 74 aa3.52□□□□□ -1.85
UBE2D3-206ENST00000357194 SPATA8Q6RVD6 105 aa3.51□□□□□ -1.85
UBE2D3-206ENST00000357194 H7BZZ5 65 aa3.49□□□□□ -1.85
UBE2D3-206ENST00000357194 C10orf95Q9H7T3 257 aa3.49□□□□□ -1.85
UBE2D3-206ENST00000357194 KRTAP12-1P59990 96 aa3.48□□□□□ -1.85
UBE2D3-206ENST00000357194 SEC61GP60059 68 aa3.46□□□□□ -1.86
UBE2D3-206ENST00000357194 LCE3AQ5TA76 89 aa3.46□□□□□ -1.86
UBE2D3-206ENST00000357194 SERP1Q9Y6X1 66 aa3.46□□□□□ -1.86
UBE2D3-206ENST00000357194 KRTAP20-2Q3LI61 65 aa3.45□□□□□ -1.86
UBE2D3-206ENST00000357194 SPRR5A0A1B0GTR4 108 aa3.43□□□□□ -1.86
UBE2D3-206ENST00000357194 A0A1B0GU33 70 aa3.43□□□□□ -1.86
UBE2D3-206ENST00000357194 ANAPC13Q9BS18 74 aa3.42□□□□□ -1.86
UBE2D3-206ENST00000357194 CCDC179H3BU77 68 aa3.4□□□□□ -1.87
UBE2D3-206ENST00000357194 SYNE1Q8NF91 8797 aaKnown RBP3.4□□□□□ -1.87
UBE2D3-206ENST00000357194 TNP1P09430 55 aa3.39□□□□□ -1.87
UBE2D3-206ENST00000357194 KRTAP5-5Q701N2 237 aaPredicted RBP3.37□□□□□ -1.87
UBE2D3-206ENST00000357194 KRTAP12-4P60329 112 aa3.36□□□□□ -1.87
UBE2D3-206ENST00000357194 SMIM26A0A096LP01 95 aa3.33□□□□□ -1.88
UBE2D3-206ENST00000357194 KRTAP12-3P60328 96 aa3.33□□□□□ -1.88
UBE2D3-206ENST00000357194 A0A1B0GU69 56 aa3.32□□□□□ -1.88
UBE2D3-206ENST00000357194 A8MU10 97 aa3.32□□□□□ -1.88
UBE2D3-206ENST00000357194 KRTAP5-1Q6L8H4 278 aa3.31□□□□□ -1.88
UBE2D3-206ENST00000357194 ATP5EP56381 51 aaPredicted RBP3.26□□□□□ -1.89
UBE2D3-206ENST00000357194 LCE1EQ5T753 118 aa3.23□□□□□ -1.89
UBE2D3-206ENST00000357194 KRTAP4-4Q9BYR3 166 aa3.22□□□□□ -1.89
UBE2D3-206ENST00000357194 LINC01558Q9Y6Z2 57 aa3.22□□□□□ -1.89
UBE2D3-206ENST00000357194 TMEM258P61165 79 aa3.21□□□□□ -1.9
UBE2D3-206ENST00000357194 PRR15LQ9BU68 103 aa3.2□□□□□ -1.9
UBE2D3-206ENST00000357194 KRTAP5-2Q701N4 177 aa3.13□□□□□ -1.91
UBE2D3-206ENST00000357194 KRTAP5-8O75690 187 aa3.12□□□□□ -1.91
UBE2D3-206ENST00000357194 OBSCNQ5VST9 7968 aa3.11□□□□□ -1.91
UBE2D3-206ENST00000357194 UQCR11O14957 56 aa3.11□□□□□ -1.91
UBE2D3-206ENST00000357194 MT3P25713 68 aa3.11□□□□□ -1.91
UBE2D3-206ENST00000357194 MUC5ACP98088 5654 aa3.1□□□□□ -1.91
UBE2D3-206ENST00000357194 AHNAKQ09666 5890 aaKnown RBP3.08□□□□□ -1.92
