RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 Foxi2Q3I5G5 311 aa13.09□□□□□ -0.31
Col17a1-202ENSMUST00000086923 Cep290Q6A078 2472 aa13.09□□□□□ -0.31
Col17a1-202ENSMUST00000086923 Gm9513B3GLJ6 99 aa13.09□□□□□ -0.31
Col17a1-202ENSMUST00000086923 UrahQ9CRB3 118 aa13.09□□□□□ -0.31
Col17a1-202ENSMUST00000086923 Lynx1P0DP60 116 aa13.08□□□□□ -0.32
Col17a1-202ENSMUST00000086923 Q9DAQ5 155 aa13.08□□□□□ -0.32
Col17a1-202ENSMUST00000086923 Ighv1-49A0A0A6YWX2 117 aa13.08□□□□□ -0.32
Col17a1-202ENSMUST00000086923 E130218I03RikA0A0U1RNU5 63 aa13.08□□□□□ -0.32
Col17a1-202ENSMUST00000086923 Zcchc24B2RVL6 241 aaKnown RBP13.08□□□□□ -0.32
Col17a1-202ENSMUST00000086923 Edn2P22389 175 aa13.08□□□□□ -0.32
Col17a1-202ENSMUST00000086923 SelenowP63300 88 aa13.08□□□□□ -0.32
Col17a1-202ENSMUST00000086923 Ss18l1Q8BW22 402 aa13.08□□□□□ -0.32
Col17a1-202ENSMUST00000086923 DnlzQ9D113 177 aa13.08□□□□□ -0.32
Col17a1-202ENSMUST00000086923 Sipa1l3G3X9J0 1776 aa13.08□□□□□ -0.32
Col17a1-202ENSMUST00000086923 NpbQ8K4P1 119 aa13.08□□□□□ -0.32
Col17a1-202ENSMUST00000086923 Gm10775Q3V290 127 aa13.07□□□□□ -0.32
Col17a1-202ENSMUST00000086923 Dock1Q8BUR4 1865 aa13.07□□□□□ -0.32
Col17a1-202ENSMUST00000086923 Rnf166Q3U9F6 237 aa13.07□□□□□ -0.32
Col17a1-202ENSMUST00000086923 5730522E02RikQ5SP45 163 aa13.07□□□□□ -0.32
Col17a1-202ENSMUST00000086923 Gm10295Q8CCF3 114 aa13.07□□□□□ -0.32
Col17a1-202ENSMUST00000086923 Ndufb4Q9CQC7 129 aa13.07□□□□□ -0.32
Col17a1-202ENSMUST00000086923 P01837 106 aa13.07□□□□□ -0.32
Col17a1-202ENSMUST00000086923 Parp4E9PYK3 1969 aa13.07□□□□□ -0.32
Col17a1-202ENSMUST00000086923 PkdrejQ9Z0T6 2126 aa13.07□□□□□ -0.32
Col17a1-202ENSMUST00000086923 MifP34884 115 aaKnown RBP13.07□□□□□ -0.32
Col17a1-202ENSMUST00000086923 Lyrm9Q3UN90 78 aa13.07□□□□□ -0.32
Col17a1-202ENSMUST00000086923 Olfr311Q5NC59 308 aa13.07□□□□□ -0.32
Col17a1-202ENSMUST00000086923 Cysrt1Q9D1E4 142 aa13.07□□□□□ -0.32
Col17a1-202ENSMUST00000086923 Igkv12-89A0A0G2JGW8 112 aa13.06□□□□□ -0.32
Col17a1-202ENSMUST00000086923 Edn1P22387 202 aa13.06□□□□□ -0.32
Col17a1-202ENSMUST00000086923 Ighv1-23A0A0A6YVW3 117 aa13.06□□□□□ -0.32
Col17a1-202ENSMUST00000086923 Gm9920D3YVZ2 140 aa13.06□□□□□ -0.32
Col17a1-202ENSMUST00000086923 Ndufa1O35683 70 aa13.06□□□□□ -0.32
Col17a1-202ENSMUST00000086923 9430069I07RikQ9CX21 111 aa13.06□□□□□ -0.32
Col17a1-202ENSMUST00000086923 Gm17334Q8C6U3 126 aa13.06□□□□□ -0.32
Col17a1-202ENSMUST00000086923 Igkv13-85A0A075B666 115 aa13.06□□□□□ -0.32
Col17a1-202ENSMUST00000086923 Fer1l5P0DM40 2038 aa13.05□□□□□ -0.32
Col17a1-202ENSMUST00000086923 Ighv1-9A0A0A6YW37 117 aa13.05□□□□□ -0.32
Col17a1-202ENSMUST00000086923 Igkv6-32A0A140T8N9 115 aa13.05□□□□□ -0.32
Col17a1-202ENSMUST00000086923 Gm10251J3QPM5 127 aa13.05□□□□□ -0.32
Col17a1-202ENSMUST00000086923 CenpwQ3URR0 86 aa13.05□□□□□ -0.32
Col17a1-202ENSMUST00000086923 Tmem14cQ9CQN6 114 aa13.05□□□□□ -0.32
Col17a1-202ENSMUST00000086923 Morn5Q9DAI9 170 aa13.05□□□□□ -0.32
Col17a1-202ENSMUST00000086923 Tln2Q71LX4 2375 aa13.05□□□□□ -0.32
Col17a1-202ENSMUST00000086923 Dock3Q8CIQ7 2027 aa13.05□□□□□ -0.32
