RNA–Protein interactions for RNA: ENST00000309246.9

TPT1-201, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 1 (best) BASIC

Gene TPT1, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-201ENST00000309246 KRTAP2-1Q9BYU5 128 aa5.04□□□□□ -1.6
TPT1-201ENST00000309246 KRTAP12-2P59991 146 aa5.02□□□□□ -1.61
TPT1-201ENST00000309246 MIR22HGQ0VDD5 57 aa5.02□□□□□ -1.61
TPT1-201ENST00000309246 SPRR2DP22532 72 aa5□□□□□ -1.61
TPT1-201ENST00000309246 R4GN34 69 aa4.99□□□□□ -1.61
TPT1-201ENST00000309246 P0C880 135 aa4.97□□□□□ -1.61
TPT1-201ENST00000309246 M0QZ58 72 aa4.95□□□□□ -1.62
TPT1-201ENST00000309246 MT3P25713 68 aa4.92□□□□□ -1.62
TPT1-201ENST00000309246 LINC01554Q52M75 96 aa4.91□□□□□ -1.62
TPT1-201ENST00000309246 KRTAP10-7P60409 375 aaPredicted RBP4.9□□□□□ -1.63
TPT1-201ENST00000309246 GPR98Q8WXG9 6306 aa4.89□□□□□ -1.63
TPT1-201ENST00000309246 A0A1B0GU33 70 aa4.88□□□□□ -1.63
TPT1-201ENST00000309246 KRTAP10-12P60413 245 aa4.85□□□□□ -1.63
TPT1-201ENST00000309246 A0A0D9SG42 100 aa4.78□□□□□ -1.64
TPT1-201ENST00000309246 K7ERS5 55 aa4.78□□□□□ -1.64
TPT1-201ENST00000309246 KRTAP13-4Q3LI77 160 aa4.76□□□□□ -1.65
TPT1-201ENST00000309246 PRAC1Q96KF2 57 aa4.75□□□□□ -1.65
TPT1-201ENST00000309246 SPINT4Q6UDR6 99 aa4.66□□□□□ -1.66
TPT1-201ENST00000309246 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.65□□□□□ -1.67
TPT1-201ENST00000309246 KRTAP25-1Q3LHN0 102 aa4.63□□□□□ -1.67
TPT1-201ENST00000309246 ROMO1P60602 79 aa4.61□□□□□ -1.67
TPT1-201ENST00000309246 KRTAP12-1P59990 96 aa4.58□□□□□ -1.68
TPT1-201ENST00000309246 KRTAP19-7Q3SYF9 63 aa4.58□□□□□ -1.68
TPT1-201ENST00000309246 DSTQ03001 7570 aaKnown RBP4.57□□□□□ -1.68
TPT1-201ENST00000309246 MT1EP04732 61 aa4.56□□□□□ -1.68
TPT1-201ENST00000309246 KRTAP19-3Q7Z4W3 81 aa4.56□□□□□ -1.68
TPT1-201ENST00000309246 CAMK2N1Q7Z7J9 78 aa4.56□□□□□ -1.68
TPT1-201ENST00000309246 KRTAP5-11Q6L8G4 156 aa4.55□□□□□ -1.68
TPT1-201ENST00000309246 LCE1EQ5T753 118 aa4.5□□□□□ -1.69
TPT1-201ENST00000309246 KRTAP19-5Q3LI72 72 aa4.42□□□□□ -1.7
TPT1-201ENST00000309246 MT1GP13640 62 aa4.41□□□□□ -1.7
TPT1-201ENST00000309246 MT4P47944 62 aa4.4□□□□□ -1.71
TPT1-201ENST00000309246 PP632Q6XCG6 107 aa4.38□□□□□ -1.71
TPT1-201ENST00000309246 MT1MQ8N339 61 aa4.36□□□□□ -1.71
TPT1-201ENST00000309246 MT1LQ93083 61 aa4.32□□□□□ -1.72
TPT1-201ENST00000309246 C10orf95Q9H7T3 257 aa4.32□□□□□ -1.72
TPT1-201ENST00000309246 HMCN1Q96RW7 5635 aa4.29□□□□□ -1.72
