RNA–Protein interactions for RNA: ENST00000291525.11

TFF3-201, Transcript of trefoil factor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TFF3, Length 407 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-201ENST00000291525 ANAPC13Q9BS18 74 aa5.94□□□□□ -1.46
TFF3-201ENST00000291525 ATP5EP56381 51 aaPredicted RBP5.88□□□□□ -1.47
TFF3-201ENST00000291525 KRTAP12-3P60328 96 aa5.87□□□□□ -1.47
TFF3-201ENST00000291525 KRTAP4-6Q9BYQ5 205 aa5.87□□□□□ -1.47
TFF3-201ENST00000291525 AHNAK2Q8IVF2 5795 aa5.83□□□□□ -1.48
TFF3-201ENST00000291525 KRTAP5-10Q6L8G5 202 aa5.83□□□□□ -1.48
TFF3-201ENST00000291525 LINC01558Q9Y6Z2 57 aa5.82□□□□□ -1.48
TFF3-201ENST00000291525 KRTAP4-7Q9BYR0 210 aa5.79□□□□□ -1.48
TFF3-201ENST00000291525 CCDC179H3BU77 68 aa5.78□□□□□ -1.48
TFF3-201ENST00000291525 UQCR11O14957 56 aa5.76□□□□□ -1.49
TFF3-201ENST00000291525 KRTAP25-1Q3LHN0 102 aa5.68□□□□□ -1.5
TFF3-201ENST00000291525 KRTAP20-2Q3LI61 65 aa5.67□□□□□ -1.5
TFF3-201ENST00000291525 KRTAP5-3Q6L8H2 238 aa5.67□□□□□ -1.5
TFF3-201ENST00000291525 KRTAP5-5Q701N2 237 aaPredicted RBP5.66□□□□□ -1.5
TFF3-201ENST00000291525 SPRR5A0A1B0GTR4 108 aa5.65□□□□□ -1.5
TFF3-201ENST00000291525 KRTAP5-7Q6L8G8 165 aa5.65□□□□□ -1.5
TFF3-201ENST00000291525 KRTAP12-4P60329 112 aa5.63□□□□□ -1.51
TFF3-201ENST00000291525 TMEM258P61165 79 aa5.62□□□□□ -1.51
TFF3-201ENST00000291525 K7ERS5 55 aa5.6□□□□□ -1.51
TFF3-201ENST00000291525 MIR22HGQ0VDD5 57 aa5.59□□□□□ -1.51
TFF3-201ENST00000291525 KRTAP19-4Q3LI73 84 aa5.59□□□□□ -1.51
TFF3-201ENST00000291525 LOC100996750A0A140TA64 210 aa5.5□□□□□ -1.53
TFF3-201ENST00000291525 KRTAP23-1A1A580 65 aa5.46□□□□□ -1.54
TFF3-201ENST00000291525 KRTAP15-1Q3LI76 137 aa5.43□□□□□ -1.54
TFF3-201ENST00000291525 V9GYY9 64 aa5.41□□□□□ -1.54
TFF3-201ENST00000291525 SYNE1Q8NF91 8797 aaKnown RBP5.39□□□□□ -1.55
TFF3-201ENST00000291525 LCE3CQ5T5A8 94 aa5.38□□□□□ -1.55
TFF3-201ENST00000291525 PSPHP1O15172 72 aa5.35□□□□□ -1.55
TFF3-201ENST00000291525 Q1T7F1 81 aa5.29□□□□□ -1.56
TFF3-201ENST00000291525 MT1AP04731 61 aa5.25□□□□□ -1.57
TFF3-201ENST00000291525 CDC42SE1Q9NRR8 79 aa5.24□□□□□ -1.57
TFF3-201ENST00000291525 KRTAP4-11Q9BYQ6 195 aa5.22□□□□□ -1.57
TFF3-201ENST00000291525 KRTAP5-2Q701N4 177 aa5.21□□□□□ -1.58
TFF3-201ENST00000291525 A6NED7 52 aa5.2□□□□□ -1.58
TFF3-201ENST00000291525 KRTAP6-1Q3LI64 71 aa5.2□□□□□ -1.58
TFF3-201ENST00000291525 RPS28P62857 69 aaKnown RBP5.16□□□□□ -1.58
TFF3-201ENST00000291525 ROMO1P60602 79 aa5.11□□□□□ -1.59
