RNA–Protein interactions for RNA: ENST00000315713.5

ABCD3-201, Transcript of ATP binding cassette subfamily D member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCD3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-201ENST00000315713 KRTAP10-12P60413 245 aa4.8□□□□□ -1.64
ABCD3-201ENST00000315713 KRTAP12-1P59990 96 aa4.79□□□□□ -1.64
ABCD3-201ENST00000315713 A8MU10 97 aa4.78□□□□□ -1.64
ABCD3-201ENST00000315713 Q1T7F1 81 aa4.75□□□□□ -1.65
ABCD3-201ENST00000315713 GPR98Q8WXG9 6306 aa4.71□□□□□ -1.65
ABCD3-201ENST00000315713 UQCR11O14957 56 aa4.7□□□□□ -1.66
ABCD3-201ENST00000315713 A0A0A0MQY5 61 aa4.68□□□□□ -1.66
ABCD3-201ENST00000315713 PSPHP1O15172 72 aa4.66□□□□□ -1.66
ABCD3-201ENST00000315713 DSTQ03001 7570 aaKnown RBP4.62□□□□□ -1.67
ABCD3-201ENST00000315713 MIR22HGQ0VDD5 57 aa4.61□□□□□ -1.67
ABCD3-201ENST00000315713 A6NED7 52 aa4.6□□□□□ -1.67
ABCD3-201ENST00000315713 C10orf95Q9H7T3 257 aa4.57□□□□□ -1.68
ABCD3-201ENST00000315713 TNP1P09430 55 aa4.56□□□□□ -1.68
ABCD3-201ENST00000315713 K7ERS5 55 aa4.53□□□□□ -1.68
ABCD3-201ENST00000315713 KRTAP23-1A1A580 65 aa4.51□□□□□ -1.69
ABCD3-201ENST00000315713 KRTAP19-7Q3SYF9 63 aa4.51□□□□□ -1.69
ABCD3-201ENST00000315713 BRK1Q8WUW1 75 aa4.49□□□□□ -1.69
ABCD3-201ENST00000315713 MT1EP04732 61 aa4.47□□□□□ -1.69
ABCD3-201ENST00000315713 CDC42SE1Q9NRR8 79 aa4.47□□□□□ -1.69
ABCD3-201ENST00000315713 KRTAP19-5Q3LI72 72 aa4.46□□□□□ -1.7
ABCD3-201ENST00000315713 LCE3AQ5TA76 89 aa4.45□□□□□ -1.7
ABCD3-201ENST00000315713 KRTAP19-3Q7Z4W3 81 aa4.45□□□□□ -1.7
ABCD3-201ENST00000315713 KRTAP15-1Q3LI76 137 aa4.44□□□□□ -1.7
ABCD3-201ENST00000315713 HMCN1Q96RW7 5635 aa4.38□□□□□ -1.71
ABCD3-201ENST00000315713 MT4P47944 62 aa4.37□□□□□ -1.71
ABCD3-201ENST00000315713 KRTAP25-1Q3LHN0 102 aa4.37□□□□□ -1.71
ABCD3-201ENST00000315713 PRO0628Q9UI54 55 aa4.37□□□□□ -1.71
ABCD3-201ENST00000315713 AHNAK2Q8IVF2 5795 aa4.35□□□□□ -1.71
ABCD3-201ENST00000315713 MT1GP13640 62 aa4.32□□□□□ -1.72
ABCD3-201ENST00000315713 PP632Q6XCG6 107 aa4.31□□□□□ -1.72
ABCD3-201ENST00000315713 MT1LQ93083 61 aa4.3□□□□□ -1.72
ABCD3-201ENST00000315713 KRTAP12-3P60328 96 aa4.28□□□□□ -1.72
ABCD3-201ENST00000315713 KRTAP5-10Q6L8G5 202 aa4.28□□□□□ -1.72
ABCD3-201ENST00000315713 PMAIP1Q13794 54 aa4.25□□□□□ -1.73
ABCD3-201ENST00000315713 MT1MQ8N339 61 aa4.25□□□□□ -1.73
ABCD3-201ENST00000315713 ROMO1P60602 79 aa4.22□□□□□ -1.73
ABCD3-201ENST00000315713 KRTAP5-4Q6L8H1 288 aa4.21□□□□□ -1.74
ABCD3-201ENST00000315713 KRTAP4-3Q9BYR4 195 aa4.18□□□□□ -1.74
