RNA–Protein interactions for RNA: ENST00000343420.6

CD55-202, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 5

Gene CD55, Length 978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-202ENST00000343420 GPR98Q8WXG9 6306 aa5.93□□□□□ -1.46
CD55-202ENST00000343420 TMEM258P61165 79 aa5.89□□□□□ -1.47
CD55-202ENST00000343420 LCE4AQ5TA78 99 aa5.88□□□□□ -1.47
CD55-202ENST00000343420 UQCR11O14957 56 aa5.87□□□□□ -1.47
CD55-202ENST00000343420 LCE1DQ5T752 114 aa5.87□□□□□ -1.47
CD55-202ENST00000343420 KRTAP4-3Q9BYR4 195 aa5.85□□□□□ -1.47
CD55-202ENST00000343420 MT4P47944 62 aa5.8□□□□□ -1.48
CD55-202ENST00000343420 KRTAP12-3P60328 96 aa5.8□□□□□ -1.48
CD55-202ENST00000343420 HMCN1Q96RW7 5635 aa5.79□□□□□ -1.48
CD55-202ENST00000343420 KRTAP5-4Q6L8H1 288 aa5.76□□□□□ -1.49
CD55-202ENST00000343420 MIR22HGQ0VDD5 57 aa5.72□□□□□ -1.49
CD55-202ENST00000343420 KRTAP4-7Q9BYR0 210 aa5.71□□□□□ -1.5
CD55-202ENST00000343420 KRTAP25-1Q3LHN0 102 aa5.68□□□□□ -1.5
CD55-202ENST00000343420 K7ERS5 55 aa5.64□□□□□ -1.51
CD55-202ENST00000343420 AHNAK2Q8IVF2 5795 aa5.61□□□□□ -1.51
CD55-202ENST00000343420 V9GYY9 64 aa5.6□□□□□ -1.51
CD55-202ENST00000343420 KRTAP4-12Q9BQ66 201 aa5.58□□□□□ -1.52
CD55-202ENST00000343420 PSPHP1O15172 72 aa5.57□□□□□ -1.52
CD55-202ENST00000343420 Q1T7F1 81 aa5.55□□□□□ -1.52
CD55-202ENST00000343420 KRTAP9-9Q9BYP9 154 aa5.53□□□□□ -1.52
CD55-202ENST00000343420 KRTAP9-4Q9BYQ2 154 aa5.53□□□□□ -1.52
CD55-202ENST00000343420 KRTAP5-5Q701N2 237 aaPredicted RBP5.52□□□□□ -1.53
CD55-202ENST00000343420 KRTAP19-4Q3LI73 84 aa5.5□□□□□ -1.53
CD55-202ENST00000343420 KRTAP5-10Q6L8G5 202 aa5.49□□□□□ -1.53
CD55-202ENST00000343420 KRTAP23-1A1A580 65 aa5.48□□□□□ -1.53
CD55-202ENST00000343420 KRTAP20-2Q3LI61 65 aa5.43□□□□□ -1.54
CD55-202ENST00000343420 SPRR5A0A1B0GTR4 108 aa5.42□□□□□ -1.54
CD55-202ENST00000343420 KRTAP12-4P60329 112 aa5.4□□□□□ -1.54
CD55-202ENST00000343420 KRTAP15-1Q3LI76 137 aa5.4□□□□□ -1.54
CD55-202ENST00000343420 A6NED7 52 aa5.39□□□□□ -1.55
CD55-202ENST00000343420 KRTAP5-3Q6L8H2 238 aa5.36□□□□□ -1.55
CD55-202ENST00000343420 SYNE1Q8NF91 8797 aaKnown RBP5.35□□□□□ -1.55
CD55-202ENST00000343420 LCE3CQ5T5A8 94 aa5.33□□□□□ -1.56
CD55-202ENST00000343420 CDC42SE1Q9NRR8 79 aa5.32□□□□□ -1.56
CD55-202ENST00000343420 H3BS24 57 aa5.29□□□□□ -1.56
CD55-202ENST00000343420 KRTAP5-7Q6L8G8 165 aa5.29□□□□□ -1.56
CD55-202ENST00000343420 ROMO1P60602 79 aa5.24□□□□□ -1.57
CD55-202ENST00000343420 RPS28P62857 69 aaKnown RBP5.19□□□□□ -1.58
