RNA–Protein interactions for RNA: ENSMUST00000200963.3

Scn8a-208, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn8a, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-208ENSMUST00000200963 Gm9970F6ZED4 185 aa9.35□□□□□ -0.91
Scn8a-208ENSMUST00000200963 Gm37988J3QM41 62 aa9.35□□□□□ -0.91
Scn8a-208ENSMUST00000200963 Igll1P20764 209 aa9.35□□□□□ -0.91
Scn8a-208ENSMUST00000200963 Ighv1-4A0A075B5T4 117 aa9.35□□□□□ -0.91
Scn8a-208ENSMUST00000200963 Igkv2-137A0A0B4J1H6 120 aa9.35□□□□□ -0.91
Scn8a-208ENSMUST00000200963 Wipf2Q6PEV3 440 aa9.35□□□□□ -0.91
Scn8a-208ENSMUST00000200963 Dock8Q8C147 2100 aa9.35□□□□□ -0.91
Scn8a-208ENSMUST00000200963 Ighv1-64A0A075B5X3 117 aa9.35□□□□□ -0.91
Scn8a-208ENSMUST00000200963 Fam24aQ8CF27 98 aa9.35□□□□□ -0.91
Scn8a-208ENSMUST00000200963 Zc2hc1bQ9D534 172 aa9.35□□□□□ -0.91
Scn8a-208ENSMUST00000200963 Trav14-3A0A075B607 120 aa9.34□□□□□ -0.91
Scn8a-208ENSMUST00000200963 Ighv1-23A0A0A6YVW3 117 aa9.34□□□□□ -0.91
Scn8a-208ENSMUST00000200963 Ighv8-2A0A0A6YW58 119 aa9.34□□□□□ -0.91
Scn8a-208ENSMUST00000200963 Nop10Q9CQS2 64 aa9.34□□□□□ -0.91
Scn8a-208ENSMUST00000200963 Ighv1-74A0A0G2JGK2 117 aa9.34□□□□□ -0.91
Scn8a-208ENSMUST00000200963 Igkv6-15A0A140T8M5 115 aa9.34□□□□□ -0.91
Scn8a-208ENSMUST00000200963 NpsP0C0P8 89 aa9.34□□□□□ -0.91
Scn8a-208ENSMUST00000200963 Zfp36l1P23950 338 aa9.34□□□□□ -0.91
Scn8a-208ENSMUST00000200963 Dnajc13D4AFX7 2248 aaKnown RBP9.34□□□□□ -0.91
Scn8a-208ENSMUST00000200963 4930447F04RikA2AFR2 126 aa9.34□□□□□ -0.91
Scn8a-208ENSMUST00000200963 Ube2bP63147 152 aa9.34□□□□□ -0.91
Scn8a-208ENSMUST00000200963 Foxf1Q61080 378 aa9.34□□□□□ -0.91
Scn8a-208ENSMUST00000200963 Olfr312Q7TRZ9 308 aa9.34□□□□□ -0.91
Scn8a-208ENSMUST00000200963 Ndufs7Q9DC70 224 aa9.34□□□□□ -0.91
Scn8a-208ENSMUST00000200963 Fhl3Q9R059 289 aa9.34□□□□□ -0.91
Scn8a-208ENSMUST00000200963 A930003A15RikQ3U552 87 aa9.33□□□□□ -0.92
Scn8a-208ENSMUST00000200963 BC048562Q80ZQ7 204 aa9.33□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Defb29Q8BGW9 78 aa9.33□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Heatr1G3X9B1 2143 aaKnown RBP9.33□□□□□ -0.92
Scn8a-208ENSMUST00000200963 GfyJ3KML8 504 aa9.33□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Mustn1Q99JI1 82 aa9.33□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Tmem14cQ9CQN6 114 aa9.33□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Cysrt1Q9D1E4 142 aa9.33□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Fam216bQ8CC14 138 aa9.33□□□□□ -0.92
Scn8a-208ENSMUST00000200963 4930415O20RikQ8CDT5 131 aa9.33□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Ighv6-7A0A0A6YWU3 119 aa9.33□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Cep290Q6A078 2472 aa9.33□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Lrrk1Q3UHC2 2014 aa9.32□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Gm20499D3Z4G5 72 aa9.32□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Nup214Q80U93 2085 aa9.32□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Igkv12-89A0A0G2JGW8 112 aa9.32□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Mbd6Q3TY92 1003 aa9.32□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Il22ra2Q80XF5 230 aa9.32□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Slc25a48Q8BW66 306 aa9.32□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Vopp1Q8R1C3 172 aa9.32□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Wdr81Q5ND34 1934 aa9.32□□□□□ -0.92
Scn8a-208ENSMUST00000200963 P01739 132 aa9.32□□□□□ -0.92
Scn8a-208ENSMUST00000200963 P01794 123 aa9.32□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Olfr313Q5NC55 308 aa9.32□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Foxc1Q61572 553 aa9.32□□□□□ -0.92
