RNA–Protein interactions for RNA: ENST00000322310.9

SSNA1-201, Transcript of SS nuclear autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSNA1, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-201ENST00000322310 KRTAP4-7Q9BYR0 210 aa6.59□□□□□ -1.35
SSNA1-201ENST00000322310 SPINT4Q6UDR6 99 aa6.58□□□□□ -1.36
SSNA1-201ENST00000322310 SERP1Q9Y6X1 66 aa6.57□□□□□ -1.36
SSNA1-201ENST00000322310 LCE3AQ5TA76 89 aa6.55□□□□□ -1.36
SSNA1-201ENST00000322310 SPATA8Q6RVD6 105 aa6.5□□□□□ -1.37
SSNA1-201ENST00000322310 KRTAP5-5Q701N2 237 aaPredicted RBP6.5□□□□□ -1.37
SSNA1-201ENST00000322310 KRTAP12-1P59990 96 aa6.48□□□□□ -1.37
SSNA1-201ENST00000322310 KRTAP12-4P60329 112 aa6.46□□□□□ -1.38
SSNA1-201ENST00000322310 SMIM26A0A096LP01 95 aa6.4□□□□□ -1.38
SSNA1-201ENST00000322310 COA5Q86WW8 74 aa6.4□□□□□ -1.38
SSNA1-201ENST00000322310 V9GYY9 64 aa6.34□□□□□ -1.39
SSNA1-201ENST00000322310 SYNE1Q8NF91 8797 aaKnown RBP6.33□□□□□ -1.4
SSNA1-201ENST00000322310 TNP1P09430 55 aa6.31□□□□□ -1.4
SSNA1-201ENST00000322310 SEC61GP60059 68 aa6.3□□□□□ -1.4
SSNA1-201ENST00000322310 A0A1B0GU33 70 aa6.29□□□□□ -1.4
SSNA1-201ENST00000322310 KRTAP4-11Q9BYQ6 195 aa6.28□□□□□ -1.4
SSNA1-201ENST00000322310 LOC100996750A0A140TA64 210 aa6.27□□□□□ -1.41
SSNA1-201ENST00000322310 KRTAP12-3P60328 96 aa6.27□□□□□ -1.41
SSNA1-201ENST00000322310 Q1T7F1 81 aa6.23□□□□□ -1.41
SSNA1-201ENST00000322310 AHNAKQ09666 5890 aaKnown RBP6.2□□□□□ -1.42
SSNA1-201ENST00000322310 MUC5ACP98088 5654 aa6.2□□□□□ -1.42
SSNA1-201ENST00000322310 LINC01558Q9Y6Z2 57 aa6.16□□□□□ -1.42
SSNA1-201ENST00000322310 A8MU10 97 aa6.14□□□□□ -1.43
SSNA1-201ENST00000322310 PRR15LQ9BU68 103 aa6.14□□□□□ -1.43
SSNA1-201ENST00000322310 PSPHP1O15172 72 aa6.12□□□□□ -1.43
SSNA1-201ENST00000322310 MUC5BQ9HC84 5762 aaPredicted RBP6.12□□□□□ -1.43
SSNA1-201ENST00000322310 KRTAP5-8O75690 187 aa6.11□□□□□ -1.43
SSNA1-201ENST00000322310 A0A1B0GU69 56 aa6.08□□□□□ -1.44
SSNA1-201ENST00000322310 KRTAP5-2Q701N4 177 aa6.07□□□□□ -1.44
SSNA1-201ENST00000322310 A6NED7 52 aa5.98□□□□□ -1.45
SSNA1-201ENST00000322310 BRK1Q8WUW1 75 aa5.95□□□□□ -1.46
SSNA1-201ENST00000322310 PRO0628Q9UI54 55 aa5.91□□□□□ -1.46
SSNA1-201ENST00000322310 UQCR11O14957 56 aa5.9□□□□□ -1.46
SSNA1-201ENST00000322310 KRTAP6-1Q3LI64 71 aa5.89□□□□□ -1.47
SSNA1-201ENST00000322310 KRTAP9-9Q9BYP9 154 aa5.87□□□□□ -1.47
SSNA1-201ENST00000322310 OBSCNQ5VST9 7968 aa5.87□□□□□ -1.47
SSNA1-201ENST00000322310 CDC42SE1Q9NRR8 79 aa5.86□□□□□ -1.47
