RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 SPATA8Q6RVD6 105 aa1.43□□□□□ -2.18
SCAMP1-201ENST00000320280 MT1BP07438 61 aa1.43□□□□□ -2.18
SCAMP1-201ENST00000320280 K7ERS5 55 aa1.42□□□□□ -2.18
SCAMP1-201ENST00000320280 MIR22HGQ0VDD5 57 aa1.41□□□□□ -2.18
SCAMP1-201ENST00000320280 CDC42SE1Q9NRR8 79 aa1.41□□□□□ -2.18
SCAMP1-201ENST00000320280 CRCT1Q9UGL9 99 aa1.41□□□□□ -2.18
SCAMP1-201ENST00000320280 KTN1-AS1Q86SY8 53 aa1.39□□□□□ -2.19
SCAMP1-201ENST00000320280 KRTAP13-4Q3LI77 160 aa1.38□□□□□ -2.19
SCAMP1-201ENST00000320280 KRTAP12-1P59990 96 aa1.38□□□□□ -2.19
SCAMP1-201ENST00000320280 A6NED7 52 aa1.37□□□□□ -2.19
SCAMP1-201ENST00000320280 KRTAP4-3Q9BYR4 195 aa1.37□□□□□ -2.19
SCAMP1-201ENST00000320280 MT1XP80297 61 aa1.36□□□□□ -2.19
SCAMP1-201ENST00000320280 PSPHP1O15172 72 aa1.36□□□□□ -2.19
SCAMP1-201ENST00000320280 CAMK2N1Q7Z7J9 78 aa1.36□□□□□ -2.19
SCAMP1-201ENST00000320280 KRTAP25-1Q3LHN0 102 aa1.35□□□□□ -2.19
SCAMP1-201ENST00000320280 C10orf95Q9H7T3 257 aa1.35□□□□□ -2.19
SCAMP1-201ENST00000320280 TNP1P09430 55 aa1.34□□□□□ -2.19
SCAMP1-201ENST00000320280 LINC01554Q52M75 96 aa1.34□□□□□ -2.19
SCAMP1-201ENST00000320280 NEBP20929 6669 aa1.34□□□□□ -2.2
SCAMP1-201ENST00000320280 SPINT4Q6UDR6 99 aa1.33□□□□□ -2.2
SCAMP1-201ENST00000320280 PP632Q6XCG6 107 aa1.33□□□□□ -2.2
SCAMP1-201ENST00000320280 FCGBPQ9Y6R7 5405 aaPredicted RBP1.32□□□□□ -2.2
SCAMP1-201ENST00000320280 A0A0D9SG42 100 aa1.32□□□□□ -2.2
SCAMP1-201ENST00000320280 KRTAP6-3Q3LI67 103 aa1.32□□□□□ -2.2
SCAMP1-201ENST00000320280 A8MU10 97 aa1.31□□□□□ -2.2
SCAMP1-201ENST00000320280 ROMO1P60602 79 aa1.31□□□□□ -2.2
SCAMP1-201ENST00000320280 KRTAP5-8O75690 187 aa1.29□□□□□ -2.2
SCAMP1-201ENST00000320280 KRTAP8-1Q8IUC2 63 aa1.27□□□□□ -2.21
SCAMP1-201ENST00000320280 MUC19Q7Z5P9 8384 aa1.26□□□□□ -2.21
SCAMP1-201ENST00000320280 MACF1Q9UPN3 7388 aaKnown RBP1.26□□□□□ -2.21
SCAMP1-201ENST00000320280 KMT2DO14686 5537 aa1.25□□□□□ -2.21
SCAMP1-201ENST00000320280 MUC12Q9UKN1 5478 aa1.22□□□□□ -2.21
SCAMP1-201ENST00000320280 MT1EP04732 61 aa1.22□□□□□ -2.21
SCAMP1-201ENST00000320280 KRTAP19-7Q3SYF9 63 aa1.21□□□□□ -2.22
SCAMP1-201ENST00000320280 MT1GP13640 62 aa1.21□□□□□ -2.22
SCAMP1-201ENST00000320280 KRTAP12-3P60328 96 aa1.21□□□□□ -2.22
SCAMP1-201ENST00000320280 KRTAP5-2Q701N4 177 aa1.2□□□□□ -2.22
SCAMP1-201ENST00000320280 KRTAP19-3Q7Z4W3 81 aa1.2□□□□□ -2.22
SCAMP1-201ENST00000320280 SPRR2FQ96RM1 72 aa1.2□□□□□ -2.22
SCAMP1-201ENST00000320280 LCE3DQ9BYE3 92 aa1.2□□□□□ -2.22
