RNA–Protein interactions for RNA: ENST00000350896.3

MSR1-202, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 5 BASIC

Gene MSR1, Length 3,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-202ENST00000350896 KRTAP19-5Q3LI72 72 aa2.44□□□□□ -2.02
MSR1-202ENST00000350896 MT1BP07438 61 aa2.43□□□□□ -2.02
MSR1-202ENST00000350896 KRTAP5-3Q6L8H2 238 aa2.43□□□□□ -2.02
MSR1-202ENST00000350896 SYNE2Q8WXH0 6885 aaKnown RBP2.4□□□□□ -2.02
MSR1-202ENST00000350896 KRTAP9-9Q9BYP9 154 aa2.4□□□□□ -2.03
MSR1-202ENST00000350896 KRTAP9-4Q9BYQ2 154 aa2.4□□□□□ -2.03
MSR1-202ENST00000350896 LCE1DQ5T752 114 aa2.4□□□□□ -2.03
MSR1-202ENST00000350896 KRTAP4-9Q9BYQ8 210 aa2.37□□□□□ -2.03
MSR1-202ENST00000350896 FCGBPQ9Y6R7 5405 aaPredicted RBP2.37□□□□□ -2.03
MSR1-202ENST00000350896 KRTAP9-6A8MVA2 160 aa2.36□□□□□ -2.03
MSR1-202ENST00000350896 MACF1Q9UPN3 7388 aaKnown RBP2.35□□□□□ -2.03
MSR1-202ENST00000350896 KRTAP4-12Q9BQ66 201 aa2.34□□□□□ -2.03
MSR1-202ENST00000350896 LCE4AQ5TA78 99 aa2.33□□□□□ -2.04
MSR1-202ENST00000350896 KRTAP9-3Q9BYQ3 159 aa2.33□□□□□ -2.04
MSR1-202ENST00000350896 KRTAP4-2Q9BYR5 136 aa2.33□□□□□ -2.04
MSR1-202ENST00000350896 KRTAP2-2Q9BYT5 123 aa2.32□□□□□ -2.04
MSR1-202ENST00000350896 MUC12Q9UKN1 5478 aa2.31□□□□□ -2.04
MSR1-202ENST00000350896 MT1EP04732 61 aa2.31□□□□□ -2.04
MSR1-202ENST00000350896 OBSCNQ5VST9 7968 aa2.28□□□□□ -2.04
MSR1-202ENST00000350896 DSTQ03001 7570 aaKnown RBP2.27□□□□□ -2.05
MSR1-202ENST00000350896 KRTAP12-4P60329 112 aa2.26□□□□□ -2.05
MSR1-202ENST00000350896 MT1LQ93083 61 aa2.25□□□□□ -2.05
MSR1-202ENST00000350896 MDN1Q9NU22 5596 aa2.24□□□□□ -2.05
MSR1-202ENST00000350896 MT1AP04731 61 aa2.23□□□□□ -2.05
MSR1-202ENST00000350896 KRTAP19-7Q3SYF9 63 aa2.23□□□□□ -2.05
MSR1-202ENST00000350896 CRCT1Q9UGL9 99 aa2.21□□□□□ -2.06
MSR1-202ENST00000350896 KRTAP4-11Q9BYQ6 195 aa2.18□□□□□ -2.06
MSR1-202ENST00000350896 KRTAP6-3Q3LI67 103 aa2.11□□□□□ -2.07
MSR1-202ENST00000350896 MUC5BQ9HC84 5762 aaPredicted RBP2.1□□□□□ -2.07
MSR1-202ENST00000350896 KRTAP19-6Q3LI70 58 aa2.08□□□□□ -2.08
MSR1-202ENST00000350896 LCE3EQ5T5B0 92 aa2.06□□□□□ -2.08
MSR1-202ENST00000350896 KRTAP9-7A8MTY7 169 aa2.05□□□□□ -2.08
MSR1-202ENST00000350896 MT1GP13640 62 aa2.05□□□□□ -2.08
MSR1-202ENST00000350896 SPRR2FQ96RM1 72 aa2.04□□□□□ -2.08
MSR1-202ENST00000350896 LCE3DQ9BYE3 92 aa2.03□□□□□ -2.09
MSR1-202ENST00000350896 LCE5AQ5TCM9 118 aa2.02□□□□□ -2.09
MSR1-202ENST00000350896 KRTAP5-5Q701N2 237 aaPredicted RBP2.02□□□□□ -2.09
