RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 KRTAP6-2Q3LI66 62 aa2.38□□□□□ -2.03
NIPBL-201ENST00000282516 KRTAP4-9Q9BYQ8 210 aa2.37□□□□□ -2.03
NIPBL-201ENST00000282516 KRTAP9-2Q9BYQ4 174 aa2.37□□□□□ -2.03
NIPBL-201ENST00000282516 KRTAP17-1Q9BYP8 105 aa2.34□□□□□ -2.03
NIPBL-201ENST00000282516 TNXBP22105 4242 aa2.34□□□□□ -2.04
NIPBL-201ENST00000282516 HERC2O95714 4834 aa2.32□□□□□ -2.04
NIPBL-201ENST00000282516 KRTAP19-2Q3LHN2 52 aa2.3□□□□□ -2.04
NIPBL-201ENST00000282516 DNHD1Q96M86 4753 aa2.3□□□□□ -2.04
NIPBL-201ENST00000282516 KRTAP19-7Q3SYF9 63 aa2.29□□□□□ -2.04
NIPBL-201ENST00000282516 LCE4AQ5TA78 99 aa2.27□□□□□ -2.05
NIPBL-201ENST00000282516 KRTAP9-6A0A140TA67 174 aa2.26□□□□□ -2.05
NIPBL-201ENST00000282516 KRTAP6-1Q3LI64 71 aa2.25□□□□□ -2.05
NIPBL-201ENST00000282516 KRTAP9-4Q9BYQ2 154 aa2.25□□□□□ -2.05
NIPBL-201ENST00000282516 HERC1Q15751 4861 aa2.23□□□□□ -2.05
NIPBL-201ENST00000282516 KRTAP2-2Q9BYT5 123 aa2.2□□□□□ -2.06
NIPBL-201ENST00000282516 MUC17Q685J3 4493 aa2.19□□□□□ -2.06
NIPBL-201ENST00000282516 KRTAP9-7A8MTY7 169 aa2.19□□□□□ -2.06
NIPBL-201ENST00000282516 HYDINQ4G0P3 5121 aa2.18□□□□□ -2.06
NIPBL-201ENST00000282516 KRTAP6-3Q3LI67 103 aa2.17□□□□□ -2.06
NIPBL-201ENST00000282516 EPPK1P58107 5090 aaKnown RBP2.15□□□□□ -2.06
NIPBL-201ENST00000282516 LRP2P98164 4655 aa2.15□□□□□ -2.07
NIPBL-201ENST00000282516 KMT2CQ8NEZ4 4911 aaKnown RBP2.15□□□□□ -2.07
NIPBL-201ENST00000282516 KRTAP9-9Q9BYP9 154 aa2.15□□□□□ -2.07
NIPBL-201ENST00000282516 BIRC6Q9NR09 4857 aa2.11□□□□□ -2.07
NIPBL-201ENST00000282516 RYR2Q92736 4967 aa2.1□□□□□ -2.07
NIPBL-201ENST00000282516 KRTAP9-6A8MVA2 160 aa2.09□□□□□ -2.07
NIPBL-201ENST00000282516 LCE2AQ5TA79 106 aaPredicted RBP2.05□□□□□ -2.08
NIPBL-201ENST00000282516 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.03□□□□□ -2.08
NIPBL-201ENST00000282516 HMCN2Q8NDA2 5059 aa2□□□□□ -2.09
NIPBL-201ENST00000282516 SYNE1Q8NF91 8797 aaKnown RBP1.99□□□□□ -2.09
NIPBL-201ENST00000282516 SYNE2Q8WXH0 6885 aaKnown RBP1.98□□□□□ -2.09
NIPBL-201ENST00000282516 KRTAP4-11Q9BYQ6 195 aa1.96□□□□□ -2.1
NIPBL-201ENST00000282516 KIAA1109Q2LD37 5005 aa1.95□□□□□ -2.1
NIPBL-201ENST00000282516 RNF213Q63HN8 5207 aa1.94□□□□□ -2.1
NIPBL-201ENST00000282516 LPAP08519 4548 aa1.91□□□□□ -2.1
NIPBL-201ENST00000282516 KRTAP20-2Q3LI61 65 aa1.89□□□□□ -2.11
NIPBL-201ENST00000282516 MUC2Q02817 5179 aa1.86□□□□□ -2.11
NIPBL-201ENST00000282516 KRTAP4-4Q9BYR3 166 aa1.78□□□□□ -2.12
NIPBL-201ENST00000282516 ABCA13Q86UQ4 5058 aa1.78□□□□□ -2.12
