RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 SVIPQ8NHG7 77 aa8.88□□□□□ -0.99
U2AF1-201ENST00000291552 LCE3AQ5TA76 89 aa8.87□□□□□ -0.99
U2AF1-201ENST00000291552 SMIM26A0A096LP01 95 aa8.86□□□□□ -0.99
U2AF1-201ENST00000291552 A0A1B0GU69 56 aa8.85□□□□□ -0.99
U2AF1-201ENST00000291552 KRTAP4-3Q9BYR4 195 aa8.85□□□□□ -0.99
U2AF1-201ENST00000291552 MT4P47944 62 aa8.84□□□□□ -0.99
U2AF1-201ENST00000291552 C10orf95Q9H7T3 257 aa8.84□□□□□ -0.99
U2AF1-201ENST00000291552 AHNAK2Q8IVF2 5795 aa8.84□□□□□ -0.99
U2AF1-201ENST00000291552 KRTAP5-4Q6L8H1 288 aa8.74□□□□□ -1.01
U2AF1-201ENST00000291552 TNP1P09430 55 aa8.73□□□□□ -1.01
U2AF1-201ENST00000291552 KRTAP15-1Q3LI76 137 aa8.69□□□□□ -1.02
U2AF1-201ENST00000291552 KRTAP4-11Q9BYQ6 195 aa8.69□□□□□ -1.02
U2AF1-201ENST00000291552 KRTAP4-2Q9BYR5 136 aa8.59□□□□□ -1.03
U2AF1-201ENST00000291552 ANAPC13Q9BS18 74 aa8.55□□□□□ -1.04
U2AF1-201ENST00000291552 KRTAP5-10Q6L8G5 202 aa8.5□□□□□ -1.05
U2AF1-201ENST00000291552 KRTAP12-3P60328 96 aa8.49□□□□□ -1.05
U2AF1-201ENST00000291552 CCDC179H3BU77 68 aa8.47□□□□□ -1.05
U2AF1-201ENST00000291552 PRR15LQ9BU68 103 aa8.46□□□□□ -1.06
U2AF1-201ENST00000291552 LINC01558Q9Y6Z2 57 aa8.41□□□□□ -1.06
U2AF1-201ENST00000291552 ATP5EP56381 51 aaPredicted RBP8.37□□□□□ -1.07
U2AF1-201ENST00000291552 KRTAP5-5Q701N2 237 aaPredicted RBP8.31□□□□□ -1.08
U2AF1-201ENST00000291552 KRTAP20-2Q3LI61 65 aa8.25□□□□□ -1.09
U2AF1-201ENST00000291552 KRTAP5-3Q6L8H2 238 aa8.23□□□□□ -1.09
U2AF1-201ENST00000291552 UQCR11O14957 56 aa8.21□□□□□ -1.1
U2AF1-201ENST00000291552 KRTAP5-7Q6L8G8 165 aa8.18□□□□□ -1.1
U2AF1-201ENST00000291552 PCP4P48539 62 aa8.16□□□□□ -1.1
U2AF1-201ENST00000291552 SPRR5A0A1B0GTR4 108 aa8.15□□□□□ -1.1
U2AF1-201ENST00000291552 KRTAP25-1Q3LHN0 102 aa8.13□□□□□ -1.11
U2AF1-201ENST00000291552 TMEM258P61165 79 aa8.06□□□□□ -1.12
U2AF1-201ENST00000291552 SYNE1Q8NF91 8797 aaKnown RBP8.05□□□□□ -1.12
U2AF1-201ENST00000291552 KRTAP12-4P60329 112 aa8.04□□□□□ -1.12
U2AF1-201ENST00000291552 MIR22HGQ0VDD5 57 aa8.01□□□□□ -1.13
U2AF1-201ENST00000291552 A0A0A0MQY5 61 aa7.95□□□□□ -1.14
U2AF1-201ENST00000291552 K7ERS5 55 aa7.83□□□□□ -1.16
U2AF1-201ENST00000291552 LCE3CQ5T5A8 94 aa7.79□□□□□ -1.16
U2AF1-201ENST00000291552 PSPHP1O15172 72 aa7.75□□□□□ -1.17
U2AF1-201ENST00000291552 Q1T7F1 81 aa7.63□□□□□ -1.19
U2AF1-201ENST00000291552 KRTAP6-1Q3LI64 71 aa7.63□□□□□ -1.19
U2AF1-201ENST00000291552 KRTAP5-2Q701N4 177 aa7.63□□□□□ -1.19
