RNA–Protein interactions for RNA: ENST00000229384.5

GATC-201, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-201ENST00000229384 CCDC179H3BU77 68 aa5.14□□□□□ -1.59
GATC-201ENST00000229384 LINC01558Q9Y6Z2 57 aa5.08□□□□□ -1.6
GATC-201ENST00000229384 HMCN1Q96RW7 5635 aa5.07□□□□□ -1.6
GATC-201ENST00000229384 KRTAP4-7Q9BYR0 210 aa5.07□□□□□ -1.6
GATC-201ENST00000229384 KRTAP4-6Q9BYQ5 205 aa5.06□□□□□ -1.6
GATC-201ENST00000229384 ATP5EP56381 51 aaPredicted RBP5.05□□□□□ -1.6
GATC-201ENST00000229384 PRR15LQ9BU68 103 aa5.05□□□□□ -1.6
GATC-201ENST00000229384 KRTAP12-3P60328 96 aa5.02□□□□□ -1.61
GATC-201ENST00000229384 AHNAK2Q8IVF2 5795 aa4.97□□□□□ -1.61
GATC-201ENST00000229384 KRTAP5-10Q6L8G5 202 aa4.96□□□□□ -1.62
GATC-201ENST00000229384 UQCR11O14957 56 aa4.92□□□□□ -1.62
GATC-201ENST00000229384 KRTAP5-5Q701N2 237 aaPredicted RBP4.91□□□□□ -1.62
GATC-201ENST00000229384 TMEM258P61165 79 aa4.89□□□□□ -1.63
GATC-201ENST00000229384 KRTAP25-1Q3LHN0 102 aa4.84□□□□□ -1.63
GATC-201ENST00000229384 KRTAP20-2Q3LI61 65 aa4.84□□□□□ -1.63
GATC-201ENST00000229384 MIR22HGQ0VDD5 57 aa4.81□□□□□ -1.64
GATC-201ENST00000229384 KRTAP5-3Q6L8H2 238 aa4.81□□□□□ -1.64
GATC-201ENST00000229384 LOC100996750A0A140TA64 210 aa4.8□□□□□ -1.64
GATC-201ENST00000229384 SPRR5A0A1B0GTR4 108 aa4.79□□□□□ -1.64
GATC-201ENST00000229384 KRTAP5-7Q6L8G8 165 aa4.77□□□□□ -1.65
GATC-201ENST00000229384 KRTAP19-4Q3LI73 84 aa4.73□□□□□ -1.65
GATC-201ENST00000229384 KRTAP12-4P60329 112 aa4.71□□□□□ -1.66
GATC-201ENST00000229384 SYNE1Q8NF91 8797 aaKnown RBP4.7□□□□□ -1.66
GATC-201ENST00000229384 KRTAP23-1A1A580 65 aa4.69□□□□□ -1.66
GATC-201ENST00000229384 KRTAP15-1Q3LI76 137 aa4.67□□□□□ -1.66
GATC-201ENST00000229384 K7ERS5 55 aa4.66□□□□□ -1.66
GATC-201ENST00000229384 PSPHP1O15172 72 aa4.66□□□□□ -1.66
GATC-201ENST00000229384 Q1T7F1 81 aa4.65□□□□□ -1.67
GATC-201ENST00000229384 LCE3CQ5T5A8 94 aa4.63□□□□□ -1.67
GATC-201ENST00000229384 V9GYY9 64 aa4.62□□□□□ -1.67
GATC-201ENST00000229384 PCP4P48539 62 aa4.53□□□□□ -1.68
GATC-201ENST00000229384 MT1AP04731 61 aa4.51□□□□□ -1.69
GATC-201ENST00000229384 KRTAP6-1Q3LI64 71 aa4.51□□□□□ -1.69
GATC-201ENST00000229384 KRTAP5-2Q701N4 177 aa4.5□□□□□ -1.69
GATC-201ENST00000229384 RPS28P62857 69 aaKnown RBP4.48□□□□□ -1.69
GATC-201ENST00000229384 A6NED7 52 aa4.46□□□□□ -1.7
GATC-201ENST00000229384 CDC42SE1Q9NRR8 79 aa4.45□□□□□ -1.7
GATC-201ENST00000229384 KRTAP9-6A8MVA2 160 aa4.44□□□□□ -1.7
GATC-201ENST00000229384 KRTAP4-11Q9BYQ6 195 aa4.44□□□□□ -1.7
