RNA–Protein interactions for RNA: ENST00000306378.10

BPTF-201, Transcript of bromodomain PHD finger transcription factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BPTF, Length 9,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-201ENST00000306378 LCE5AQ5TCM9 118 aa5.02□□□□□ -1.61
BPTF-201ENST00000306378 KRTAP2-2Q9BYT5 123 aa5□□□□□ -1.61
BPTF-201ENST00000306378 PCLOQ9Y6V0 5065 aa4.97□□□□□ -1.61
BPTF-201ENST00000306378 KRTAP4-3Q9BYR4 195 aa4.97□□□□□ -1.61
BPTF-201ENST00000306378 KRTAP4-9Q9BYQ8 210 aa4.96□□□□□ -1.62
BPTF-201ENST00000306378 LCE1AQ5T7P2 110 aa4.93□□□□□ -1.62
BPTF-201ENST00000306378 KRTAP9-4Q9BYQ2 154 aa4.9□□□□□ -1.63
BPTF-201ENST00000306378 LRP2P98164 4655 aa4.86□□□□□ -1.63
BPTF-201ENST00000306378 KRTAP9-7A8MTY7 169 aa4.86□□□□□ -1.63
BPTF-201ENST00000306378 KRTAP9-6A8MVA2 160 aa4.85□□□□□ -1.63
BPTF-201ENST00000306378 KRTAP6-1Q3LI64 71 aa4.84□□□□□ -1.63
BPTF-201ENST00000306378 KMT2CQ8NEZ4 4911 aaKnown RBP4.83□□□□□ -1.64
BPTF-201ENST00000306378 KRTAP20-1Q3LI63 56 aa4.82□□□□□ -1.64
BPTF-201ENST00000306378 BIRC6Q9NR09 4857 aa4.77□□□□□ -1.65
BPTF-201ENST00000306378 LCE4AQ5TA78 99 aa4.77□□□□□ -1.65
BPTF-201ENST00000306378 LCE1CQ5T751 118 aa4.73□□□□□ -1.65
BPTF-201ENST00000306378 LCE1EQ5T753 118 aa4.73□□□□□ -1.65
BPTF-201ENST00000306378 LCE1FQ5T754 118 aa4.73□□□□□ -1.65
BPTF-201ENST00000306378 HERC2O95714 4834 aa4.7□□□□□ -1.66
BPTF-201ENST00000306378 LPAP08519 4548 aa4.7□□□□□ -1.66
BPTF-201ENST00000306378 KRTAP9-6A0A140TA67 174 aa4.66□□□□□ -1.66
BPTF-201ENST00000306378 HERC1Q15751 4861 aa4.65□□□□□ -1.67
BPTF-201ENST00000306378 RYR2Q92736 4967 aa4.58□□□□□ -1.68
BPTF-201ENST00000306378 SYNE2Q8WXH0 6885 aaKnown RBP4.53□□□□□ -1.68
BPTF-201ENST00000306378 HYDINQ4G0P3 5121 aa4.53□□□□□ -1.68
BPTF-201ENST00000306378 KRTAP6-3Q3LI67 103 aa4.51□□□□□ -1.69
BPTF-201ENST00000306378 LCE2AQ5TA79 106 aaPredicted RBP4.43□□□□□ -1.7
BPTF-201ENST00000306378 SYNE1Q8NF91 8797 aaKnown RBP4.39□□□□□ -1.71
BPTF-201ENST00000306378 KIAA1109Q2LD37 5005 aa4.36□□□□□ -1.71
BPTF-201ENST00000306378 EPPK1P58107 5090 aaKnown RBP4.33□□□□□ -1.72
BPTF-201ENST00000306378 KRTAP9-9Q9BYP9 154 aa4.28□□□□□ -1.72
BPTF-201ENST00000306378 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.21□□□□□ -1.73
BPTF-201ENST00000306378 KRTAP4-11Q9BYQ6 195 aa4.2□□□□□ -1.74
BPTF-201ENST00000306378 HMCN2Q8NDA2 5059 aa4.03□□□□□ -1.76
BPTF-201ENST00000306378 MUC2Q02817 5179 aa4.01□□□□□ -1.77
BPTF-201ENST00000306378 RNF213Q63HN8 5207 aa3.96□□□□□ -1.78
BPTF-201ENST00000306378 FSIP2Q5CZC0 6907 aa3.89□□□□□ -1.79