SCAMP1-201ENST00000320280 KRTAP19-5Q3LI72 72 aa1.19□□□□□ -2.22
SCAMP1-201ENST00000320280 SYNE2Q8WXH0 6885 aaKnown RBP1.19□□□□□ -2.22
SCAMP1-201ENST00000320280 GPR98Q8WXG9 6306 aa1.18□□□□□ -2.22
SCAMP1-201ENST00000320280 SPRR2EP22531 72 aa1.18□□□□□ -2.22
SCAMP1-201ENST00000320280 SPRR2BP35325 72 aa1.18□□□□□ -2.22
SCAMP1-201ENST00000320280 SPRR2AP35326 72 aa1.18□□□□□ -2.22
SCAMP1-201ENST00000320280 MT1LQ93083 61 aa1.18□□□□□ -2.22
SCAMP1-201ENST00000320280 KRTAP2-3P0C7H8 128 aa1.17□□□□□ -2.22
SCAMP1-201ENST00000320280 KRTAP2-4Q9BYR9 128 aa1.17□□□□□ -2.22
SCAMP1-201ENST00000320280 LUZP6Q538Z0 58 aa1.16□□□□□ -2.22
SCAMP1-201ENST00000320280 KRTAP5-7Q6L8G8 165 aa1.15□□□□□ -2.23
SCAMP1-201ENST00000320280 SPRR2DP22532 72 aa1.15□□□□□ -2.23
SCAMP1-201ENST00000320280 KRTAP5-10Q6L8G5 202 aa1.15□□□□□ -2.23
SCAMP1-201ENST00000320280 AHNAK2Q8IVF2 5795 aa1.15□□□□□ -2.23
SCAMP1-201ENST00000320280 MT1MQ8N339 61 aa1.14□□□□□ -2.23
SCAMP1-201ENST00000320280 KRTAP20-1Q3LI63 56 aa1.14□□□□□ -2.23
SCAMP1-201ENST00000320280 KRTAP2-1Q9BYU5 128 aa1.13□□□□□ -2.23
SCAMP1-201ENST00000320280 MDN1Q9NU22 5596 aa1.12□□□□□ -2.23
SCAMP1-201ENST00000320280 FSIP2Q5CZC0 6907 aa1.11□□□□□ -2.23
SCAMP1-201ENST00000320280 LCE1CQ5T751 118 aa1.11□□□□□ -2.23
SCAMP1-201ENST00000320280 LCE1BQ5T7P3 118 aa1.11□□□□□ -2.23
SCAMP1-201ENST00000320280 SPRR5A0A1B0GTR4 108 aa1.11□□□□□ -2.23
SCAMP1-201ENST00000320280 AHNAKQ09666 5890 aaKnown RBP1.09□□□□□ -2.23
SCAMP1-201ENST00000320280 MT1AP04731 61 aa1.04□□□□□ -2.24
SCAMP1-201ENST00000320280 KRTAP12-4P60329 112 aa1.02□□□□□ -2.25
SCAMP1-201ENST00000320280 KRTAP20-2Q3LI61 65 aa0.97□□□□□ -2.25
SCAMP1-201ENST00000320280 MUC5ACP98088 5654 aa0.97□□□□□ -2.25
SCAMP1-201ENST00000320280 KRTAP6-1Q3LI64 71 aa0.95□□□□□ -2.26
SCAMP1-201ENST00000320280 INE1O15225 51 aa0.95□□□□□ -2.26
SCAMP1-201ENST00000320280 MT4P47944 62 aa0.92□□□□□ -2.26
SCAMP1-201ENST00000320280 KRTAP6-2Q3LI66 62 aa0.88□□□□□ -2.27
SCAMP1-201ENST00000320280 SYNE1Q8NF91 8797 aaKnown RBP0.83□□□□□ -2.28
SCAMP1-201ENST00000320280 KRTAP21-2Q3LI59 83 aa0.83□□□□□ -2.28
SCAMP1-201ENST00000320280 DSTQ03001 7570 aaKnown RBP0.81□□□□□ -2.28
SCAMP1-201ENST00000320280 PRM1P04553 51 aa0.62□□□□□ -2.31
SCAMP1-201ENST00000320280 PHGR1C9JFL3 82 aa0.6□□□□□ -2.31
SCAMP1-201ENST00000320280 MUC16Q8WXI7 14507 aa0.55□□□□□ -2.32
SCAMP1-201ENST00000320280 KRTAP21-1Q3LI58 79 aa0.43□□□□□ -2.34
Retrieved 78 of 20,778 RNA–protein pairs in 12.1 ms