RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 MT1LQ93083 61 aa5.45□□□□□ -1.54
PRKN-201ENST00000338468 HMCN1Q96RW7 5635 aa5.42□□□□□ -1.54
PRKN-201ENST00000338468 LOC100996750A0A140TA64 210 aa5.41□□□□□ -1.54
PRKN-201ENST00000338468 MIR22HGQ0VDD5 57 aa5.41□□□□□ -1.54
PRKN-201ENST00000338468 KRTAP4-6Q9BYQ5 205 aa5.41□□□□□ -1.54
PRKN-201ENST00000338468 MT1MQ8N339 61 aa5.4□□□□□ -1.54
PRKN-201ENST00000338468 MT4P47944 62 aa5.39□□□□□ -1.55
PRKN-201ENST00000338468 KRTAP19-4Q3LI73 84 aa5.38□□□□□ -1.55
PRKN-201ENST00000338468 PP632Q6XCG6 107 aa5.38□□□□□ -1.55
PRKN-201ENST00000338468 Q1T7F1 81 aa5.37□□□□□ -1.55
PRKN-201ENST00000338468 LCE4AQ5TA78 99 aa5.37□□□□□ -1.55
PRKN-201ENST00000338468 PSPHP1O15172 72 aa5.36□□□□□ -1.55
PRKN-201ENST00000338468 AHNAK2Q8IVF2 5795 aa5.36□□□□□ -1.55
PRKN-201ENST00000338468 V9GYY9 64 aa5.35□□□□□ -1.55
PRKN-201ENST00000338468 KRTAP5-10Q6L8G5 202 aa5.34□□□□□ -1.55
PRKN-201ENST00000338468 KRTAP4-3Q9BYR4 195 aa5.3□□□□□ -1.56
PRKN-201ENST00000338468 KRTAP12-3P60328 96 aa5.29□□□□□ -1.56
PRKN-201ENST00000338468 KRTAP23-1A1A580 65 aa5.28□□□□□ -1.56
PRKN-201ENST00000338468 KRTAP25-1Q3LHN0 102 aa5.25□□□□□ -1.57
PRKN-201ENST00000338468 K7ERS5 55 aa5.23□□□□□ -1.57
PRKN-201ENST00000338468 KRTAP4-7Q9BYR0 210 aa5.21□□□□□ -1.58
PRKN-201ENST00000338468 KRTAP5-7Q6L8G8 165 aa5.19□□□□□ -1.58
PRKN-201ENST00000338468 KRTAP5-4Q6L8H1 288 aa5.17□□□□□ -1.58
PRKN-201ENST00000338468 A6NED7 52 aa5.15□□□□□ -1.59
PRKN-201ENST00000338468 RPS28P62857 69 aaKnown RBP5.14□□□□□ -1.59
PRKN-201ENST00000338468 PCP4P48539 62 aa5.12□□□□□ -1.59
PRKN-201ENST00000338468 KRTAP4-12Q9BQ66 201 aa5.12□□□□□ -1.59
PRKN-201ENST00000338468 KRTAP5-3Q6L8H2 238 aa5.1□□□□□ -1.59
PRKN-201ENST00000338468 SPRR5A0A1B0GTR4 108 aa5.01□□□□□ -1.61
PRKN-201ENST00000338468 CDC42SE1Q9NRR8 79 aa5□□□□□ -1.61
PRKN-201ENST00000338468 KRTAP15-1Q3LI76 137 aa4.97□□□□□ -1.61
PRKN-201ENST00000338468 KRTAP5-5Q701N2 237 aaPredicted RBP4.97□□□□□ -1.61
PRKN-201ENST00000338468 ROMO1P60602 79 aa4.95□□□□□ -1.62
PRKN-201ENST00000338468 KRTAP20-2Q3LI61 65 aa4.93□□□□□ -1.62
PRKN-201ENST00000338468 LCE3CQ5T5A8 94 aa4.89□□□□□ -1.63
PRKN-201ENST00000338468 SYNE1Q8NF91 8797 aaKnown RBP4.79□□□□□ -1.64
PRKN-201ENST00000338468 KRTAP12-4P60329 112 aa4.79□□□□□ -1.64
PRKN-201ENST00000338468 KRTAP9-9Q9BYP9 154 aa4.77□□□□□ -1.65
PRKN-201ENST00000338468 KRTAP9-4Q9BYQ2 154 aa4.77□□□□□ -1.65
