RNA–Protein interactions for RNA: ENST00000354268.8

SMARCAD1-201, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-201ENST00000354268 COL7A1Q02388 2944 aa0.79□□□□□ -2.28
SMARCAD1-201ENST00000354268 CHD9Q3L8U1 2897 aa0.79□□□□□ -2.28
SMARCAD1-201ENST00000354268 MGAQ8IWI9 3026 aa0.78□□□□□ -2.28
SMARCAD1-201ENST00000354268 MT2AP02795 61 aa0.78□□□□□ -2.28
SMARCAD1-201ENST00000354268 SSPOA2VEC9 5147 aa0.78□□□□□ -2.28
SMARCAD1-201ENST00000354268 ITPR1Q14643 2758 aa0.78□□□□□ -2.28
SMARCAD1-201ENST00000354268 KRTAP13-1Q8IUC0 172 aa0.77□□□□□ -2.29
SMARCAD1-201ENST00000354268 TENM2Q9NT68 2774 aa0.75□□□□□ -2.29
SMARCAD1-201ENST00000354268 IGIPA6NJ69 53 aa0.75□□□□□ -2.29
SMARCAD1-201ENST00000354268 WDR87Q6ZQQ6 2873 aa0.75□□□□□ -2.29
SMARCAD1-201ENST00000354268 PKD1L1Q8TDX9 2849 aa0.75□□□□□ -2.29
SMARCAD1-201ENST00000354268 CFAP46Q8IYW2 2715 aa0.75□□□□□ -2.29
SMARCAD1-201ENST00000354268 COL12A1Q99715 3063 aa0.75□□□□□ -2.29
SMARCAD1-201ENST00000354268 FRYLO94915 3013 aa0.74□□□□□ -2.29
SMARCAD1-201ENST00000354268 DMXL2Q8TDJ6 3036 aa0.74□□□□□ -2.29
SMARCAD1-201ENST00000354268 MUC5ACP98088 5654 aa0.74□□□□□ -2.29
SMARCAD1-201ENST00000354268 NBEAL2Q6ZNJ1 2754 aa0.74□□□□□ -2.29
SMARCAD1-201ENST00000354268 MUC19Q7Z5P9 8384 aa0.73□□□□□ -2.29
SMARCAD1-201ENST00000354268 INE1O15225 51 aa0.73□□□□□ -2.29
SMARCAD1-201ENST00000354268 ITPR3Q14573 2671 aa0.73□□□□□ -2.29
SMARCAD1-201ENST00000354268 LCE1BQ5T7P3 118 aa0.73□□□□□ -2.29
SMARCAD1-201ENST00000354268 KRTAP19-8Q3LI54 63 aa0.72□□□□□ -2.29
SMARCAD1-201ENST00000354268 C18orf32Q8TCD1 76 aa0.72□□□□□ -2.29
SMARCAD1-201ENST00000354268 LRBAP50851 2863 aa0.72□□□□□ -2.29
SMARCAD1-201ENST00000354268 TACC2O95359 2948 aa0.72□□□□□ -2.29
SMARCAD1-201ENST00000354268 DSPP15924 2871 aaKnown RBP0.72□□□□□ -2.29
SMARCAD1-201ENST00000354268 LINC01558Q9Y6Z2 57 aa0.72□□□□□ -2.29
SMARCAD1-201ENST00000354268 KRTAP12-3P60328 96 aa0.72□□□□□ -2.29
SMARCAD1-201ENST00000354268 KRTAP21-1Q3LI58 79 aa0.72□□□□□ -2.29
SMARCAD1-201ENST00000354268 PIEZO2Q9H5I5 2752 aa0.72□□□□□ -2.29
SMARCAD1-201ENST00000354268 DYNC1H1Q14204 4646 aaKnown RBP0.72□□□□□ -2.29
SMARCAD1-201ENST00000354268 CRIP1P50238 77 aa0.71□□□□□ -2.3
SMARCAD1-201ENST00000354268 MT1MQ8N339 61 aa0.7□□□□□ -2.3
SMARCAD1-201ENST00000354268 LPAP08519 4548 aa0.7□□□□□ -2.3
SMARCAD1-201ENST00000354268 PHGR1C9JFL3 82 aa0.7□□□□□ -2.3
SMARCAD1-201ENST00000354268 FCGBPQ9Y6R7 5405 aaPredicted RBP0.7□□□□□ -2.3
SMARCAD1-201ENST00000354268 RNF213Q63HN8 5207 aa0.69□□□□□ -2.3
SMARCAD1-201ENST00000354268 NBEAL1Q6ZS30 2694 aa0.69□□□□□ -2.3
