RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 KRTAP20-2Q3LI61 65 aa5.69□□□□□ -1.5
NECTIN1-202ENST00000340882 KRTAP13-4Q3LI77 160 aa5.68□□□□□ -1.5
NECTIN1-202ENST00000340882 COA5Q86WW8 74 aa5.63□□□□□ -1.51
NECTIN1-202ENST00000340882 BRK1Q8WUW1 75 aa5.61□□□□□ -1.51
NECTIN1-202ENST00000340882 LINC01558Q9Y6Z2 57 aa5.54□□□□□ -1.52
NECTIN1-202ENST00000340882 PSPHP1O15172 72 aa5.53□□□□□ -1.52
NECTIN1-202ENST00000340882 ACYP2P14621 99 aa5.53□□□□□ -1.52
NECTIN1-202ENST00000340882 KRTAP4-7Q9BYR0 210 aa5.53□□□□□ -1.52
NECTIN1-202ENST00000340882 PRR15LQ9BU68 103 aa5.52□□□□□ -1.53
NECTIN1-202ENST00000340882 CHKB-CPT1BH3BT56 60 aa5.48□□□□□ -1.53
NECTIN1-202ENST00000340882 KRTAP5-5Q701N2 237 aaPredicted RBP5.47□□□□□ -1.53
NECTIN1-202ENST00000340882 SPTSSBQ8NFR3 76 aa5.47□□□□□ -1.53
NECTIN1-202ENST00000340882 A6NED7 52 aa5.44□□□□□ -1.54
NECTIN1-202ENST00000340882 C10orf95Q9H7T3 257 aa5.44□□□□□ -1.54
NECTIN1-202ENST00000340882 CDC42SE1Q9NRR8 79 aa5.43□□□□□ -1.54
NECTIN1-202ENST00000340882 KRTAP12-4P60329 112 aa5.4□□□□□ -1.54
NECTIN1-202ENST00000340882 LCE3AQ5TA76 89 aa5.39□□□□□ -1.55
NECTIN1-202ENST00000340882 SYNE1Q8NF91 8797 aaKnown RBP5.37□□□□□ -1.55
NECTIN1-202ENST00000340882 A0A1B0GU69 56 aa5.34□□□□□ -1.55
NECTIN1-202ENST00000340882 KRTAP4-11Q9BYQ6 195 aa5.33□□□□□ -1.56
NECTIN1-202ENST00000340882 AHNAKQ09666 5890 aaKnown RBP5.32□□□□□ -1.56
NECTIN1-202ENST00000340882 PMAIP1Q13794 54 aa5.31□□□□□ -1.56
NECTIN1-202ENST00000340882 SPINT4Q6UDR6 99 aa5.31□□□□□ -1.56
NECTIN1-202ENST00000340882 MUC5ACP98088 5654 aa5.31□□□□□ -1.56
NECTIN1-202ENST00000340882 MUC5BQ9HC84 5762 aaPredicted RBP5.27□□□□□ -1.57
NECTIN1-202ENST00000340882 UQCR11O14957 56 aa5.27□□□□□ -1.57
NECTIN1-202ENST00000340882 KTN1-AS1Q86SY8 53 aa5.27□□□□□ -1.57
NECTIN1-202ENST00000340882 LOC100996750A0A140TA64 210 aa5.26□□□□□ -1.57
NECTIN1-202ENST00000340882 KRTAP12-1P59990 96 aa5.26□□□□□ -1.57
NECTIN1-202ENST00000340882 SEC61GP60059 68 aa5.26□□□□□ -1.57
NECTIN1-202ENST00000340882 SPATA8Q6RVD6 105 aa5.25□□□□□ -1.57
NECTIN1-202ENST00000340882 A8MU10 97 aa5.23□□□□□ -1.57
NECTIN1-202ENST00000340882 KRTAP5-8O75690 187 aa5.22□□□□□ -1.57
NECTIN1-202ENST00000340882 MIR22HGQ0VDD5 57 aa5.2□□□□□ -1.58
NECTIN1-202ENST00000340882 KRTAP12-3P60328 96 aa5.13□□□□□ -1.59
NECTIN1-202ENST00000340882 KRTAP5-2Q701N4 177 aa5.13□□□□□ -1.59
NECTIN1-202ENST00000340882 TNP1P09430 55 aa5.1□□□□□ -1.59
NECTIN1-202ENST00000340882 A0A1B0GU33 70 aa5.05□□□□□ -1.6
NECTIN1-202ENST00000340882 K7ERS5 55 aa5□□□□□ -1.61