U2AF1-201ENST00000291552 MT1AP04731 61 aa7.62□□□□□ -1.19
U2AF1-201ENST00000291552 V9GYY9 64 aa7.62□□□□□ -1.19
U2AF1-201ENST00000291552 KRTAP9-6A8MVA2 160 aa7.47□□□□□ -1.21
U2AF1-201ENST00000291552 A6NED7 52 aa7.43□□□□□ -1.22
U2AF1-201ENST00000291552 CDC42SE1Q9NRR8 79 aa7.43□□□□□ -1.22
U2AF1-201ENST00000291552 AHNAKQ09666 5890 aaKnown RBP7.35□□□□□ -1.23
U2AF1-201ENST00000291552 KRTAP5-8O75690 187 aa7.35□□□□□ -1.23
U2AF1-201ENST00000291552 ROMO1P60602 79 aa7.34□□□□□ -1.23
U2AF1-201ENST00000291552 KRTAP6-2Q3LI66 62 aa7.31□□□□□ -1.24
U2AF1-201ENST00000291552 MUC5BQ9HC84 5762 aaPredicted RBP7.29□□□□□ -1.24
U2AF1-201ENST00000291552 RPS28P62857 69 aaKnown RBP7.27□□□□□ -1.25
U2AF1-201ENST00000291552 MUC5ACP98088 5654 aa7.24□□□□□ -1.25
U2AF1-201ENST00000291552 OBSCNQ5VST9 7968 aa7.22□□□□□ -1.25
U2AF1-201ENST00000291552 MT3P25713 68 aa6.94□□□□□ -1.3
U2AF1-201ENST00000291552 KRTAP5-1Q6L8H4 278 aa6.89□□□□□ -1.31
U2AF1-201ENST00000291552 PRAC1Q96KF2 57 aa6.57□□□□□ -1.36
U2AF1-201ENST00000291552 LCE1EQ5T753 118 aa6.44□□□□□ -1.38
U2AF1-201ENST00000291552 NDUFAF8A1L188 74 aa6.25□□□□□ -1.41
U2AF1-201ENST00000291552 LCE1FQ5T754 118 aa6.2□□□□□ -1.42
U2AF1-201ENST00000291552 LCE1BQ5T7P3 118 aa6.09□□□□□ -1.43
U2AF1-201ENST00000291552 BRK1Q8WUW1 75 aa6.02□□□□□ -1.45
U2AF1-201ENST00000291552 LCE1CQ5T751 118 aa5.98□□□□□ -1.45
U2AF1-201ENST00000291552 KRTAP5-11Q6L8G4 156 aa5.88□□□□□ -1.47
U2AF1-201ENST00000291552 PRO0628Q9UI54 55 aa5.8□□□□□ -1.48
U2AF1-201ENST00000291552 PMAIP1Q13794 54 aa5.6□□□□□ -1.51
U2AF1-201ENST00000291552 LCE3DQ9BYE3 92 aa5.54□□□□□ -1.52
U2AF1-201ENST00000291552 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.53□□□□□ -1.52
U2AF1-201ENST00000291552 KTN1-AS1Q86SY8 53 aa5.34□□□□□ -1.55
U2AF1-201ENST00000291552 LCE3EQ5T5B0 92 aa5.32□□□□□ -1.56
U2AF1-201ENST00000291552 KRTAP21-2Q3LI59 83 aa5.03□□□□□ -1.6
U2AF1-201ENST00000291552 PHGR1C9JFL3 82 aa4.92□□□□□ -1.62
U2AF1-201ENST00000291552 KRTAP4-4Q9BYR3 166 aa4.65□□□□□ -1.67
U2AF1-201ENST00000291552 LUZP6Q538Z0 58 aa4.63□□□□□ -1.67
U2AF1-201ENST00000291552 MUC19Q7Z5P9 8384 aa4.49□□□□□ -1.69
U2AF1-201ENST00000291552 PRM1P04553 51 aa3.76□□□□□ -1.81
U2AF1-201ENST00000291552 KRTAP21-1Q3LI58 79 aa3.72□□□□□ -1.81
U2AF1-201ENST00000291552 INE1O15225 51 aa3.55□□□□□ -1.84
U2AF1-201ENST00000291552 MUC16Q8WXI7 14507 aa3.17□□□□□ -1.9
Retrieved 77 of 20,778 RNA–protein pairs in 11.6 ms