TFF3-201ENST00000291525 KRTAP9-4Q9BYQ2 154 aa5.09□□□□□ -1.59
TFF3-201ENST00000291525 KRTAP5-8O75690 187 aa5.03□□□□□ -1.6
TFF3-201ENST00000291525 KRTAP9-6A8MVA2 160 aa5.01□□□□□ -1.61
TFF3-201ENST00000291525 KRTAP6-2Q3LI66 62 aa5.01□□□□□ -1.61
TFF3-201ENST00000291525 OBSCNQ5VST9 7968 aa4.86□□□□□ -1.63
TFF3-201ENST00000291525 KRTAP9-9Q9BYP9 154 aa4.86□□□□□ -1.63
TFF3-201ENST00000291525 MT3P25713 68 aa4.84□□□□□ -1.63
TFF3-201ENST00000291525 MUC5ACP98088 5654 aa4.83□□□□□ -1.64
TFF3-201ENST00000291525 MUC5BQ9HC84 5762 aaPredicted RBP4.81□□□□□ -1.64
TFF3-201ENST00000291525 AHNAKQ09666 5890 aaKnown RBP4.79□□□□□ -1.64
TFF3-201ENST00000291525 KRTAP5-1Q6L8H4 278 aa4.7□□□□□ -1.66
TFF3-201ENST00000291525 PCP4P48539 62 aa4.48□□□□□ -1.69
TFF3-201ENST00000291525 LCE1EQ5T753 118 aa4.47□□□□□ -1.69
TFF3-201ENST00000291525 LCE1BQ5T7P3 118 aa4.22□□□□□ -1.73
TFF3-201ENST00000291525 BRK1Q8WUW1 75 aa4.2□□□□□ -1.74
TFF3-201ENST00000291525 KRTAP4-2Q9BYR5 136 aa4.2□□□□□ -1.74
TFF3-201ENST00000291525 LCE1CQ5T751 118 aa4.14□□□□□ -1.75
TFF3-201ENST00000291525 PMAIP1Q13794 54 aa3.93□□□□□ -1.78
TFF3-201ENST00000291525 KRTAP4-12Q9BQ66 201 aa3.87□□□□□ -1.79
TFF3-201ENST00000291525 LCE3DQ9BYE3 92 aa3.86□□□□□ -1.79
TFF3-201ENST00000291525 PRAC1Q96KF2 57 aa3.81□□□□□ -1.8
TFF3-201ENST00000291525 KRTAP5-11Q6L8G4 156 aa3.78□□□□□ -1.8
TFF3-201ENST00000291525 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.75□□□□□ -1.81
TFF3-201ENST00000291525 LCE1FQ5T754 118 aa3.74□□□□□ -1.81
TFF3-201ENST00000291525 LCE3EQ5T5B0 92 aa3.6□□□□□ -1.83
TFF3-201ENST00000291525 PHGR1C9JFL3 82 aa3.43□□□□□ -1.86
TFF3-201ENST00000291525 KRTAP21-2Q3LI59 83 aa3.42□□□□□ -1.86
TFF3-201ENST00000291525 PRO0628Q9UI54 55 aa3.4□□□□□ -1.87
TFF3-201ENST00000291525 LUZP6Q538Z0 58 aa3.37□□□□□ -1.87
TFF3-201ENST00000291525 KTN1-AS1Q86SY8 53 aa3.34□□□□□ -1.87
TFF3-201ENST00000291525 SVIPQ8NHG7 77 aa3.28□□□□□ -1.88
TFF3-201ENST00000291525 KRTAP4-4Q9BYR3 166 aa3.15□□□□□ -1.91
TFF3-201ENST00000291525 MUC19Q7Z5P9 8384 aa3.01□□□□□ -1.93
TFF3-201ENST00000291525 KRTAP21-1Q3LI58 79 aa2.63□□□□□ -1.99
TFF3-201ENST00000291525 PRM1P04553 51 aa2.58□□□□□ -2
TFF3-201ENST00000291525 NDUFAF8A1L188 74 aa2.35□□□□□ -2.03
TFF3-201ENST00000291525 MUC16Q8WXI7 14507 aa2.14□□□□□ -2.07
TFF3-201ENST00000291525 INE1O15225 51 aa1.87□□□□□ -2.11
TFF3-201ENST00000291525 A0A0A0MQY5 61 aa1.8□□□□□ -2.12
TFF3-201ENST00000291525 H3BS24 57 aa1.3□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 78.8 ms