BPTF-201ENST00000306378 KRTAP5-5Q701N2 237 aaPredicted RBP3.85□□□□□ -1.79
BPTF-201ENST00000306378 UBR4Q5T4S7 5183 aa3.83□□□□□ -1.8
BPTF-201ENST00000306378 KRTAP20-2Q3LI61 65 aa3.75□□□□□ -1.81
BPTF-201ENST00000306378 KRTAP5-9P26371 169 aa3.71□□□□□ -1.82
BPTF-201ENST00000306378 OBSCNQ5VST9 7968 aa3.7□□□□□ -1.82
BPTF-201ENST00000306378 FAT4Q6V0I7 4981 aa3.69□□□□□ -1.82
BPTF-201ENST00000306378 ABCA13Q86UQ4 5058 aa3.68□□□□□ -1.82
BPTF-201ENST00000306378 KRTAP4-6Q9BYQ5 205 aa3.62□□□□□ -1.83
BPTF-201ENST00000306378 KRTAP4-4Q9BYR3 166 aa3.57□□□□□ -1.84
BPTF-201ENST00000306378 KRTAP5-4Q6L8H1 288 aa3.55□□□□□ -1.84
BPTF-201ENST00000306378 MDN1Q9NU22 5596 aa3.51□□□□□ -1.85
BPTF-201ENST00000306378 KRTAP4-12Q9BQ66 201 aa3.45□□□□□ -1.86
BPTF-201ENST00000306378 KRTAP4-2Q9BYR5 136 aa3.45□□□□□ -1.86
BPTF-201ENST00000306378 KMT2DO14686 5537 aa3.44□□□□□ -1.86
BPTF-201ENST00000306378 NEBP20929 6669 aa3.42□□□□□ -1.86
BPTF-201ENST00000306378 FCGBPQ9Y6R7 5405 aaPredicted RBP3.35□□□□□ -1.87
BPTF-201ENST00000306378 DSTQ03001 7570 aaKnown RBP3.32□□□□□ -1.88
BPTF-201ENST00000306378 USH2AO75445 5202 aa3.31□□□□□ -1.88
BPTF-201ENST00000306378 MUC12Q9UKN1 5478 aa3.25□□□□□ -1.89
BPTF-201ENST00000306378 MACF1Q9UPN3 7388 aaKnown RBP3.25□□□□□ -1.89
BPTF-201ENST00000306378 SSPOA2VEC9 5147 aa3.09□□□□□ -1.91
BPTF-201ENST00000306378 KRTAP5-3Q6L8H2 238 aa3.08□□□□□ -1.92
BPTF-201ENST00000306378 KRTAP5-10Q6L8G5 202 aa3.07□□□□□ -1.92
BPTF-201ENST00000306378 MUC19Q7Z5P9 8384 aa3.07□□□□□ -1.92
BPTF-201ENST00000306378 MUC5ACP98088 5654 aa3.07□□□□□ -1.92
BPTF-201ENST00000306378 GPR98Q8WXG9 6306 aa2.96□□□□□ -1.94
BPTF-201ENST00000306378 HMCN1Q96RW7 5635 aa2.91□□□□□ -1.94
BPTF-201ENST00000306378 MUC5BQ9HC84 5762 aaPredicted RBP2.87□□□□□ -1.95
BPTF-201ENST00000306378 AHNAK2Q8IVF2 5795 aa2.79□□□□□ -1.96
BPTF-201ENST00000306378 PHGR1C9JFL3 82 aa2.7□□□□□ -1.98
BPTF-201ENST00000306378 KRTAP21-1Q3LI58 79 aa2.66□□□□□ -1.98
BPTF-201ENST00000306378 KRTAP5-2Q701N4 177 aa2.66□□□□□ -1.98
BPTF-201ENST00000306378 KRTAP5-11Q6L8G4 156 aa2.66□□□□□ -1.98
BPTF-201ENST00000306378 KRTAP5-8O75690 187 aa2.58□□□□□ -2
BPTF-201ENST00000306378 KRTAP5-1Q6L8H4 278 aa2.51□□□□□ -2.01
BPTF-201ENST00000306378 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.41□□□□□ -2.02
BPTF-201ENST00000306378 KRTAP21-2Q3LI59 83 aa2.41□□□□□ -2.02
BPTF-201ENST00000306378 AHNAKQ09666 5890 aaKnown RBP2.35□□□□□ -2.03
BPTF-201ENST00000306378 KRTAP5-7Q6L8G8 165 aa1.73□□□□□ -2.13
BPTF-201ENST00000306378 MUC16Q8WXI7 14507 aa1.72□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 76.5 ms