TPT1-201ENST00000309246 NDUFAF8A1L188 74 aa4.29□□□□□ -1.72
TPT1-201ENST00000309246 KRTAP4-3Q9BYR4 195 aa4.29□□□□□ -1.72
TPT1-201ENST00000309246 KRTAP5-4Q6L8H1 288 aa4.27□□□□□ -1.73
TPT1-201ENST00000309246 AHNAK2Q8IVF2 5795 aa4.26□□□□□ -1.73
TPT1-201ENST00000309246 TNP1P09430 55 aa4.26□□□□□ -1.73
TPT1-201ENST00000309246 LCE1FQ5T754 118 aa4.26□□□□□ -1.73
TPT1-201ENST00000309246 KRTAP5-10Q6L8G5 202 aa4.26□□□□□ -1.73
TPT1-201ENST00000309246 LCE3AQ5TA76 89 aa4.21□□□□□ -1.74
TPT1-201ENST00000309246 KRTAP5-7Q6L8G8 165 aa4.12□□□□□ -1.75
TPT1-201ENST00000309246 KRTAP20-2Q3LI61 65 aa4.05□□□□□ -1.76
TPT1-201ENST00000309246 KRTAP5-1Q6L8H4 278 aa4.04□□□□□ -1.76
TPT1-201ENST00000309246 KRTAP12-3P60328 96 aa4.03□□□□□ -1.76
TPT1-201ENST00000309246 LCE3CQ5T5A8 94 aa4.01□□□□□ -1.77
TPT1-201ENST00000309246 KRTAP5-5Q701N2 237 aaPredicted RBP4□□□□□ -1.77
TPT1-201ENST00000309246 SPRR5A0A1B0GTR4 108 aa3.99□□□□□ -1.77
TPT1-201ENST00000309246 KRTAP9-6A8MVA2 160 aa3.97□□□□□ -1.77
TPT1-201ENST00000309246 KRTAP12-4P60329 112 aa3.94□□□□□ -1.78
TPT1-201ENST00000309246 KRTAP4-4Q9BYR3 166 aa3.91□□□□□ -1.78
TPT1-201ENST00000309246 LUZP6Q538Z0 58 aa3.89□□□□□ -1.79
TPT1-201ENST00000309246 SYNE1Q8NF91 8797 aaKnown RBP3.85□□□□□ -1.79
TPT1-201ENST00000309246 AHNAKQ09666 5890 aaKnown RBP3.71□□□□□ -1.82
TPT1-201ENST00000309246 KRTAP5-2Q701N4 177 aa3.7□□□□□ -1.82
TPT1-201ENST00000309246 MT1AP04731 61 aa3.67□□□□□ -1.82
TPT1-201ENST00000309246 KRTAP6-1Q3LI64 71 aa3.67□□□□□ -1.82
TPT1-201ENST00000309246 LCE3EQ5T5B0 92 aa3.64□□□□□ -1.83
TPT1-201ENST00000309246 KRTAP5-8O75690 187 aa3.63□□□□□ -1.83
TPT1-201ENST00000309246 OBSCNQ5VST9 7968 aa3.62□□□□□ -1.83
TPT1-201ENST00000309246 MUC5ACP98088 5654 aa3.56□□□□□ -1.84
TPT1-201ENST00000309246 KRTAP6-2Q3LI66 62 aa3.55□□□□□ -1.84
TPT1-201ENST00000309246 MUC5BQ9HC84 5762 aaPredicted RBP3.52□□□□□ -1.85
TPT1-201ENST00000309246 INE1O15225 51 aa3.41□□□□□ -1.86
TPT1-201ENST00000309246 LCE1BQ5T7P3 118 aa3□□□□□ -1.93
TPT1-201ENST00000309246 LCE1CQ5T751 118 aa2.97□□□□□ -1.93
TPT1-201ENST00000309246 LCE3DQ9BYE3 92 aa2.97□□□□□ -1.93
TPT1-201ENST00000309246 PHGR1C9JFL3 82 aa2.5□□□□□ -2.01
TPT1-201ENST00000309246 KRTAP21-2Q3LI59 83 aa2.41□□□□□ -2.02
TPT1-201ENST00000309246 PRM1P04553 51 aa2.39□□□□□ -2.03
TPT1-201ENST00000309246 MUC19Q7Z5P9 8384 aa2.38□□□□□ -2.03
TPT1-201ENST00000309246 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
TPT1-201ENST00000309246 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 60 ms