RNA–Protein interactions for RNA: ENST00000248550.7

PHTF2-201, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 1 (best) BASIC

Gene PHTF2, Length 4,778 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-201ENST00000248550 KRTAP19-2Q3LHN2 52 aa1.5□□□□□ -2.17
PHTF2-201ENST00000248550 SPATA8Q6RVD6 105 aa1.5□□□□□ -2.17
PHTF2-201ENST00000248550 RNF213Q63HN8 5207 aa1.5□□□□□ -2.17
PHTF2-201ENST00000248550 NEBP20929 6669 aa1.5□□□□□ -2.17
PHTF2-201ENST00000248550 KRTAP5-9P26371 169 aa1.5□□□□□ -2.17
PHTF2-201ENST00000248550 KRTAP4-1Q9BYQ7 146 aa1.5□□□□□ -2.17
PHTF2-201ENST00000248550 MT1FP04733 61 aa1.48□□□□□ -2.17
PHTF2-201ENST00000248550 KRTAP12-2P59991 146 aa1.48□□□□□ -2.17
PHTF2-201ENST00000248550 KRTAP19-8Q3LI54 63 aa1.48□□□□□ -2.17
PHTF2-201ENST00000248550 ROMO1P60602 79 aa1.48□□□□□ -2.17
PHTF2-201ENST00000248550 SPRR2GQ9BYE4 73 aa1.47□□□□□ -2.17
PHTF2-201ENST00000248550 LINC01558Q9Y6Z2 57 aa1.45□□□□□ -2.18
PHTF2-201ENST00000248550 KRTAP5-11Q6L8G4 156 aa1.44□□□□□ -2.18
PHTF2-201ENST00000248550 SSPOA2VEC9 5147 aa1.44□□□□□ -2.18
PHTF2-201ENST00000248550 UBR4Q5T4S7 5183 aa1.44□□□□□ -2.18
PHTF2-201ENST00000248550 KRTAP5-4Q6L8H1 288 aa1.43□□□□□ -2.18
PHTF2-201ENST00000248550 SYNE2Q8WXH0 6885 aaKnown RBP1.43□□□□□ -2.18
PHTF2-201ENST00000248550 OCR1Q9BZK8 76 aa1.42□□□□□ -2.18
PHTF2-201ENST00000248550 MT1GP13640 62 aa1.42□□□□□ -2.18
PHTF2-201ENST00000248550 KRTAP13-4Q3LI77 160 aa1.4□□□□□ -2.19
PHTF2-201ENST00000248550 MT4P47944 62 aa1.38□□□□□ -2.19
PHTF2-201ENST00000248550 KRTAP12-3P60328 96 aa1.37□□□□□ -2.19
PHTF2-201ENST00000248550 MUC2Q02817 5179 aa1.34□□□□□ -2.19
PHTF2-201ENST00000248550 KRTAP19-3Q7Z4W3 81 aa1.32□□□□□ -2.2
PHTF2-201ENST00000248550 MT1BP07438 61 aa1.32□□□□□ -2.2
PHTF2-201ENST00000248550 HMCN1Q96RW7 5635 aa1.32□□□□□ -2.2
PHTF2-201ENST00000248550 KRTAP4-4Q9BYR3 166 aa1.31□□□□□ -2.2
PHTF2-201ENST00000248550 PRAC1Q96KF2 57 aa1.3□□□□□ -2.2
PHTF2-201ENST00000248550 NDUFAF8A1L188 74 aa1.27□□□□□ -2.21
PHTF2-201ENST00000248550 USH2AO75445 5202 aa1.27□□□□□ -2.21
PHTF2-201ENST00000248550 INE1O15225 51 aa1.26□□□□□ -2.21
PHTF2-201ENST00000248550 MT3P25713 68 aa1.26□□□□□ -2.21
PHTF2-201ENST00000248550 KRTAP5-1Q6L8H4 278 aa1.26□□□□□ -2.21
PHTF2-201ENST00000248550 MACF1Q9UPN3 7388 aaKnown RBP1.24□□□□□ -2.21
PHTF2-201ENST00000248550 FSIP2Q5CZC0 6907 aa1.24□□□□□ -2.21
PHTF2-201ENST00000248550 AHNAK2Q8IVF2 5795 aa1.23□□□□□ -2.21
PHTF2-201ENST00000248550 MT1XP80297 61 aa1.23□□□□□ -2.21
PHTF2-201ENST00000248550 KRTAP19-5Q3LI72 72 aa1.23□□□□□ -2.21