SSNA1-201ENST00000322310 MT1AP04731 61 aa5.84□□□□□ -1.47
SSNA1-201ENST00000322310 MIR22HGQ0VDD5 57 aa5.84□□□□□ -1.47
SSNA1-201ENST00000322310 KRTAP6-2Q3LI66 62 aa5.75□□□□□ -1.49
SSNA1-201ENST00000322310 KRTAP19-4Q3LI73 84 aa5.75□□□□□ -1.49
SSNA1-201ENST00000322310 SVIPQ8NHG7 77 aa5.72□□□□□ -1.49
SSNA1-201ENST00000322310 KRTAP9-4Q9BYQ2 154 aa5.71□□□□□ -1.5
SSNA1-201ENST00000322310 LCE3CQ5T5A8 94 aa5.7□□□□□ -1.5
SSNA1-201ENST00000322310 KRTAP25-1Q3LHN0 102 aa5.68□□□□□ -1.5
SSNA1-201ENST00000322310 K7ERS5 55 aa5.64□□□□□ -1.51
SSNA1-201ENST00000322310 KRTAP15-1Q3LI76 137 aa5.62□□□□□ -1.51
SSNA1-201ENST00000322310 PMAIP1Q13794 54 aa5.61□□□□□ -1.51
SSNA1-201ENST00000322310 KRTAP5-1Q6L8H4 278 aa5.57□□□□□ -1.52
SSNA1-201ENST00000322310 KRTAP9-6A8MVA2 160 aa5.46□□□□□ -1.54
SSNA1-201ENST00000322310 KTN1-AS1Q86SY8 53 aa5.44□□□□□ -1.54
SSNA1-201ENST00000322310 MT3P25713 68 aa5.36□□□□□ -1.55
SSNA1-201ENST00000322310 ROMO1P60602 79 aa5.34□□□□□ -1.55
SSNA1-201ENST00000322310 KRTAP23-1A1A580 65 aa5.32□□□□□ -1.56
SSNA1-201ENST00000322310 PRAC1Q96KF2 57 aa5.22□□□□□ -1.57
SSNA1-201ENST00000322310 LCE1EQ5T753 118 aa5.06□□□□□ -1.6
SSNA1-201ENST00000322310 KRTAP4-2Q9BYR5 136 aa4.89□□□□□ -1.63
SSNA1-201ENST00000322310 LCE1BQ5T7P3 118 aa4.88□□□□□ -1.63
SSNA1-201ENST00000322310 KRTAP4-12Q9BQ66 201 aa4.71□□□□□ -1.66
SSNA1-201ENST00000322310 LCE1CQ5T751 118 aa4.7□□□□□ -1.66
SSNA1-201ENST00000322310 KRTAP5-11Q6L8G4 156 aa4.42□□□□□ -1.7
SSNA1-201ENST00000322310 LUZP6Q538Z0 58 aa4.39□□□□□ -1.71
SSNA1-201ENST00000322310 LCE1FQ5T754 118 aa4.32□□□□□ -1.72
SSNA1-201ENST00000322310 PHGR1C9JFL3 82 aa4.28□□□□□ -1.72
SSNA1-201ENST00000322310 NDUFAF8A1L188 74 aa4.21□□□□□ -1.74
SSNA1-201ENST00000322310 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.19□□□□□ -1.74
SSNA1-201ENST00000322310 LCE3DQ9BYE3 92 aa3.97□□□□□ -1.77
SSNA1-201ENST00000322310 A0A0A0MQY5 61 aa3.91□□□□□ -1.78
SSNA1-201ENST00000322310 KRTAP21-2Q3LI59 83 aa3.88□□□□□ -1.79
SSNA1-201ENST00000322310 H3BS24 57 aa3.84□□□□□ -1.79
SSNA1-201ENST00000322310 KRTAP4-4Q9BYR3 166 aa3.7□□□□□ -1.82
SSNA1-201ENST00000322310 INE1O15225 51 aa3.67□□□□□ -1.82
SSNA1-201ENST00000322310 MUC19Q7Z5P9 8384 aa3.67□□□□□ -1.82
SSNA1-201ENST00000322310 LCE3EQ5T5B0 92 aa3.62□□□□□ -1.83
SSNA1-201ENST00000322310 KRTAP21-1Q3LI58 79 aa3.23□□□□□ -1.89
SSNA1-201ENST00000322310 PRM1P04553 51 aa2.78□□□□□ -1.96
SSNA1-201ENST00000322310 MUC16Q8WXI7 14507 aa2.55□□□□□ -2
Retrieved 77 of 20,778 RNA–protein pairs in 77 ms