RNA–Protein interactions for RNA: ENST00000328839.3

PPP4R4-202, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

TSL 1 (best) BASIC

Gene PPP4R4, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-202ENST00000328839 A8MU10 97 aa8.62□□□□□ -1.03
PPP4R4-202ENST00000328839 TNP1P09430 55 aa8.62□□□□□ -1.03
PPP4R4-202ENST00000328839 A0A1B0GU69 56 aa8.58□□□□□ -1.04
PPP4R4-202ENST00000328839 CCDC179H3BU77 68 aa8.46□□□□□ -1.06
PPP4R4-202ENST00000328839 KRTAP4-7Q9BYR0 210 aa8.45□□□□□ -1.06
PPP4R4-202ENST00000328839 KRTAP12-3P60328 96 aa8.36□□□□□ -1.07
PPP4R4-202ENST00000328839 KRTAP5-3Q6L8H2 238 aa8.36□□□□□ -1.07
PPP4R4-202ENST00000328839 KRTAP5-7Q6L8G8 165 aa8.34□□□□□ -1.07
PPP4R4-202ENST00000328839 ATP5EP56381 51 aaPredicted RBP8.31□□□□□ -1.08
PPP4R4-202ENST00000328839 KRTAP20-2Q3LI61 65 aa8.28□□□□□ -1.08
PPP4R4-202ENST00000328839 PRR15LQ9BU68 103 aa8.28□□□□□ -1.08
PPP4R4-202ENST00000328839 KRTAP5-5Q701N2 237 aaPredicted RBP8.19□□□□□ -1.1
PPP4R4-202ENST00000328839 SPRR5A0A1B0GTR4 108 aa8.17□□□□□ -1.1
PPP4R4-202ENST00000328839 LINC01558Q9Y6Z2 57 aa8.17□□□□□ -1.1
PPP4R4-202ENST00000328839 KRTAP12-4P60329 112 aa8.13□□□□□ -1.11
PPP4R4-202ENST00000328839 TMEM258P61165 79 aa8.1□□□□□ -1.11
PPP4R4-202ENST00000328839 LOC100996750A0A140TA64 210 aa8.03□□□□□ -1.12
PPP4R4-202ENST00000328839 UQCR11O14957 56 aa7.99□□□□□ -1.13
PPP4R4-202ENST00000328839 SYNE1Q8NF91 8797 aaKnown RBP7.92□□□□□ -1.14
PPP4R4-202ENST00000328839 KRTAP25-1Q3LHN0 102 aa7.9□□□□□ -1.14
PPP4R4-202ENST00000328839 MIR22HGQ0VDD5 57 aa7.83□□□□□ -1.16
PPP4R4-202ENST00000328839 KRTAP19-4Q3LI73 84 aa7.77□□□□□ -1.17
PPP4R4-202ENST00000328839 PSPHP1O15172 72 aa7.71□□□□□ -1.18
PPP4R4-202ENST00000328839 K7ERS5 55 aa7.69□□□□□ -1.18
PPP4R4-202ENST00000328839 V9GYY9 64 aa7.67□□□□□ -1.18
PPP4R4-202ENST00000328839 KRTAP15-1Q3LI76 137 aa7.66□□□□□ -1.18
PPP4R4-202ENST00000328839 KRTAP4-11Q9BYQ6 195 aa7.65□□□□□ -1.18
PPP4R4-202ENST00000328839 LCE3CQ5T5A8 94 aa7.64□□□□□ -1.19
PPP4R4-202ENST00000328839 Q1T7F1 81 aa7.6□□□□□ -1.19
PPP4R4-202ENST00000328839 KRTAP5-2Q701N4 177 aa7.55□□□□□ -1.2
PPP4R4-202ENST00000328839 MT1AP04731 61 aa7.54□□□□□ -1.2
PPP4R4-202ENST00000328839 KRTAP6-1Q3LI64 71 aa7.54□□□□□ -1.2
PPP4R4-202ENST00000328839 KRTAP23-1A1A580 65 aa7.52□□□□□ -1.21
PPP4R4-202ENST00000328839 A6NED7 52 aa7.44□□□□□ -1.22
PPP4R4-202ENST00000328839 KRTAP5-8O75690 187 aa7.4□□□□□ -1.22
PPP4R4-202ENST00000328839 KRTAP9-4Q9BYQ2 154 aa7.33□□□□□ -1.24
PPP4R4-202ENST00000328839 KRTAP6-2Q3LI66 62 aa7.29□□□□□ -1.24