NECTIN1-202ENST00000340882 KRTAP9-9Q9BYP9 154 aa4.98□□□□□ -1.61
NECTIN1-202ENST00000340882 OBSCNQ5VST9 7968 aa4.95□□□□□ -1.62
NECTIN1-202ENST00000340882 KRTAP6-1Q3LI64 71 aa4.93□□□□□ -1.62
NECTIN1-202ENST00000340882 MT1AP04731 61 aa4.86□□□□□ -1.63
NECTIN1-202ENST00000340882 PRAC1Q96KF2 57 aa4.86□□□□□ -1.63
NECTIN1-202ENST00000340882 KRTAP6-2Q3LI66 62 aa4.81□□□□□ -1.64
NECTIN1-202ENST00000340882 ROMO1P60602 79 aa4.78□□□□□ -1.64
NECTIN1-202ENST00000340882 KRTAP9-4Q9BYQ2 154 aa4.78□□□□□ -1.64
NECTIN1-202ENST00000340882 KRTAP25-1Q3LHN0 102 aa4.77□□□□□ -1.65
NECTIN1-202ENST00000340882 KRTAP5-1Q6L8H4 278 aa4.73□□□□□ -1.65
NECTIN1-202ENST00000340882 KRTAP19-4Q3LI73 84 aa4.67□□□□□ -1.66
NECTIN1-202ENST00000340882 LCE3CQ5T5A8 94 aa4.67□□□□□ -1.66
NECTIN1-202ENST00000340882 KRTAP15-1Q3LI76 137 aa4.57□□□□□ -1.68
NECTIN1-202ENST00000340882 KRTAP9-6A8MVA2 160 aa4.52□□□□□ -1.69
NECTIN1-202ENST00000340882 MT3P25713 68 aa4.45□□□□□ -1.7
NECTIN1-202ENST00000340882 KRTAP23-1A1A580 65 aa4.3□□□□□ -1.72
NECTIN1-202ENST00000340882 LCE1EQ5T753 118 aa4.22□□□□□ -1.73
NECTIN1-202ENST00000340882 H3BS24 57 aa4.18□□□□□ -1.74
NECTIN1-202ENST00000340882 KRTAP4-2Q9BYR5 136 aa4.14□□□□□ -1.75
NECTIN1-202ENST00000340882 NDUFAF8A1L188 74 aa4.09□□□□□ -1.75
NECTIN1-202ENST00000340882 LCE1BQ5T7P3 118 aa4.09□□□□□ -1.75
NECTIN1-202ENST00000340882 LUZP6Q538Z0 58 aa4.05□□□□□ -1.76
NECTIN1-202ENST00000340882 KRTAP4-12Q9BQ66 201 aa4.01□□□□□ -1.77
NECTIN1-202ENST00000340882 LCE1CQ5T751 118 aa3.94□□□□□ -1.78
NECTIN1-202ENST00000340882 A0A0A0MQY5 61 aa3.8□□□□□ -1.8
NECTIN1-202ENST00000340882 KRTAP5-11Q6L8G4 156 aa3.76□□□□□ -1.81
NECTIN1-202ENST00000340882 PHGR1C9JFL3 82 aa3.66□□□□□ -1.82
NECTIN1-202ENST00000340882 LCE1FQ5T754 118 aa3.64□□□□□ -1.83
NECTIN1-202ENST00000340882 INE1O15225 51 aa3.51□□□□□ -1.85
NECTIN1-202ENST00000340882 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.5□□□□□ -1.85
NECTIN1-202ENST00000340882 KRTAP21-2Q3LI59 83 aa3.25□□□□□ -1.89
NECTIN1-202ENST00000340882 LCE3DQ9BYE3 92 aa3.21□□□□□ -1.9
NECTIN1-202ENST00000340882 KRTAP4-4Q9BYR3 166 aa3.12□□□□□ -1.91
NECTIN1-202ENST00000340882 MUC19Q7Z5P9 8384 aa3.09□□□□□ -1.91
NECTIN1-202ENST00000340882 LCE3EQ5T5B0 92 aa2.91□□□□□ -1.94
NECTIN1-202ENST00000340882 KRTAP21-1Q3LI58 79 aa2.75□□□□□ -1.97
NECTIN1-202ENST00000340882 PRM1P04553 51 aa2.47□□□□□ -2.01
NECTIN1-202ENST00000340882 MUC16Q8WXI7 14507 aa2.18□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 11.3 ms