PHTF2-201ENST00000248550 KRTAP12-1P59990 96 aa1.22□□□□□ -2.21
PHTF2-201ENST00000248550 LCE3AQ5TA76 89 aa1.22□□□□□ -2.21
PHTF2-201ENST00000248550 LCE1EQ5T753 118 aa1.21□□□□□ -2.22
PHTF2-201ENST00000248550 MUC5BQ9HC84 5762 aaPredicted RBP1.21□□□□□ -2.22
PHTF2-201ENST00000248550 MT1MQ8N339 61 aa1.2□□□□□ -2.22
PHTF2-201ENST00000248550 AHNAKQ09666 5890 aaKnown RBP1.17□□□□□ -2.22
PHTF2-201ENST00000248550 MT1EP04732 61 aa1.16□□□□□ -2.22
PHTF2-201ENST00000248550 MT1LQ93083 61 aa1.16□□□□□ -2.22
PHTF2-201ENST00000248550 KRTAP5-7Q6L8G8 165 aa1.15□□□□□ -2.22
PHTF2-201ENST00000248550 FCGBPQ9Y6R7 5405 aaPredicted RBP1.14□□□□□ -2.23
PHTF2-201ENST00000248550 LCE3CQ5T5A8 94 aa1.13□□□□□ -2.23
PHTF2-201ENST00000248550 LCE1BQ5T7P3 118 aa1.13□□□□□ -2.23
PHTF2-201ENST00000248550 KRTAP5-8O75690 187 aa1.12□□□□□ -2.23
PHTF2-201ENST00000248550 LCE1FQ5T754 118 aa1.12□□□□□ -2.23
PHTF2-201ENST00000248550 MT1AP04731 61 aa1.12□□□□□ -2.23
PHTF2-201ENST00000248550 LCE1CQ5T751 118 aa1.11□□□□□ -2.23
PHTF2-201ENST00000248550 KMT2DO14686 5537 aa1.08□□□□□ -2.24
PHTF2-201ENST00000248550 KRTAP5-10Q6L8G5 202 aa1.06□□□□□ -2.24
PHTF2-201ENST00000248550 MDN1Q9NU22 5596 aa1.06□□□□□ -2.24
PHTF2-201ENST00000248550 KRTAP19-7Q3SYF9 63 aa1.05□□□□□ -2.24
PHTF2-201ENST00000248550 KRTAP20-2Q3LI61 65 aa1.04□□□□□ -2.24
PHTF2-201ENST00000248550 KRTAP4-3Q9BYR4 195 aa1.03□□□□□ -2.24
PHTF2-201ENST00000248550 LCE3DQ9BYE3 92 aa1.01□□□□□ -2.25
PHTF2-201ENST00000248550 MUC5ACP98088 5654 aa0.99□□□□□ -2.25
PHTF2-201ENST00000248550 KRTAP9-6A8MVA2 160 aa0.99□□□□□ -2.25
PHTF2-201ENST00000248550 LCE3EQ5T5B0 92 aa0.99□□□□□ -2.25
PHTF2-201ENST00000248550 KRTAP5-5Q701N2 237 aaPredicted RBP0.97□□□□□ -2.25
PHTF2-201ENST00000248550 DSTQ03001 7570 aaKnown RBP0.95□□□□□ -2.26
PHTF2-201ENST00000248550 MUC12Q9UKN1 5478 aa0.95□□□□□ -2.26
PHTF2-201ENST00000248550 KRTAP6-2Q3LI66 62 aa0.95□□□□□ -2.26
PHTF2-201ENST00000248550 SYNE1Q8NF91 8797 aaKnown RBP0.94□□□□□ -2.26
PHTF2-201ENST00000248550 PHGR1C9JFL3 82 aa0.92□□□□□ -2.26
PHTF2-201ENST00000248550 KRTAP6-1Q3LI64 71 aa0.85□□□□□ -2.27
PHTF2-201ENST00000248550 OBSCNQ5VST9 7968 aa0.81□□□□□ -2.28
PHTF2-201ENST00000248550 KRTAP21-1Q3LI58 79 aa0.81□□□□□ -2.28
PHTF2-201ENST00000248550 KRTAP21-2Q3LI59 83 aa0.7□□□□□ -2.3
PHTF2-201ENST00000248550 MUC19Q7Z5P9 8384 aa0.63□□□□□ -2.31
PHTF2-201ENST00000248550 PRM1P04553 51 aa0.6□□□□□ -2.31
PHTF2-201ENST00000248550 MUC16Q8WXI7 14507 aa0.46□□□□□ -2.34
Retrieved 77 of 20,778 RNA–protein pairs in 12.2 ms