PPP4R4-202ENST00000328839 CDC42SE1Q9NRR8 79 aa7.27□□□□□ -1.25
PPP4R4-202ENST00000328839 AHNAKQ09666 5890 aaKnown RBP7.25□□□□□ -1.25
PPP4R4-202ENST00000328839 MUC5ACP98088 5654 aa7.25□□□□□ -1.25
PPP4R4-202ENST00000328839 MUC5BQ9HC84 5762 aaPredicted RBP7.23□□□□□ -1.25
PPP4R4-202ENST00000328839 OBSCNQ5VST9 7968 aa7.22□□□□□ -1.25
PPP4R4-202ENST00000328839 KRTAP9-6A8MVA2 160 aa7.21□□□□□ -1.26
PPP4R4-202ENST00000328839 H3BS24 57 aa7.21□□□□□ -1.26
PPP4R4-202ENST00000328839 RPS28P62857 69 aaKnown RBP7.17□□□□□ -1.26
PPP4R4-202ENST00000328839 ROMO1P60602 79 aa7.15□□□□□ -1.26
PPP4R4-202ENST00000328839 KRTAP9-9Q9BYP9 154 aa7.12□□□□□ -1.27
PPP4R4-202ENST00000328839 PCP4P48539 62 aa7.1□□□□□ -1.27
PPP4R4-202ENST00000328839 MT3P25713 68 aa6.92□□□□□ -1.3
PPP4R4-202ENST00000328839 KRTAP5-1Q6L8H4 278 aa6.86□□□□□ -1.31
PPP4R4-202ENST00000328839 LCE1EQ5T753 118 aa6.4□□□□□ -1.38
PPP4R4-202ENST00000328839 BRK1Q8WUW1 75 aa6.38□□□□□ -1.39
PPP4R4-202ENST00000328839 KRTAP4-12Q9BQ66 201 aa6.23□□□□□ -1.41
PPP4R4-202ENST00000328839 LCE1BQ5T7P3 118 aa6.17□□□□□ -1.42
PPP4R4-202ENST00000328839 KRTAP4-2Q9BYR5 136 aa6.11□□□□□ -1.43
PPP4R4-202ENST00000328839 PMAIP1Q13794 54 aa5.97□□□□□ -1.45
PPP4R4-202ENST00000328839 LCE1CQ5T751 118 aa5.95□□□□□ -1.46
PPP4R4-202ENST00000328839 PRAC1Q96KF2 57 aa5.81□□□□□ -1.48
PPP4R4-202ENST00000328839 SVIPQ8NHG7 77 aa5.79□□□□□ -1.48
PPP4R4-202ENST00000328839 KRTAP5-11Q6L8G4 156 aa5.44□□□□□ -1.54
PPP4R4-202ENST00000328839 LCE3DQ9BYE3 92 aa5.44□□□□□ -1.54
PPP4R4-202ENST00000328839 PRO0628Q9UI54 55 aa5.43□□□□□ -1.54
PPP4R4-202ENST00000328839 LCE1FQ5T754 118 aa5.36□□□□□ -1.55
PPP4R4-202ENST00000328839 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.34□□□□□ -1.55
PPP4R4-202ENST00000328839 KTN1-AS1Q86SY8 53 aa5.23□□□□□ -1.57
PPP4R4-202ENST00000328839 PHGR1C9JFL3 82 aa5.09□□□□□ -1.59
PPP4R4-202ENST00000328839 A0A0A0MQY5 61 aa5.04□□□□□ -1.6
PPP4R4-202ENST00000328839 LCE3EQ5T5B0 92 aa5.04□□□□□ -1.6
PPP4R4-202ENST00000328839 KRTAP21-2Q3LI59 83 aa4.94□□□□□ -1.62
PPP4R4-202ENST00000328839 LUZP6Q538Z0 58 aa4.9□□□□□ -1.63
PPP4R4-202ENST00000328839 KRTAP4-4Q9BYR3 166 aa4.66□□□□□ -1.66
PPP4R4-202ENST00000328839 MUC19Q7Z5P9 8384 aa4.47□□□□□ -1.69
PPP4R4-202ENST00000328839 NDUFAF8A1L188 74 aa4.03□□□□□ -1.76
PPP4R4-202ENST00000328839 KRTAP21-1Q3LI58 79 aa3.84□□□□□ -1.79
PPP4R4-202ENST00000328839 PRM1P04553 51 aa3.68□□□□□ -1.82
PPP4R4-202ENST00000328839 MUC16Q8WXI7 14507 aa3.13□□□□□ -1.91
PPP4R4-202ENST00000328839 INE1O15225 51 aa3.02□□□□□ -1.93
Retrieved 77 of 20,778 RNA–protein pairs in 11.2 ms