Scn8a-208ENSMUST00000200963 P01791 123 aa9.32□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Prh1P05142 261 aa9.32□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Olfr311Q5NC59 308 aa9.31□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Tomm6Q9CQN3 74 aa9.31□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Ifitm1Q9D103 106 aa9.31□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Them7Q9DCP4 223 aa9.31□□□□□ -0.92
Scn8a-208ENSMUST00000200963 PpbpQ9EQI5 113 aa9.31□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Dock3Q8CIQ7 2027 aa9.31□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Zc2hc1aQ8BJH1 324 aa9.31□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Ighv1-50A0A075B5W1 117 aa9.31□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Zcwpw2Q08EN7 125 aa9.31□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Srsf2Q62093 221 aaKnown RBP9.31□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Zmat4Q8BZ94 229 aa9.31□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Gm21994F6T2D2 329 aa9.31□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Mrps12O35680 139 aa9.31□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Ndufa1O35683 70 aa9.31□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Trav4n-4A0A075B615 110 aa9.3□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Ighv1-19A0A0A6YWX0 117 aa9.3□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Dennd4aE9Q8V6 1869 aa9.3□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Ppp1r32Q148A4 427 aa9.3□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Tal2Q62282 108 aa9.3□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Cd300eQ8K249 196 aa9.3□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Ccl24Q9JKC0 119 aa9.3□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Zfhx2Q2MHN3 2562 aa9.3□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Gata1P17679 413 aa9.3□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Ndufa12Q7TMF3 145 aaKnown RBP9.3□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Thsd7bQ6P4U0 1607 aa9.3□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Gm20730A0A075B5J6 119 aa9.3□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Ighv8-8A0A0A6YXQ0 119 aa9.29□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Gpr179E9PY61 2293 aa9.29□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Ints1Q6P4S8 2195 aa9.29□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Gm5941Q497P9 117 aa9.29□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Pom121l2Q5SW25 972 aa9.29□□□□□ -0.92
Scn8a-208ENSMUST00000200963 LoxP28301 411 aa9.29□□□□□ -0.92
Scn8a-208ENSMUST00000200963 BB014433Q8C5R5 389 aa9.29□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Gm15091B1AZM2 449 aa9.29□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Loxl1P97873 607 aa9.29□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Lyrm9Q3UN90 78 aa9.29□□□□□ -0.92
Scn8a-208ENSMUST00000200963 NpbQ8K4P1 119 aa9.29□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Gm45861A0A1B0GRY3 1923 aa9.29□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Gm17455G3UW87 128 aa9.29□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Gm20726G3UX18 150 aa9.29□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Rnf138Q9CQE0 245 aaKnown RBP9.29□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Dazap2Q9DCP9 168 aa9.29□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Gtsf1Q9DAN6 167 aa9.28□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Plxnd1Q3UH93 1925 aa9.28□□□□□ -0.92
Scn8a-208ENSMUST00000200963 SelenowP63300 88 aa9.28□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Gm11733Q8BQP1 125 aa9.28□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Trbv14A0A140T8L9 115 aa9.28□□□□□ -0.92
Scn8a-208ENSMUST00000200963 Igkv1-122A0A140T8M9 119 aa9.28□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 64.6 ms