GATC-201ENST00000229384 ROMO1P60602 79 aa4.4□□□□□ -1.71
GATC-201ENST00000229384 KRTAP9-4Q9BYQ2 154 aa4.38□□□□□ -1.71
GATC-201ENST00000229384 KRTAP5-8O75690 187 aa4.32□□□□□ -1.72
GATC-201ENST00000229384 KRTAP6-2Q3LI66 62 aa4.3□□□□□ -1.72
GATC-201ENST00000229384 MT3P25713 68 aa4.09□□□□□ -1.75
GATC-201ENST00000229384 OBSCNQ5VST9 7968 aa4.06□□□□□ -1.76
GATC-201ENST00000229384 MUC5ACP98088 5654 aa4.05□□□□□ -1.76
GATC-201ENST00000229384 KRTAP5-1Q6L8H4 278 aa4.05□□□□□ -1.76
GATC-201ENST00000229384 KRTAP9-9Q9BYP9 154 aa4.05□□□□□ -1.76
GATC-201ENST00000229384 AHNAKQ09666 5890 aaKnown RBP4.03□□□□□ -1.76
GATC-201ENST00000229384 MUC5BQ9HC84 5762 aaPredicted RBP4.02□□□□□ -1.77
GATC-201ENST00000229384 BRK1Q8WUW1 75 aa3.91□□□□□ -1.78
GATC-201ENST00000229384 LCE1EQ5T753 118 aa3.8□□□□□ -1.8
GATC-201ENST00000229384 PMAIP1Q13794 54 aa3.7□□□□□ -1.82
GATC-201ENST00000229384 KRTAP4-2Q9BYR5 136 aa3.65□□□□□ -1.83
GATC-201ENST00000229384 PRO0628Q9UI54 55 aa3.61□□□□□ -1.83
GATC-201ENST00000229384 LCE1BQ5T7P3 118 aa3.56□□□□□ -1.84
GATC-201ENST00000229384 LCE1CQ5T751 118 aa3.54□□□□□ -1.84
GATC-201ENST00000229384 PRAC1Q96KF2 57 aa3.43□□□□□ -1.86
GATC-201ENST00000229384 KTN1-AS1Q86SY8 53 aa3.41□□□□□ -1.86
GATC-201ENST00000229384 KRTAP4-12Q9BQ66 201 aa3.32□□□□□ -1.88
GATC-201ENST00000229384 LCE3DQ9BYE3 92 aa3.3□□□□□ -1.88
GATC-201ENST00000229384 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.23□□□□□ -1.89
GATC-201ENST00000229384 KRTAP5-11Q6L8G4 156 aa3.22□□□□□ -1.89
GATC-201ENST00000229384 SVIPQ8NHG7 77 aa3.21□□□□□ -1.9
GATC-201ENST00000229384 LCE1FQ5T754 118 aa3.15□□□□□ -1.91
GATC-201ENST00000229384 LCE3EQ5T5B0 92 aa3.08□□□□□ -1.92
GATC-201ENST00000229384 LUZP6Q538Z0 58 aa3.01□□□□□ -1.93
GATC-201ENST00000229384 KRTAP21-2Q3LI59 83 aa2.99□□□□□ -1.93
GATC-201ENST00000229384 PHGR1C9JFL3 82 aa2.84□□□□□ -1.95
GATC-201ENST00000229384 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
GATC-201ENST00000229384 MUC19Q7Z5P9 8384 aa2.54□□□□□ -2
GATC-201ENST00000229384 NDUFAF8A1L188 74 aa2.51□□□□□ -2.01
GATC-201ENST00000229384 PRM1P04553 51 aa2.26□□□□□ -2.05
GATC-201ENST00000229384 A0A0A0MQY5 61 aa2.16□□□□□ -2.06
GATC-201ENST00000229384 INE1O15225 51 aa2.15□□□□□ -2.07
GATC-201ENST00000229384 KRTAP21-1Q3LI58 79 aa2.15□□□□□ -2.07
GATC-201ENST00000229384 MUC16Q8WXI7 14507 aa1.87□□□□□ -2.11
GATC-201ENST00000229384 H3BS24 57 aa1.37□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 12.1 ms