RNA–Protein interactions for RNA: ENSMUST00000173369.1

Trim39-205, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

TSL 1 (best) BASIC

Gene Trim39, Length 2,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-205ENSMUST00000173369 P01787 123 aa6.35□□□□□ -1.39
Trim39-205ENSMUST00000173369 Hbb-yP02104 147 aa6.35□□□□□ -1.39
Trim39-205ENSMUST00000173369 Obox7Q4KL20 218 aa6.35□□□□□ -1.39
Trim39-205ENSMUST00000173369 Coq2Q66JT7 374 aa6.35□□□□□ -1.39
Trim39-205ENSMUST00000173369 Znf474Q6V5K9 347 aa6.35□□□□□ -1.39
Trim39-205ENSMUST00000173369 Muc15Q8C6Z1 331 aa6.35□□□□□ -1.39
Trim39-205ENSMUST00000173369 Tm4sf20Q9CQY8 226 aa6.35□□□□□ -1.39
Trim39-205ENSMUST00000173369 PifoQ9D9W1 207 aa6.35□□□□□ -1.39
Trim39-205ENSMUST00000173369 Wfdc15bQ9JHY4 80 aa6.35□□□□□ -1.39
Trim39-205ENSMUST00000173369 Cml1Q9JIZ0 222 aa6.35□□□□□ -1.39
Trim39-205ENSMUST00000173369 Olfr284A0A0U1RP76 321 aa6.35□□□□□ -1.39
Trim39-205ENSMUST00000173369 P01659 112 aa6.35□□□□□ -1.39
Trim39-205ENSMUST00000173369 Tnfrsf13bQ9ET35 249 aa6.35□□□□□ -1.39
Trim39-205ENSMUST00000173369 Mcrip2Q9CQB2 160 aaKnown RBP6.34□□□□□ -1.39
Trim39-205ENSMUST00000173369 Trappc2lQ9JME7 139 aa6.34□□□□□ -1.39
Trim39-205ENSMUST00000173369 Nat6Q9R123 314 aa6.34□□□□□ -1.39
Trim39-205ENSMUST00000173369 Gm14412A2ARR7 526 aa6.34□□□□□ -1.39
Trim39-205ENSMUST00000173369 Olfr1016A2ASV2 309 aa6.34□□□□□ -1.39
Trim39-205ENSMUST00000173369 1810062G17RikG3X8Y2 129 aa6.34□□□□□ -1.39
Trim39-205ENSMUST00000173369 Gm6871L7N248 545 aa6.34□□□□□ -1.39
Trim39-205ENSMUST00000173369 Syngr2O55101 224 aa6.34□□□□□ -1.39
Trim39-205ENSMUST00000173369 Rnf212F6TQD1 307 aa6.33□□□□□ -1.4
Trim39-205ENSMUST00000173369 Tcrg-C3L7N479 172 aa6.33□□□□□ -1.4
Trim39-205ENSMUST00000173369 TcraP01849 138 aa6.33□□□□□ -1.4
Trim39-205ENSMUST00000173369 P03985 172 aa6.33□□□□□ -1.4
Trim39-205ENSMUST00000173369 Tmem140Q8BGY5 185 aa6.33□□□□□ -1.4
Trim39-205ENSMUST00000173369 Slc25a39Q9D8K8 359 aa6.33□□□□□ -1.4
Trim39-205ENSMUST00000173369 Trav3-4A0A075B654 114 aa6.33□□□□□ -1.4
Trim39-205ENSMUST00000173369 Trav6d-5A0A075B6B9 112 aa6.33□□□□□ -1.4
Trim39-205ENSMUST00000173369 Tcte2E9PY37 120 aa6.33□□□□□ -1.4
Trim39-205ENSMUST00000173369 Trav8d-1Q5R1H8 112 aa6.33□□□□□ -1.4