MSR1-202ENST00000350896 SYNE1Q8NF91 8797 aaKnown RBP2.01□□□□□ -2.09
MSR1-202ENST00000350896 PRM1P04553 51 aa2.01□□□□□ -2.09
MSR1-202ENST00000350896 LCE1AQ5T7P2 110 aa2.01□□□□□ -2.09
MSR1-202ENST00000350896 MT1MQ8N339 61 aa1.99□□□□□ -2.09
MSR1-202ENST00000350896 KRTAP19-3Q7Z4W3 81 aa1.97□□□□□ -2.09
MSR1-202ENST00000350896 KRTAP4-3Q9BYR4 195 aa1.97□□□□□ -2.09
MSR1-202ENST00000350896 NEBP20929 6669 aa1.94□□□□□ -2.1
MSR1-202ENST00000350896 SPRR2EP22531 72 aa1.93□□□□□ -2.1
MSR1-202ENST00000350896 SPRR2BP35325 72 aa1.93□□□□□ -2.1
MSR1-202ENST00000350896 SPRR2AP35326 72 aa1.93□□□□□ -2.1
MSR1-202ENST00000350896 KRTAP6-2Q3LI66 62 aa1.86□□□□□ -2.11
MSR1-202ENST00000350896 LCE1EQ5T753 118 aa1.86□□□□□ -2.11
MSR1-202ENST00000350896 SPRR2DP22532 72 aa1.83□□□□□ -2.12
MSR1-202ENST00000350896 KRTAP5-9P26371 169 aa1.82□□□□□ -2.12
MSR1-202ENST00000350896 KRTAP6-1Q3LI64 71 aa1.8□□□□□ -2.12
MSR1-202ENST00000350896 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.8□□□□□ -2.12
MSR1-202ENST00000350896 LCE1FQ5T754 118 aa1.79□□□□□ -2.12
MSR1-202ENST00000350896 MT4P47944 62 aa1.73□□□□□ -2.13
MSR1-202ENST00000350896 MT3P25713 68 aa1.72□□□□□ -2.13
MSR1-202ENST00000350896 KRTAP20-1Q3LI63 56 aa1.71□□□□□ -2.14
MSR1-202ENST00000350896 GPR98Q8WXG9 6306 aa1.67□□□□□ -2.14
MSR1-202ENST00000350896 MUC19Q7Z5P9 8384 aa1.55□□□□□ -2.16
MSR1-202ENST00000350896 KRTAP5-4Q6L8H1 288 aa1.53□□□□□ -2.16
MSR1-202ENST00000350896 AHNAK2Q8IVF2 5795 aa1.5□□□□□ -2.17
MSR1-202ENST00000350896 MUC5ACP98088 5654 aa1.49□□□□□ -2.17
MSR1-202ENST00000350896 KRTAP20-2Q3LI61 65 aa1.48□□□□□ -2.17
MSR1-202ENST00000350896 KRTAP5-8O75690 187 aa1.47□□□□□ -2.17
MSR1-202ENST00000350896 KRTAP5-1Q6L8H4 278 aa1.46□□□□□ -2.18
MSR1-202ENST00000350896 KRTAP5-10Q6L8G5 202 aa1.45□□□□□ -2.18
MSR1-202ENST00000350896 KRTAP21-1Q3LI58 79 aa1.45□□□□□ -2.18
MSR1-202ENST00000350896 KRTAP5-2Q701N4 177 aa1.44□□□□□ -2.18
MSR1-202ENST00000350896 KRTAP5-11Q6L8G4 156 aa1.42□□□□□ -2.18
MSR1-202ENST00000350896 AHNAKQ09666 5890 aaKnown RBP1.38□□□□□ -2.19
MSR1-202ENST00000350896 KRTAP4-4Q9BYR3 166 aa1.37□□□□□ -2.19
MSR1-202ENST00000350896 LCE1BQ5T7P3 118 aa1.34□□□□□ -2.19
MSR1-202ENST00000350896 LCE1CQ5T751 118 aa1.3□□□□□ -2.2
MSR1-202ENST00000350896 KRTAP5-7Q6L8G8 165 aa1.27□□□□□ -2.21
MSR1-202ENST00000350896 KRTAP21-2Q3LI59 83 aa1.21□□□□□ -2.22
MSR1-202ENST00000350896 PHGR1C9JFL3 82 aa0.9□□□□□ -2.26
MSR1-202ENST00000350896 MUC16Q8WXI7 14507 aa0.72□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 170.6 ms