RNA–Protein interactions for RNA: ENST00000352957.8

MRPL39-202, Transcript of mitochondrial ribosomal protein L39, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MRPL39, Length 1,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL39-202ENST00000352957 H3BS24 57 aa7.69□□□□□ -1.18
MRPL39-202ENST00000352957 C10orf95Q9H7T3 257 aa7.67□□□□□ -1.18
MRPL39-202ENST00000352957 KRTAP19-5Q3LI72 72 aa7.66□□□□□ -1.18
MRPL39-202ENST00000352957 KRTAP19-3Q7Z4W3 81 aa7.65□□□□□ -1.18
MRPL39-202ENST00000352957 UQCR11O14957 56 aa7.6□□□□□ -1.19
MRPL39-202ENST00000352957 TNP1P09430 55 aa7.59□□□□□ -1.19
MRPL39-202ENST00000352957 LCE3AQ5TA76 89 aa7.55□□□□□ -1.2
MRPL39-202ENST00000352957 MT1GP13640 62 aa7.47□□□□□ -1.21
MRPL39-202ENST00000352957 MIR22HGQ0VDD5 57 aa7.45□□□□□ -1.22
MRPL39-202ENST00000352957 MT1LQ93083 61 aa7.43□□□□□ -1.22
MRPL39-202ENST00000352957 PP632Q6XCG6 107 aa7.4□□□□□ -1.22
MRPL39-202ENST00000352957 DSTQ03001 7570 aaKnown RBP7.39□□□□□ -1.23
MRPL39-202ENST00000352957 PSPHP1O15172 72 aa7.39□□□□□ -1.23
MRPL39-202ENST00000352957 V9GYY9 64 aa7.39□□□□□ -1.23
MRPL39-202ENST00000352957 MT1MQ8N339 61 aa7.37□□□□□ -1.23
MRPL39-202ENST00000352957 Q1T7F1 81 aa7.36□□□□□ -1.23
MRPL39-202ENST00000352957 K7ERS5 55 aa7.27□□□□□ -1.25
MRPL39-202ENST00000352957 KRTAP12-3P60328 96 aa7.24□□□□□ -1.25
MRPL39-202ENST00000352957 KRTAP25-1Q3LHN0 102 aa7.22□□□□□ -1.25
MRPL39-202ENST00000352957 KRTAP4-3Q9BYR4 195 aa7.22□□□□□ -1.25
MRPL39-202ENST00000352957 A6NED7 52 aa7.13□□□□□ -1.27
MRPL39-202ENST00000352957 PCP4P48539 62 aa7.05□□□□□ -1.28
MRPL39-202ENST00000352957 RPS28P62857 69 aaKnown RBP7.04□□□□□ -1.28
MRPL39-202ENST00000352957 MT4P47944 62 aa6.98□□□□□ -1.29
MRPL39-202ENST00000352957 KRTAP5-4Q6L8H1 288 aa6.95□□□□□ -1.3
MRPL39-202ENST00000352957 KRTAP23-1A1A580 65 aa6.94□□□□□ -1.3
MRPL39-202ENST00000352957 CDC42SE1Q9NRR8 79 aa6.91□□□□□ -1.3
MRPL39-202ENST00000352957 HMCN1Q96RW7 5635 aa6.82□□□□□ -1.32
MRPL39-202ENST00000352957 ROMO1P60602 79 aa6.81□□□□□ -1.32
MRPL39-202ENST00000352957 KRTAP15-1Q3LI76 137 aa6.81□□□□□ -1.32
MRPL39-202ENST00000352957 KRTAP5-5Q701N2 237 aaPredicted RBP6.74□□□□□ -1.33
MRPL39-202ENST00000352957 GPR98Q8WXG9 6306 aa6.7□□□□□ -1.34
MRPL39-202ENST00000352957 LCE3CQ5T5A8 94 aa6.68□□□□□ -1.34
MRPL39-202ENST00000352957 KRTAP20-2Q3LI61 65 aa6.56□□□□□ -1.36
MRPL39-202ENST00000352957 AHNAK2Q8IVF2 5795 aa6.52□□□□□ -1.37
MRPL39-202ENST00000352957 SPRR5A0A1B0GTR4 108 aa6.52□□□□□ -1.37
MRPL39-202ENST00000352957 KRTAP12-4P60329 112 aa6.52□□□□□ -1.37
