RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 COX7CP15954 63 aa5.37□□□□□ -1.55
TRA2B-202ENST00000342294 ANAPC13Q9BS18 74 aa5.37□□□□□ -1.55
TRA2B-202ENST00000342294 MUC5ACP98088 5654 aa5.36□□□□□ -1.55
TRA2B-202ENST00000342294 LOC100996750A0A140TA64 210 aa5.36□□□□□ -1.55
TRA2B-202ENST00000342294 TNP1P09430 55 aa5.36□□□□□ -1.55
TRA2B-202ENST00000342294 KRTAP12-3P60328 96 aa5.35□□□□□ -1.55
TRA2B-202ENST00000342294 SNURFQ9Y675 71 aa5.35□□□□□ -1.55
TRA2B-202ENST00000342294 KRTAP5-8O75690 187 aa5.33□□□□□ -1.56
TRA2B-202ENST00000342294 KRTAP5-2Q701N4 177 aa5.3□□□□□ -1.56
TRA2B-202ENST00000342294 A0A1B0GU33 70 aa5.29□□□□□ -1.56
TRA2B-202ENST00000342294 SERP1Q9Y6X1 66 aa5.29□□□□□ -1.56
TRA2B-202ENST00000342294 MUC5BQ9HC84 5762 aaPredicted RBP5.28□□□□□ -1.56
TRA2B-202ENST00000342294 SPANXA2-OT1Q8N9U9 137 aa5.28□□□□□ -1.56
TRA2B-202ENST00000342294 SEC61GP60059 68 aa5.27□□□□□ -1.57
TRA2B-202ENST00000342294 CCDC179H3BU77 68 aa5.25□□□□□ -1.57
TRA2B-202ENST00000342294 H7BZZ5 65 aa5.21□□□□□ -1.58
TRA2B-202ENST00000342294 COA5Q86WW8 74 aa5.16□□□□□ -1.58
TRA2B-202ENST00000342294 SMIM26A0A096LP01 95 aa5.12□□□□□ -1.59
TRA2B-202ENST00000342294 A8MU10 97 aa5.12□□□□□ -1.59
TRA2B-202ENST00000342294 KRTAP9-9Q9BYP9 154 aa5.12□□□□□ -1.59
TRA2B-202ENST00000342294 PCP4P48539 62 aa5.1□□□□□ -1.59
TRA2B-202ENST00000342294 ATP5EP56381 51 aaPredicted RBP5.08□□□□□ -1.6
TRA2B-202ENST00000342294 TMEM258P61165 79 aa5.08□□□□□ -1.6
TRA2B-202ENST00000342294 KRTAP6-1Q3LI64 71 aa5.06□□□□□ -1.6
TRA2B-202ENST00000342294 OBSCNQ5VST9 7968 aa5.05□□□□□ -1.6
TRA2B-202ENST00000342294 MT1AP04731 61 aa5.04□□□□□ -1.6
TRA2B-202ENST00000342294 KRTAP19-4Q3LI73 84 aa5.02□□□□□ -1.61
TRA2B-202ENST00000342294 KRTAP6-2Q3LI66 62 aa4.94□□□□□ -1.62
TRA2B-202ENST00000342294 KRTAP9-4Q9BYQ2 154 aa4.94□□□□□ -1.62
TRA2B-202ENST00000342294 A0A1B0GU69 56 aa4.89□□□□□ -1.63
TRA2B-202ENST00000342294 LCE3CQ5T5A8 94 aa4.87□□□□□ -1.63
TRA2B-202ENST00000342294 KRTAP5-1Q6L8H4 278 aa4.87□□□□□ -1.63
TRA2B-202ENST00000342294 KRTAP25-1Q3LHN0 102 aa4.82□□□□□ -1.64
TRA2B-202ENST00000342294 RPS28P62857 69 aaKnown RBP4.79□□□□□ -1.64
TRA2B-202ENST00000342294 KRTAP15-1Q3LI76 137 aa4.79□□□□□ -1.64
TRA2B-202ENST00000342294 LINC01558Q9Y6Z2 57 aa4.79□□□□□ -1.64
TRA2B-202ENST00000342294 PRR15LQ9BU68 103 aa4.77□□□□□ -1.65
TRA2B-202ENST00000342294 V9GYY9 64 aa4.74□□□□□ -1.65
