RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 MDN1Q9NU22 5596 aa3.1□□□□□ -1.91
PTCD2-201ENST00000308077 LINC01554Q52M75 96 aa3.1□□□□□ -1.91
PTCD2-201ENST00000308077 SPRR2GQ9BYE4 73 aa3.1□□□□□ -1.91
PTCD2-201ENST00000308077 LCE4AQ5TA78 99 aa3.09□□□□□ -1.91
PTCD2-201ENST00000308077 KRTAP9-3Q9BYQ3 159 aa3.08□□□□□ -1.92
PTCD2-201ENST00000308077 KRTAP12-1P59990 96 aa3.08□□□□□ -1.92
PTCD2-201ENST00000308077 KRTAP12-2P59991 146 aa3.08□□□□□ -1.92
PTCD2-201ENST00000308077 SPINT4Q6UDR6 99 aa3.05□□□□□ -1.92
PTCD2-201ENST00000308077 KRTAP19-8Q3LI54 63 aa3.02□□□□□ -1.93
PTCD2-201ENST00000308077 K7ERS5 55 aa3.01□□□□□ -1.93
PTCD2-201ENST00000308077 KTN1-AS1Q86SY8 53 aa3.01□□□□□ -1.93
PTCD2-201ENST00000308077 MT1BP07438 61 aa3□□□□□ -1.93
PTCD2-201ENST00000308077 PLAC4Q8WY50 150 aa2.96□□□□□ -1.94
PTCD2-201ENST00000308077 ROMO1P60602 79 aa2.94□□□□□ -1.94
PTCD2-201ENST00000308077 CAMK2N1Q7Z7J9 78 aa2.94□□□□□ -1.94
PTCD2-201ENST00000308077 C10orf95Q9H7T3 257 aa2.93□□□□□ -1.94
PTCD2-201ENST00000308077 MT1XP80297 61 aa2.9□□□□□ -1.95
PTCD2-201ENST00000308077 KRTAP10-5P60370 271 aa2.89□□□□□ -1.95
PTCD2-201ENST00000308077 SPRR2EP22531 72 aa2.88□□□□□ -1.95
PTCD2-201ENST00000308077 SPRR2BP35325 72 aa2.88□□□□□ -1.95
PTCD2-201ENST00000308077 SPRR2AP35326 72 aa2.88□□□□□ -1.95
PTCD2-201ENST00000308077 NDUFAF8A1L188 74 aa2.86□□□□□ -1.95
PTCD2-201ENST00000308077 KRTAP25-1Q3LHN0 102 aa2.86□□□□□ -1.95
PTCD2-201ENST00000308077 MUC5ACP98088 5654 aa2.84□□□□□ -1.96
PTCD2-201ENST00000308077 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.83□□□□□ -1.96
PTCD2-201ENST00000308077 SPRR2DP22532 72 aa2.83□□□□□ -1.96
PTCD2-201ENST00000308077 PRO2289Q9P1D8 64 aa2.81□□□□□ -1.96
PTCD2-201ENST00000308077 LCE5AQ5TCM9 118 aa2.81□□□□□ -1.96
PTCD2-201ENST00000308077 TNP1P09430 55 aa2.8□□□□□ -1.96
PTCD2-201ENST00000308077 KRTAP10-7P60409 375 aaPredicted RBP2.78□□□□□ -1.96
PTCD2-201ENST00000308077 DSTQ03001 7570 aaKnown RBP2.78□□□□□ -1.96
PTCD2-201ENST00000308077 KRTAP10-12P60413 245 aa2.74□□□□□ -1.97
PTCD2-201ENST00000308077 LCE3AQ5TA76 89 aa2.72□□□□□ -1.97
PTCD2-201ENST00000308077 LCE1AQ5T7P2 110 aa2.71□□□□□ -1.97
PTCD2-201ENST00000308077 PP632Q6XCG6 107 aa2.68□□□□□ -1.98
PTCD2-201ENST00000308077 KRTAP8-1Q8IUC2 63 aa2.65□□□□□ -1.99
PTCD2-201ENST00000308077 KRTAP19-5Q3LI72 72 aa2.61□□□□□ -1.99
PTCD2-201ENST00000308077 LUZP6Q538Z0 58 aa2.61□□□□□ -1.99
PTCD2-201ENST00000308077 SPRR2FQ96RM1 72 aa2.6□□□□□ -1.99