NIPBL-201ENST00000282516 UBR4Q5T4S7 5183 aa1.76□□□□□ -2.13
NIPBL-201ENST00000282516 FAT4Q6V0I7 4981 aa1.76□□□□□ -2.13
NIPBL-201ENST00000282516 MUC12Q9UKN1 5478 aa1.74□□□□□ -2.13
NIPBL-201ENST00000282516 KRTAP4-6Q9BYQ5 205 aa1.73□□□□□ -2.13
NIPBL-201ENST00000282516 KRTAP4-12Q9BQ66 201 aa1.71□□□□□ -2.14
NIPBL-201ENST00000282516 KRTAP4-2Q9BYR5 136 aa1.71□□□□□ -2.14
NIPBL-201ENST00000282516 FSIP2Q5CZC0 6907 aa1.7□□□□□ -2.14
NIPBL-201ENST00000282516 KRTAP5-9P26371 169 aa1.69□□□□□ -2.14
NIPBL-201ENST00000282516 KRTAP5-4Q6L8H1 288 aa1.67□□□□□ -2.14
NIPBL-201ENST00000282516 FCGBPQ9Y6R7 5405 aaPredicted RBP1.62□□□□□ -2.15
NIPBL-201ENST00000282516 NEBP20929 6669 aa1.62□□□□□ -2.15
NIPBL-201ENST00000282516 AHNAKQ09666 5890 aaKnown RBP1.6□□□□□ -2.15
NIPBL-201ENST00000282516 KRTAP5-5Q701N2 237 aaPredicted RBP1.6□□□□□ -2.15
NIPBL-201ENST00000282516 USH2AO75445 5202 aa1.59□□□□□ -2.15
NIPBL-201ENST00000282516 MDN1Q9NU22 5596 aa1.59□□□□□ -2.15
NIPBL-201ENST00000282516 GPR98Q8WXG9 6306 aa1.54□□□□□ -2.16
NIPBL-201ENST00000282516 KMT2DO14686 5537 aa1.47□□□□□ -2.17
NIPBL-201ENST00000282516 OBSCNQ5VST9 7968 aa1.47□□□□□ -2.17
NIPBL-201ENST00000282516 SSPOA2VEC9 5147 aa1.46□□□□□ -2.18
NIPBL-201ENST00000282516 KRTAP5-3Q6L8H2 238 aa1.45□□□□□ -2.18
NIPBL-201ENST00000282516 MUC5ACP98088 5654 aa1.44□□□□□ -2.18
NIPBL-201ENST00000282516 MUC19Q7Z5P9 8384 aa1.41□□□□□ -2.18
NIPBL-201ENST00000282516 AHNAK2Q8IVF2 5795 aa1.39□□□□□ -2.19
NIPBL-201ENST00000282516 PHGR1C9JFL3 82 aa1.34□□□□□ -2.19
NIPBL-201ENST00000282516 DSTQ03001 7570 aaKnown RBP1.33□□□□□ -2.2
NIPBL-201ENST00000282516 MACF1Q9UPN3 7388 aaKnown RBP1.3□□□□□ -2.2
NIPBL-201ENST00000282516 MUC5BQ9HC84 5762 aaPredicted RBP1.29□□□□□ -2.2
NIPBL-201ENST00000282516 HMCN1Q96RW7 5635 aa1.28□□□□□ -2.2
NIPBL-201ENST00000282516 KRTAP5-10Q6L8G5 202 aa1.27□□□□□ -2.21
NIPBL-201ENST00000282516 KRTAP5-8O75690 187 aa1.24□□□□□ -2.21
NIPBL-201ENST00000282516 KRTAP5-7Q6L8G8 165 aa1.19□□□□□ -2.22
NIPBL-201ENST00000282516 KRTAP5-2Q701N4 177 aa1.19□□□□□ -2.22
NIPBL-201ENST00000282516 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.15□□□□□ -2.23
NIPBL-201ENST00000282516 KRTAP5-11Q6L8G4 156 aa1.15□□□□□ -2.23
NIPBL-201ENST00000282516 KRTAP5-1Q6L8H4 278 aa1.13□□□□□ -2.23
NIPBL-201ENST00000282516 KRTAP21-1Q3LI58 79 aa1.06□□□□□ -2.24
NIPBL-201ENST00000282516 KRTAP21-2Q3LI59 83 aa1.02□□□□□ -2.25
NIPBL-201ENST00000282516 MUC16Q8WXI7 14507 aa0.74□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 1341.9 ms