Trim39-205ENSMUST00000173369 Rph3alQ768S4 302 aa6.33□□□□□ -1.4
Trim39-205ENSMUST00000173369 H2-M10.6Q85ZW5 330 aa6.33□□□□□ -1.4
Trim39-205ENSMUST00000173369 VsirQ9D659 308 aa6.33□□□□□ -1.4
Trim39-205ENSMUST00000173369 Trav16A0A075B653 116 aa6.32□□□□□ -1.4
Trim39-205ENSMUST00000173369 Olfr368Q8VF22 327 aa6.32□□□□□ -1.4
Trim39-205ENSMUST00000173369 Tmem190Q9D2E9 166 aa6.32□□□□□ -1.4
Trim39-205ENSMUST00000173369 Gm28269A0A087WSG3 125 aa6.32□□□□□ -1.4
Trim39-205ENSMUST00000173369 Igkv14-130A0A0G2JF45 117 aa6.32□□□□□ -1.4
Trim39-205ENSMUST00000173369 Gm6993A0A1W2P738 69 aa6.32□□□□□ -1.4
Trim39-205ENSMUST00000173369 P04944 107 aa6.32□□□□□ -1.4
Trim39-205ENSMUST00000173369 Mamld1P0C6A2 803 aa6.32□□□□□ -1.4
Trim39-205ENSMUST00000173369 Hspe1Q64433 102 aaKnown RBP6.32□□□□□ -1.4
Trim39-205ENSMUST00000173369 Gatad1Q920S3 266 aa6.32□□□□□ -1.4
Trim39-205ENSMUST00000173369 Gm29289A0A087WPY7 166 aa6.32□□□□□ -1.4
Trim39-205ENSMUST00000173369 Ly6c2P0CW03 131 aa6.32□□□□□ -1.4
Trim39-205ENSMUST00000173369 Slc35b1P97858 322 aa6.32□□□□□ -1.4
Trim39-205ENSMUST00000173369 Gm21370Q3T9V6 190 aa6.32□□□□□ -1.4
Trim39-205ENSMUST00000173369 Vmn1r195Q5SVD6 316 aa6.32□□□□□ -1.4
Trim39-205ENSMUST00000173369 Zmat4Q8BZ94 229 aa6.32□□□□□ -1.4
Trim39-205ENSMUST00000173369 Olfr1243Q8VGM7 305 aa6.32□□□□□ -1.4
Trim39-205ENSMUST00000173369 Sval2Q99N75 144 aa6.32□□□□□ -1.4
Trim39-205ENSMUST00000173369 4930544G11RikQ9CR99 193 aa6.32□□□□□ -1.4
Trim39-205ENSMUST00000173369 Igkv4-90A0A075B5L3 117 aa6.31□□□□□ -1.4
Trim39-205ENSMUST00000173369 Trav17A0A075B655 113 aa6.31□□□□□ -1.4
Trim39-205ENSMUST00000173369 Gm12845A0A0N4SUM5 588 aa6.31□□□□□ -1.4
Trim39-205ENSMUST00000173369 Defa13P50711 93 aa6.31□□□□□ -1.4
Trim39-205ENSMUST00000173369 Rhox10Q4TU83 196 aa6.31□□□□□ -1.4
Trim39-205ENSMUST00000173369 Vmn1r197Q8R265 298 aa6.31□□□□□ -1.4
Trim39-205ENSMUST00000173369 Gm10306Q9CUK2 115 aa6.31□□□□□ -1.4
Trim39-205ENSMUST00000173369 Q9DAL9 119 aa6.31□□□□□ -1.4
Trim39-205ENSMUST00000173369 Trbv17A0A140T8P8 114 aa6.31□□□□□ -1.4
Trim39-205ENSMUST00000173369 1810011H11RikE9PVZ2 95 aa6.31□□□□□ -1.4
Trim39-205ENSMUST00000173369 Rpl23P62830 140 aaKnown RBP6.31□□□□□ -1.4
Trim39-205ENSMUST00000173369 4930596D02RikQ3V0H9 216 aa6.31□□□□□ -1.4
Trim39-205ENSMUST00000173369 Nkg7Q99PA5 165 aa6.31□□□□□ -1.4