SMARCAD1-201ENST00000354268 ATMQ13315 3056 aa0.69□□□□□ -2.3
SMARCAD1-201ENST00000354268 TGP01266 2768 aa0.69□□□□□ -2.3
SMARCAD1-201ENST00000354268 ADGRG4Q8IZF6 3080 aa0.68□□□□□ -2.3
SMARCAD1-201ENST00000354268 DSTQ03001 7570 aaKnown RBP0.68□□□□□ -2.3
SMARCAD1-201ENST00000354268 MXRA5Q9NR99 2828 aa0.67□□□□□ -2.3
SMARCAD1-201ENST00000354268 NSD1Q96L73 2696 aaPredicted RBP0.67□□□□□ -2.3
SMARCAD1-201ENST00000354268 UTP20O75691 2785 aaKnown RBP0.67□□□□□ -2.3
SMARCAD1-201ENST00000354268 LAMA1P25391 3075 aa0.65□□□□□ -2.3
SMARCAD1-201ENST00000354268 LCE3AQ5TA76 89 aa0.64□□□□□ -2.31
SMARCAD1-201ENST00000354268 AKAP13Q12802 2813 aa0.64□□□□□ -2.31
SMARCAD1-201ENST00000354268 MAP1AP78559 2803 aaPredicted RBP0.63□□□□□ -2.31
SMARCAD1-201ENST00000354268 MT1AP04731 61 aa0.63□□□□□ -2.31
SMARCAD1-201ENST00000354268 DCHS2Q6V1P9 2916 aa0.63□□□□□ -2.31
SMARCAD1-201ENST00000354268 MT1LQ93083 61 aa0.62□□□□□ -2.31
SMARCAD1-201ENST00000354268 KRTAP21-2Q3LI59 83 aa0.61□□□□□ -2.31
SMARCAD1-201ENST00000354268 KRTAP6-1Q3LI64 71 aa0.61□□□□□ -2.31
SMARCAD1-201ENST00000354268 KRTAP5-10Q6L8G5 202 aa0.61□□□□□ -2.31
SMARCAD1-201ENST00000354268 MT1EP04732 61 aa0.6□□□□□ -2.31
SMARCAD1-201ENST00000354268 APCP25054 2843 aa0.6□□□□□ -2.31
SMARCAD1-201ENST00000354268 MUC12Q9UKN1 5478 aa0.59□□□□□ -2.31
SMARCAD1-201ENST00000354268 KRTAP12-1P59990 96 aa0.59□□□□□ -2.31
SMARCAD1-201ENST00000354268 FLNCQ14315 2725 aa0.59□□□□□ -2.31
SMARCAD1-201ENST00000354268 MT1XP80297 61 aa0.59□□□□□ -2.31
SMARCAD1-201ENST00000354268 HIVEP1P15822 2718 aa0.59□□□□□ -2.31
SMARCAD1-201ENST00000354268 KRTAP20-2Q3LI61 65 aa0.59□□□□□ -2.32
SMARCAD1-201ENST00000354268 ITPR2Q14571 2701 aa0.57□□□□□ -2.32
SMARCAD1-201ENST00000354268 KRTAP4-1Q9BYQ7 146 aa0.56□□□□□ -2.32
SMARCAD1-201ENST00000354268 KRTAP19-5Q3LI72 72 aa0.55□□□□□ -2.32
SMARCAD1-201ENST00000354268 USH2AO75445 5202 aa0.55□□□□□ -2.32
SMARCAD1-201ENST00000354268 MUC17Q685J3 4493 aa0.55□□□□□ -2.32
SMARCAD1-201ENST00000354268 MUC16Q8WXI7 14507 aa0.54□□□□□ -2.32
SMARCAD1-201ENST00000354268 SYNE1Q8NF91 8797 aaKnown RBP0.52□□□□□ -2.33
SMARCAD1-201ENST00000354268 KRTAP19-7Q3SYF9 63 aa0.5□□□□□ -2.33
SMARCAD1-201ENST00000354268 HRNRQ86YZ3 2850 aaPredicted RBP0.48□□□□□ -2.33
SMARCAD1-201ENST00000354268 CENPEQ02224 2701 aa0.47□□□□□ -2.33
SMARCAD1-201ENST00000354268 SRRM2Q9UQ35 2752 aaKnown RBP0.46□□□□□ -2.34
SMARCAD1-201ENST00000354268 KRTAP6-2Q3LI66 62 aa0.44□□□□□ -2.34
SMARCAD1-201ENST00000354268 KRTAP19-2Q3LHN2 52 aa0.33□□□□□ -2.36
SMARCAD1-201ENST00000354268 PRM1P04553 51 aa0.31□□□□□ -2.36
Retrieved 77 of 20,778 RNA–protein pairs in 10.1 ms