TRA2B-202ENST00000342294 Q1T7F1 81 aa4.72□□□□□ -1.65
TRA2B-202ENST00000342294 KRTAP9-6A8MVA2 160 aa4.66□□□□□ -1.66
TRA2B-202ENST00000342294 PSPHP1O15172 72 aa4.65□□□□□ -1.67
TRA2B-202ENST00000342294 MT3P25713 68 aa4.63□□□□□ -1.67
TRA2B-202ENST00000342294 UQCR11O14957 56 aa4.61□□□□□ -1.67
TRA2B-202ENST00000342294 KRTAP23-1A1A580 65 aa4.57□□□□□ -1.68
TRA2B-202ENST00000342294 MIR22HGQ0VDD5 57 aa4.53□□□□□ -1.68
TRA2B-202ENST00000342294 A6NED7 52 aa4.51□□□□□ -1.69
TRA2B-202ENST00000342294 LCE1EQ5T753 118 aa4.42□□□□□ -1.7
TRA2B-202ENST00000342294 K7ERS5 55 aa4.4□□□□□ -1.71
TRA2B-202ENST00000342294 CDC42SE1Q9NRR8 79 aa4.39□□□□□ -1.71
TRA2B-202ENST00000342294 BRK1Q8WUW1 75 aa4.27□□□□□ -1.73
TRA2B-202ENST00000342294 KRTAP4-2Q9BYR5 136 aa4.25□□□□□ -1.73
TRA2B-202ENST00000342294 LCE1BQ5T7P3 118 aa4.17□□□□□ -1.74
TRA2B-202ENST00000342294 ROMO1P60602 79 aa4.15□□□□□ -1.75
TRA2B-202ENST00000342294 LCE1CQ5T751 118 aa4.1□□□□□ -1.75
TRA2B-202ENST00000342294 KRTAP4-12Q9BQ66 201 aa4.05□□□□□ -1.76
TRA2B-202ENST00000342294 PRO0628Q9UI54 55 aa4.05□□□□□ -1.76
TRA2B-202ENST00000342294 PMAIP1Q13794 54 aa4.04□□□□□ -1.76
TRA2B-202ENST00000342294 KRTAP5-11Q6L8G4 156 aa3.88□□□□□ -1.79
TRA2B-202ENST00000342294 LCE1FQ5T754 118 aa3.81□□□□□ -1.8
TRA2B-202ENST00000342294 KTN1-AS1Q86SY8 53 aa3.79□□□□□ -1.8
TRA2B-202ENST00000342294 PRAC1Q96KF2 57 aa3.79□□□□□ -1.8
TRA2B-202ENST00000342294 PHGR1C9JFL3 82 aa3.72□□□□□ -1.81
TRA2B-202ENST00000342294 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.67□□□□□ -1.82
TRA2B-202ENST00000342294 SVIPQ8NHG7 77 aa3.59□□□□□ -1.83
TRA2B-202ENST00000342294 LCE3DQ9BYE3 92 aa3.37□□□□□ -1.87
TRA2B-202ENST00000342294 KRTAP21-2Q3LI59 83 aa3.36□□□□□ -1.87
TRA2B-202ENST00000342294 LUZP6Q538Z0 58 aa3.17□□□□□ -1.9
TRA2B-202ENST00000342294 MUC19Q7Z5P9 8384 aa3.15□□□□□ -1.91
TRA2B-202ENST00000342294 KRTAP4-4Q9BYR3 166 aa3.14□□□□□ -1.91
TRA2B-202ENST00000342294 LCE3EQ5T5B0 92 aa3.07□□□□□ -1.92
TRA2B-202ENST00000342294 NDUFAF8A1L188 74 aa2.89□□□□□ -1.95
TRA2B-202ENST00000342294 KRTAP21-1Q3LI58 79 aa2.84□□□□□ -1.95
TRA2B-202ENST00000342294 A0A0A0MQY5 61 aa2.49□□□□□ -2.01
TRA2B-202ENST00000342294 INE1O15225 51 aa2.39□□□□□ -2.03
TRA2B-202ENST00000342294 MUC16Q8WXI7 14507 aa2.21□□□□□ -2.06
TRA2B-202ENST00000342294 PRM1P04553 51 aa2.14□□□□□ -2.07
TRA2B-202ENST00000342294 H3BS24 57 aa2.08□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 42.5 ms