Trim39-205ENSMUST00000173369 PpdpfQ9CR37 115 aa6.31□□□□□ -1.4
Trim39-205ENSMUST00000173369 Atxn7l1Q9CZ05 146 aa6.31□□□□□ -1.4
Trim39-205ENSMUST00000173369 Wfdc6bF6ULY1 148 aa6.3□□□□□ -1.4
Trim39-205ENSMUST00000173369 P01915 264 aa6.3□□□□□ -1.4
Trim39-205ENSMUST00000173369 Crip1P63254 77 aa6.3□□□□□ -1.4
Trim39-205ENSMUST00000173369 SelplgQ62170 397 aa6.3□□□□□ -1.4
Trim39-205ENSMUST00000173369 2200002J24RikQ9D807 110 aa6.3□□□□□ -1.4
Trim39-205ENSMUST00000173369 Cbln1Q9R171 193 aa6.3□□□□□ -1.4
Trim39-205ENSMUST00000173369 Dnah6E9Q0B6 4144 aa6.3□□□□□ -1.4
Trim39-205ENSMUST00000173369 Gm6525A0A0A6YW33 106 aa6.3□□□□□ -1.4
Trim39-205ENSMUST00000173369 Olfr235E9Q9Z6 312 aa6.3□□□□□ -1.4
Trim39-205ENSMUST00000173369 Slc25a5P51881 298 aaKnown RBP6.3□□□□□ -1.4
Trim39-205ENSMUST00000173369 ParlQ5XJY4 377 aa6.3□□□□□ -1.4
Trim39-205ENSMUST00000173369 Pef1Q8BFY6 275 aa6.3□□□□□ -1.4
Trim39-205ENSMUST00000173369 Gm10300Q8C8P7 189 aa6.3□□□□□ -1.4
Trim39-205ENSMUST00000173369 Olfr1431Q8VF59 312 aa6.3□□□□□ -1.4
Trim39-205ENSMUST00000173369 Tmem147Q9CQG6 224 aa6.3□□□□□ -1.4
Trim39-205ENSMUST00000173369 Dynlrb2Q9DAJ5 96 aa6.3□□□□□ -1.4
Trim39-205ENSMUST00000173369 Olfr954Q9EQB6 314 aa6.3□□□□□ -1.4
Trim39-205ENSMUST00000173369 Gm26920S4R2A5 56 aa6.3□□□□□ -1.4
Trim39-205ENSMUST00000173369 Gm28285A0A087WQ54 102 aa6.29□□□□□ -1.4
Trim39-205ENSMUST00000173369 Trbv1A0A0B4J1G7 116 aa6.29□□□□□ -1.4
Trim39-205ENSMUST00000173369 Gm6970F7DCP6 221 aa6.29□□□□□ -1.4
Trim39-205ENSMUST00000173369 Gm5294J3QP53 216 aa6.29□□□□□ -1.4
Trim39-205ENSMUST00000173369 SriQ6P069 198 aa6.29□□□□□ -1.4
Trim39-205ENSMUST00000173369 LenepQ9WVB6 61 aa6.29□□□□□ -1.4
Trim39-205ENSMUST00000173369 DeddQ9Z1L3 318 aa6.29□□□□□ -1.4
Trim39-205ENSMUST00000173369 Trav21-dv12A0A075B6C4 109 aa6.29□□□□□ -1.4
Trim39-205ENSMUST00000173369 Gm21900J3QP38 180 aa6.29□□□□□ -1.4
Trim39-205ENSMUST00000173369 P01789 122 aa6.29□□□□□ -1.4
Trim39-205ENSMUST00000173369 Gm10803Q3TZS6 135 aa6.29□□□□□ -1.4
Trim39-205ENSMUST00000173369 Htr1dQ61224 374 aa6.29□□□□□ -1.4
Trim39-205ENSMUST00000173369 Snx22Q8C084 192 aa6.29□□□□□ -1.4
Trim39-205ENSMUST00000173369 Olfr1256Q8VGP1 306 aa6.29□□□□□ -1.4
Retrieved 100 of 22,080 RNA–protein pairs in 93.5 ms