PRKN-201ENST00000338468 KRTAP9-6A8MVA2 160 aa4.67□□□□□ -1.66
PRKN-201ENST00000338468 A0A0A0MQY5 61 aa4.65□□□□□ -1.67
PRKN-201ENST00000338468 MT1AP04731 61 aa4.62□□□□□ -1.67
PRKN-201ENST00000338468 KRTAP6-1Q3LI64 71 aa4.61□□□□□ -1.67
PRKN-201ENST00000338468 KRTAP4-11Q9BYQ6 195 aa4.61□□□□□ -1.67
PRKN-201ENST00000338468 AHNAKQ09666 5890 aaKnown RBP4.58□□□□□ -1.68
PRKN-201ENST00000338468 MUC5ACP98088 5654 aa4.55□□□□□ -1.68
PRKN-201ENST00000338468 KRTAP5-2Q701N4 177 aa4.51□□□□□ -1.69
PRKN-201ENST00000338468 BRK1Q8WUW1 75 aa4.49□□□□□ -1.69
PRKN-201ENST00000338468 MUC5BQ9HC84 5762 aaPredicted RBP4.47□□□□□ -1.69
PRKN-201ENST00000338468 KRTAP5-8O75690 187 aa4.46□□□□□ -1.7
PRKN-201ENST00000338468 KRTAP6-2Q3LI66 62 aa4.38□□□□□ -1.71
PRKN-201ENST00000338468 KRTAP4-2Q9BYR5 136 aa4.22□□□□□ -1.73
PRKN-201ENST00000338468 PMAIP1Q13794 54 aa4.21□□□□□ -1.74
PRKN-201ENST00000338468 MT3P25713 68 aa4.2□□□□□ -1.74
PRKN-201ENST00000338468 OBSCNQ5VST9 7968 aa4.19□□□□□ -1.74
PRKN-201ENST00000338468 PRAC1Q96KF2 57 aa4.11□□□□□ -1.75
PRKN-201ENST00000338468 KRTAP5-1Q6L8H4 278 aa4.07□□□□□ -1.76
PRKN-201ENST00000338468 PRO0628Q9UI54 55 aa3.94□□□□□ -1.78
PRKN-201ENST00000338468 LCE1EQ5T753 118 aa3.86□□□□□ -1.79
PRKN-201ENST00000338468 KTN1-AS1Q86SY8 53 aa3.76□□□□□ -1.81
PRKN-201ENST00000338468 LCE1BQ5T7P3 118 aa3.61□□□□□ -1.83
PRKN-201ENST00000338468 NDUFAF8A1L188 74 aa3.6□□□□□ -1.83
PRKN-201ENST00000338468 LCE1CQ5T751 118 aa3.58□□□□□ -1.84
PRKN-201ENST00000338468 LCE3DQ9BYE3 92 aa3.52□□□□□ -1.85
PRKN-201ENST00000338468 LUZP6Q538Z0 58 aa3.36□□□□□ -1.87
PRKN-201ENST00000338468 LCE1FQ5T754 118 aa3.34□□□□□ -1.87
PRKN-201ENST00000338468 LCE3EQ5T5B0 92 aa3.32□□□□□ -1.88
PRKN-201ENST00000338468 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.29□□□□□ -1.88
PRKN-201ENST00000338468 KRTAP5-11Q6L8G4 156 aa3.25□□□□□ -1.89
PRKN-201ENST00000338468 PHGR1C9JFL3 82 aa3.15□□□□□ -1.91
PRKN-201ENST00000338468 KRTAP21-2Q3LI59 83 aa3.05□□□□□ -1.92
PRKN-201ENST00000338468 KRTAP4-4Q9BYR3 166 aa2.77□□□□□ -1.97
PRKN-201ENST00000338468 MUC19Q7Z5P9 8384 aa2.62□□□□□ -1.99
PRKN-201ENST00000338468 PRM1P04553 51 aa2.55□□□□□ -2
PRKN-201ENST00000338468 KRTAP21-1Q3LI58 79 aa2.4□□□□□ -2.03
PRKN-201ENST00000338468 INE1O15225 51 aa2.19□□□□□ -2.06
PRKN-201ENST00000338468 MUC16Q8WXI7 14507 aa1.9□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 1757.1 ms