CD55-202ENST00000343420 MT1AP04731 61 aa5.12□□□□□ -1.59
CD55-202ENST00000343420 KRTAP6-1Q3LI64 71 aa5.09□□□□□ -1.59
CD55-202ENST00000343420 KRTAP4-2Q9BYR5 136 aa5.06□□□□□ -1.6
CD55-202ENST00000343420 KRTAP5-2Q701N4 177 aa5.04□□□□□ -1.6
CD55-202ENST00000343420 KRTAP9-6A8MVA2 160 aa5.02□□□□□ -1.61
CD55-202ENST00000343420 PCP4P48539 62 aa5□□□□□ -1.61
CD55-202ENST00000343420 KRTAP4-11Q9BYQ6 195 aa4.98□□□□□ -1.61
CD55-202ENST00000343420 KRTAP6-2Q3LI66 62 aa4.87□□□□□ -1.63
CD55-202ENST00000343420 KRTAP5-8O75690 187 aa4.81□□□□□ -1.64
CD55-202ENST00000343420 OBSCNQ5VST9 7968 aa4.76□□□□□ -1.65
CD55-202ENST00000343420 MT3P25713 68 aa4.7□□□□□ -1.66
CD55-202ENST00000343420 MUC5BQ9HC84 5762 aaPredicted RBP4.63□□□□□ -1.67
CD55-202ENST00000343420 AHNAKQ09666 5890 aaKnown RBP4.62□□□□□ -1.67
CD55-202ENST00000343420 MUC5ACP98088 5654 aa4.61□□□□□ -1.67
CD55-202ENST00000343420 KRTAP5-1Q6L8H4 278 aa4.53□□□□□ -1.68
CD55-202ENST00000343420 BRK1Q8WUW1 75 aa4.52□□□□□ -1.69
CD55-202ENST00000343420 LCE1EQ5T753 118 aa4.33□□□□□ -1.72
CD55-202ENST00000343420 SVIPQ8NHG7 77 aa4.33□□□□□ -1.72
CD55-202ENST00000343420 PMAIP1Q13794 54 aa4.24□□□□□ -1.73
CD55-202ENST00000343420 PRAC1Q96KF2 57 aa4.11□□□□□ -1.75
CD55-202ENST00000343420 LCE1BQ5T7P3 118 aa4.06□□□□□ -1.76
CD55-202ENST00000343420 LCE1CQ5T751 118 aa4.01□□□□□ -1.77
CD55-202ENST00000343420 LCE3DQ9BYE3 92 aa3.83□□□□□ -1.8
CD55-202ENST00000343420 PRO0628Q9UI54 55 aa3.83□□□□□ -1.8
CD55-202ENST00000343420 KTN1-AS1Q86SY8 53 aa3.7□□□□□ -1.82
CD55-202ENST00000343420 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.65□□□□□ -1.83
CD55-202ENST00000343420 KRTAP5-11Q6L8G4 156 aa3.64□□□□□ -1.83
CD55-202ENST00000343420 LCE3EQ5T5B0 92 aa3.6□□□□□ -1.83
CD55-202ENST00000343420 LCE1FQ5T754 118 aa3.57□□□□□ -1.84
CD55-202ENST00000343420 LUZP6Q538Z0 58 aa3.51□□□□□ -1.85
CD55-202ENST00000343420 A0A0A0MQY5 61 aa3.38□□□□□ -1.87
CD55-202ENST00000343420 KRTAP21-2Q3LI59 83 aa3.36□□□□□ -1.87
CD55-202ENST00000343420 PHGR1C9JFL3 82 aa3.2□□□□□ -1.9
CD55-202ENST00000343420 KRTAP4-4Q9BYR3 166 aa3.07□□□□□ -1.92
CD55-202ENST00000343420 MUC19Q7Z5P9 8384 aa2.96□□□□□ -1.94
CD55-202ENST00000343420 NDUFAF8A1L188 74 aa2.72□□□□□ -1.97
CD55-202ENST00000343420 PRM1P04553 51 aa2.67□□□□□ -1.98
CD55-202ENST00000343420 KRTAP21-1Q3LI58 79 aa2.43□□□□□ -2.02
CD55-202ENST00000343420 INE1O15225 51 aa2.13□□□□□ -2.07
CD55-202ENST00000343420 MUC16Q8WXI7 14507 aa2.11□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 90.7 ms