UBE2D3-206ENST00000357194 MIR22HGQ0VDD5 57 aa3.07□□□□□ -1.92
UBE2D3-206ENST00000357194 KRTAP6-1Q3LI64 71 aa3.07□□□□□ -1.92
UBE2D3-206ENST00000357194 PSPHP1O15172 72 aa3.06□□□□□ -1.92
UBE2D3-206ENST00000357194 MT1AP04731 61 aa3.06□□□□□ -1.92
UBE2D3-206ENST00000357194 MUC5BQ9HC84 5762 aaPredicted RBP3.06□□□□□ -1.92
UBE2D3-206ENST00000357194 KRTAP25-1Q3LHN0 102 aa3.05□□□□□ -1.92
UBE2D3-206ENST00000357194 LCE3CQ5T5A8 94 aa3.04□□□□□ -1.92
UBE2D3-206ENST00000357194 Q1T7F1 81 aa3.02□□□□□ -1.93
UBE2D3-206ENST00000357194 V9GYY9 64 aa3.01□□□□□ -1.93
UBE2D3-206ENST00000357194 PRAC1Q96KF2 57 aa3□□□□□ -1.93
UBE2D3-206ENST00000357194 KRTAP6-2Q3LI66 62 aa2.98□□□□□ -1.93
UBE2D3-206ENST00000357194 K7ERS5 55 aa2.95□□□□□ -1.94
UBE2D3-206ENST00000357194 A6NED7 52 aa2.93□□□□□ -1.94
UBE2D3-206ENST00000357194 RPS28P62857 69 aaKnown RBP2.89□□□□□ -1.95
UBE2D3-206ENST00000357194 KRTAP9-6A8MVA2 160 aa2.88□□□□□ -1.95
UBE2D3-206ENST00000357194 CDC42SE1Q9NRR8 79 aa2.83□□□□□ -1.96
UBE2D3-206ENST00000357194 ROMO1P60602 79 aa2.8□□□□□ -1.96
UBE2D3-206ENST00000357194 LCE1FQ5T754 118 aa2.7□□□□□ -1.98
UBE2D3-206ENST00000357194 NDUFAF8A1L188 74 aa2.63□□□□□ -1.99
UBE2D3-206ENST00000357194 BRK1Q8WUW1 75 aa2.56□□□□□ -2
UBE2D3-206ENST00000357194 LCE1BQ5T7P3 118 aa2.53□□□□□ -2
UBE2D3-206ENST00000357194 LCE1CQ5T751 118 aa2.46□□□□□ -2.02
UBE2D3-206ENST00000357194 PMAIP1Q13794 54 aa2.4□□□□□ -2.03
UBE2D3-206ENST00000357194 PRO0628Q9UI54 55 aa2.37□□□□□ -2.03
UBE2D3-206ENST00000357194 LCE3EQ5T5B0 92 aa2.33□□□□□ -2.04
UBE2D3-206ENST00000357194 LUZP6Q538Z0 58 aa2.29□□□□□ -2.04
UBE2D3-206ENST00000357194 PHGR1C9JFL3 82 aa2.17□□□□□ -2.06
UBE2D3-206ENST00000357194 LCE3DQ9BYE3 92 aa2.14□□□□□ -2.07
UBE2D3-206ENST00000357194 KTN1-AS1Q86SY8 53 aa2.12□□□□□ -2.07
UBE2D3-206ENST00000357194 KRTAP21-2Q3LI59 83 aa2.03□□□□□ -2.08
UBE2D3-206ENST00000357194 MUC19Q7Z5P9 8384 aa1.95□□□□□ -2.1
UBE2D3-206ENST00000357194 KRTAP21-1Q3LI58 79 aa1.64□□□□□ -2.15
UBE2D3-206ENST00000357194 PRM1P04553 51 aa1.46□□□□□ -2.18
UBE2D3-206ENST00000357194 INE1O15225 51 aa1.41□□□□□ -2.18
UBE2D3-206ENST00000357194 MUC16Q8WXI7 14507 aa1.35□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 13 ms