MRPL39-202ENST00000352957 KRTAP5-10Q6L8G5 202 aa6.47□□□□□ -1.37
MRPL39-202ENST00000352957 SYNE1Q8NF91 8797 aaKnown RBP6.34□□□□□ -1.39
MRPL39-202ENST00000352957 KRTAP9-6A8MVA2 160 aa6.32□□□□□ -1.4
MRPL39-202ENST00000352957 MT1AP04731 61 aa6.31□□□□□ -1.4
MRPL39-202ENST00000352957 KRTAP6-1Q3LI64 71 aa6.28□□□□□ -1.4
MRPL39-202ENST00000352957 BRK1Q8WUW1 75 aa6.22□□□□□ -1.41
MRPL39-202ENST00000352957 KRTAP5-7Q6L8G8 165 aa6.19□□□□□ -1.42
MRPL39-202ENST00000352957 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.18□□□□□ -1.42
MRPL39-202ENST00000352957 KRTAP5-2Q701N4 177 aa6.11□□□□□ -1.43
MRPL39-202ENST00000352957 KRTAP5-11Q6L8G4 156 aa6.05□□□□□ -1.44
MRPL39-202ENST00000352957 KRTAP6-2Q3LI66 62 aa5.97□□□□□ -1.45
MRPL39-202ENST00000352957 PMAIP1Q13794 54 aa5.84□□□□□ -1.47
MRPL39-202ENST00000352957 MT3P25713 68 aa5.76□□□□□ -1.49
MRPL39-202ENST00000352957 KRTAP5-8O75690 187 aa5.75□□□□□ -1.49
MRPL39-202ENST00000352957 PRAC1Q96KF2 57 aa5.65□□□□□ -1.5
MRPL39-202ENST00000352957 OBSCNQ5VST9 7968 aa5.6□□□□□ -1.51
MRPL39-202ENST00000352957 LCE1EQ5T753 118 aa5.48□□□□□ -1.53
MRPL39-202ENST00000352957 KRTAP5-1Q6L8H4 278 aa5.46□□□□□ -1.54
MRPL39-202ENST00000352957 PRO0628Q9UI54 55 aa5.44□□□□□ -1.54
MRPL39-202ENST00000352957 SVIPQ8NHG7 77 aa5.34□□□□□ -1.55
MRPL39-202ENST00000352957 MUC5ACP98088 5654 aa5.33□□□□□ -1.56
MRPL39-202ENST00000352957 MUC5BQ9HC84 5762 aaPredicted RBP5.31□□□□□ -1.56
MRPL39-202ENST00000352957 AHNAKQ09666 5890 aaKnown RBP5.27□□□□□ -1.57
MRPL39-202ENST00000352957 KTN1-AS1Q86SY8 53 aa5.21□□□□□ -1.58
MRPL39-202ENST00000352957 KRTAP4-4Q9BYR3 166 aa5.19□□□□□ -1.58
MRPL39-202ENST00000352957 LCE1BQ5T7P3 118 aa4.96□□□□□ -1.62
MRPL39-202ENST00000352957 LCE1CQ5T751 118 aa4.88□□□□□ -1.63
MRPL39-202ENST00000352957 LCE3DQ9BYE3 92 aa4.83□□□□□ -1.64
MRPL39-202ENST00000352957 LUZP6Q538Z0 58 aa4.71□□□□□ -1.66
MRPL39-202ENST00000352957 LCE3EQ5T5B0 92 aa4.57□□□□□ -1.68
MRPL39-202ENST00000352957 LCE1FQ5T754 118 aa4.4□□□□□ -1.71
MRPL39-202ENST00000352957 A0A0A0MQY5 61 aa4.22□□□□□ -1.73
MRPL39-202ENST00000352957 KRTAP21-2Q3LI59 83 aa4.13□□□□□ -1.75
MRPL39-202ENST00000352957 NDUFAF8A1L188 74 aa3.84□□□□□ -1.79
MRPL39-202ENST00000352957 PHGR1C9JFL3 82 aa3.81□□□□□ -1.8
MRPL39-202ENST00000352957 PRM1P04553 51 aa3.5□□□□□ -1.85
MRPL39-202ENST00000352957 MUC19Q7Z5P9 8384 aa3.43□□□□□ -1.86
MRPL39-202ENST00000352957 INE1O15225 51 aa3.06□□□□□ -1.92
MRPL39-202ENST00000352957 KRTAP21-1Q3LI58 79 aa2.84□□□□□ -1.95
MRPL39-202ENST00000352957 MUC16Q8WXI7 14507 aa2.51□□□□□ -2.01
Retrieved 77 of 20,778 RNA–protein pairs in 67 ms