ABCD3-201ENST00000315713 KRTAP5-7Q6L8G8 165 aa4.14□□□□□ -1.75
ABCD3-201ENST00000315713 KTN1-AS1Q86SY8 53 aa4.07□□□□□ -1.76
ABCD3-201ENST00000315713 KRTAP20-2Q3LI61 65 aa4.01□□□□□ -1.77
ABCD3-201ENST00000315713 SPRR5A0A1B0GTR4 108 aa3.98□□□□□ -1.77
ABCD3-201ENST00000315713 LCE3CQ5T5A8 94 aa3.96□□□□□ -1.78
ABCD3-201ENST00000315713 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.96□□□□□ -1.78
ABCD3-201ENST00000315713 KRTAP5-5Q701N2 237 aaPredicted RBP3.92□□□□□ -1.78
ABCD3-201ENST00000315713 PRAC1Q96KF2 57 aa3.89□□□□□ -1.79
ABCD3-201ENST00000315713 KRTAP12-4P60329 112 aa3.85□□□□□ -1.79
ABCD3-201ENST00000315713 KRTAP5-11Q6L8G4 156 aa3.85□□□□□ -1.79
ABCD3-201ENST00000315713 SYNE1Q8NF91 8797 aaKnown RBP3.8□□□□□ -1.8
ABCD3-201ENST00000315713 KRTAP9-6A8MVA2 160 aa3.7□□□□□ -1.82
ABCD3-201ENST00000315713 MT1AP04731 61 aa3.67□□□□□ -1.82
ABCD3-201ENST00000315713 KRTAP5-2Q701N4 177 aa3.65□□□□□ -1.83
ABCD3-201ENST00000315713 KRTAP6-1Q3LI64 71 aa3.63□□□□□ -1.83
ABCD3-201ENST00000315713 KRTAP5-8O75690 187 aa3.61□□□□□ -1.83
ABCD3-201ENST00000315713 MUC5ACP98088 5654 aa3.61□□□□□ -1.83
ABCD3-201ENST00000315713 LCE1EQ5T753 118 aa3.6□□□□□ -1.83
ABCD3-201ENST00000315713 AHNAKQ09666 5890 aaKnown RBP3.6□□□□□ -1.83
ABCD3-201ENST00000315713 MUC5BQ9HC84 5762 aaPredicted RBP3.57□□□□□ -1.84
ABCD3-201ENST00000315713 NDUFAF8A1L188 74 aa3.47□□□□□ -1.85
ABCD3-201ENST00000315713 KRTAP6-2Q3LI66 62 aa3.46□□□□□ -1.86
ABCD3-201ENST00000315713 OBSCNQ5VST9 7968 aa3.46□□□□□ -1.86
ABCD3-201ENST00000315713 KRTAP5-1Q6L8H4 278 aa3.41□□□□□ -1.86
ABCD3-201ENST00000315713 LUZP6Q538Z0 58 aa3.4□□□□□ -1.87
ABCD3-201ENST00000315713 MT3P25713 68 aa3.36□□□□□ -1.87
ABCD3-201ENST00000315713 KRTAP4-4Q9BYR3 166 aa3.29□□□□□ -1.88
ABCD3-201ENST00000315713 LCE1FQ5T754 118 aa3.01□□□□□ -1.93
ABCD3-201ENST00000315713 LCE1BQ5T7P3 118 aa2.93□□□□□ -1.94
ABCD3-201ENST00000315713 LCE3DQ9BYE3 92 aa2.89□□□□□ -1.95
ABCD3-201ENST00000315713 LCE1CQ5T751 118 aa2.82□□□□□ -1.96
ABCD3-201ENST00000315713 LCE3EQ5T5B0 92 aa2.75□□□□□ -1.97
ABCD3-201ENST00000315713 INE1O15225 51 aa2.68□□□□□ -1.98
ABCD3-201ENST00000315713 PHGR1C9JFL3 82 aa2.51□□□□□ -2.01
ABCD3-201ENST00000315713 KRTAP21-2Q3LI59 83 aa2.38□□□□□ -2.03
ABCD3-201ENST00000315713 PRM1P04553 51 aa2.17□□□□□ -2.06
ABCD3-201ENST00000315713 MUC19Q7Z5P9 8384 aa2.15□□□□□ -2.07
ABCD3-201ENST00000315713 KRTAP21-1Q3LI58 79 aa1.89□□□□□ -2.11
ABCD3-201ENST00000315713 MUC16Q8WXI7 14507 aa1.6□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 73.3 ms