PTCD2-201ENST00000308077 KRTAP12-3P60328 96 aa2.59□□□□□ -1.99
PTCD2-201ENST00000308077 KRTAP19-7Q3SYF9 63 aa2.59□□□□□ -1.99
PTCD2-201ENST00000308077 MT1EP04732 61 aa2.54□□□□□ -2
PTCD2-201ENST00000308077 KRTAP5-4Q6L8H1 288 aa2.54□□□□□ -2
PTCD2-201ENST00000308077 MT3P25713 68 aa2.53□□□□□ -2
PTCD2-201ENST00000308077 MT1LQ93083 61 aa2.49□□□□□ -2.01
PTCD2-201ENST00000308077 MT4P47944 62 aa2.48□□□□□ -2.01
PTCD2-201ENST00000308077 KRTAP19-3Q7Z4W3 81 aa2.43□□□□□ -2.02
PTCD2-201ENST00000308077 LCE3CQ5T5A8 94 aa2.43□□□□□ -2.02
PTCD2-201ENST00000308077 MT1GP13640 62 aa2.4□□□□□ -2.03
PTCD2-201ENST00000308077 MT1MQ8N339 61 aa2.39□□□□□ -2.03
PTCD2-201ENST00000308077 KRTAP4-3Q9BYR4 195 aa2.37□□□□□ -2.03
PTCD2-201ENST00000308077 KRTAP9-6A8MVA2 160 aa2.34□□□□□ -2.04
PTCD2-201ENST00000308077 LCE1FQ5T754 118 aa2.33□□□□□ -2.04
PTCD2-201ENST00000308077 KRTAP5-8O75690 187 aa2.32□□□□□ -2.04
PTCD2-201ENST00000308077 KRTAP4-4Q9BYR3 166 aa2.29□□□□□ -2.04
PTCD2-201ENST00000308077 KRTAP5-1Q6L8H4 278 aa2.28□□□□□ -2.04
PTCD2-201ENST00000308077 KRTAP5-11Q6L8G4 156 aa2.22□□□□□ -2.05
PTCD2-201ENST00000308077 KRTAP5-2Q701N4 177 aa2.18□□□□□ -2.06
PTCD2-201ENST00000308077 KRTAP5-5Q701N2 237 aaPredicted RBP2.16□□□□□ -2.06
PTCD2-201ENST00000308077 KRTAP20-2Q3LI61 65 aa2.13□□□□□ -2.07
PTCD2-201ENST00000308077 MT1AP04731 61 aa2.1□□□□□ -2.07
PTCD2-201ENST00000308077 KRTAP6-1Q3LI64 71 aa2.1□□□□□ -2.07
PTCD2-201ENST00000308077 SYNE1Q8NF91 8797 aaKnown RBP2.04□□□□□ -2.08
PTCD2-201ENST00000308077 KRTAP12-4P60329 112 aa1.98□□□□□ -2.09
PTCD2-201ENST00000308077 LCE3EQ5T5B0 92 aa1.98□□□□□ -2.09
PTCD2-201ENST00000308077 KRTAP6-2Q3LI66 62 aa1.93□□□□□ -2.1
PTCD2-201ENST00000308077 PHGR1C9JFL3 82 aa1.89□□□□□ -2.11
PTCD2-201ENST00000308077 INE1O15225 51 aa1.88□□□□□ -2.11
PTCD2-201ENST00000308077 LCE3DQ9BYE3 92 aa1.81□□□□□ -2.12
PTCD2-201ENST00000308077 LCE1EQ5T753 118 aa1.79□□□□□ -2.12
PTCD2-201ENST00000308077 OBSCNQ5VST9 7968 aa1.73□□□□□ -2.13
PTCD2-201ENST00000308077 PRM1P04553 51 aa1.58□□□□□ -2.16
PTCD2-201ENST00000308077 LCE1BQ5T7P3 118 aa1.56□□□□□ -2.16
PTCD2-201ENST00000308077 KRTAP21-1Q3LI58 79 aa1.54□□□□□ -2.16
PTCD2-201ENST00000308077 LCE1CQ5T751 118 aa1.54□□□□□ -2.16
PTCD2-201ENST00000308077 KRTAP21-2Q3LI59 83 aa1.38□□□□□ -2.19
PTCD2-201ENST00000308077 MUC19Q7Z5P9 8384 aa1.05□□□□□ -2.24
PTCD2-201ENST00000308077 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 127.7 ms