Col17a1-202ENSMUST00000086923 A0A1L1SR50 188 aa13.05□□□□□ -0.32
Col17a1-202ENSMUST00000086923 Ndufa12Q7TMF3 145 aaKnown RBP13.05□□□□□ -0.32
Col17a1-202ENSMUST00000086923 OtosQ8R448 89 aa13.05□□□□□ -0.32
Col17a1-202ENSMUST00000086923 Tpsg1Q9QUL7 311 aa13.05□□□□□ -0.32
Col17a1-202ENSMUST00000086923 Fhl3Q9R059 289 aa13.05□□□□□ -0.32
Col17a1-202ENSMUST00000086923 Gm20730A0A075B5J6 119 aa13.04□□□□□ -0.32
Col17a1-202ENSMUST00000086923 Gm4763Q8CFJ5 196 aa13.04□□□□□ -0.32
Col17a1-202ENSMUST00000086923 Igkv4-63A0A0G2JFU6 117 aa13.04□□□□□ -0.32
Col17a1-202ENSMUST00000086923 Glrp1E9Q9S8 174 aa13.04□□□□□ -0.32
Col17a1-202ENSMUST00000086923 Igkv20-101-2A0A0G2JDU3 113 aa13.04□□□□□ -0.32
Col17a1-202ENSMUST00000086923 Igkv4-59A0A0B4J1I8 117 aa13.03□□□□□ -0.32
Col17a1-202ENSMUST00000086923 Nbl1Q61477 178 aa13.03□□□□□ -0.32
Col17a1-202ENSMUST00000086923 Trav9d-4A0A0G2JG37 103 aa13.03□□□□□ -0.32
Col17a1-202ENSMUST00000086923 Igkv4-61A0A0G2JH00 117 aa13.02□□□□□ -0.32
Col17a1-202ENSMUST00000086923 Gm10384Q3UQ87 92 aa13.02□□□□□ -0.32
Col17a1-202ENSMUST00000086923 Gm10337F7DEP7 55 aa13.02□□□□□ -0.33
Col17a1-202ENSMUST00000086923 Egr1P08046 533 aa13.02□□□□□ -0.33
Col17a1-202ENSMUST00000086923 Pkd1l3Q2EG98 2201 aa13.02□□□□□ -0.33
Col17a1-202ENSMUST00000086923 Igkv4-54A0A0G2JES9 117 aa13.02□□□□□ -0.33
Col17a1-202ENSMUST00000086923 Iglv1A0A075B663 117 aa13.02□□□□□ -0.33
Col17a1-202ENSMUST00000086923 Vsig4F6TUL9 280 aa13.01□□□□□ -0.33
Col17a1-202ENSMUST00000086923 Dock9Q8BIK4 2055 aa13.01□□□□□ -0.33
Col17a1-202ENSMUST00000086923 Ighv1-69A0A0G2JFS5 117 aa13.01□□□□□ -0.33
Col17a1-202ENSMUST00000086923 Igkv4-58A0A0G2JGI6 119 aa13.01□□□□□ -0.33
Col17a1-202ENSMUST00000086923 Svs5P30933 122 aa13.01□□□□□ -0.33
Col17a1-202ENSMUST00000086923 Wdr38Q9D994 303 aa13.01□□□□□ -0.33
Col17a1-202ENSMUST00000086923 P01756 117 aa13.01□□□□□ -0.33
Col17a1-202ENSMUST00000086923 P01757 117 aa13.01□□□□□ -0.33
Col17a1-202ENSMUST00000086923 Ly6aP05533 134 aa13.01□□□□□ -0.33
Col17a1-202ENSMUST00000086923 Spsb3Q571F5 354 aa13.01□□□□□ -0.33
Col17a1-202ENSMUST00000086923 EpopQ7TNS8 369 aa13.01□□□□□ -0.33
Col17a1-202ENSMUST00000086923 4930447F04RikA2AFR2 126 aa13.01□□□□□ -0.33
Col17a1-202ENSMUST00000086923 ColqO35348 457 aa13.01□□□□□ -0.33
Col17a1-202ENSMUST00000086923 3110018I06RikQ9CXS0 120 aa13.01□□□□□ -0.33
Col17a1-202ENSMUST00000086923 Cfap46E9Q2C0 2641 aa13□□□□□ -0.33
Col17a1-202ENSMUST00000086923 Gm42674D3YUT9 64 aa13□□□□□ -0.33
Col17a1-202ENSMUST00000086923 AngP21570 145 aa13□□□□□ -0.33
Col17a1-202ENSMUST00000086923 Ank3G5E8K5 1961 aa13□□□□□ -0.33
Col17a1-202ENSMUST00000086923 Gpr179E9PY61 2293 aa13□□□□□ -0.33
Col17a1-202ENSMUST00000086923 Ighv1-39A0A075B5V5 117 aa13□□□□□ -0.33
Col17a1-202ENSMUST00000086923 CrebbpP45481 2441 aa13□□□□□ -0.33
Col17a1-202ENSMUST00000086923 Ighv1-80A0A075B5Y3 117 aa13□□□□□ -0.33
Col17a1-202ENSMUST00000086923 Igkv4-80A0A075B5L7 116 aa13□□□□□ -0.33
Col17a1-202ENSMUST00000086923 Igkv4-72A0A0B4J1I4 117 aa13□□□□□ -0.33
Col17a1-202ENSMUST00000086923 P01674 108 aa13□□□□□ -0.33
Col17a1-202ENSMUST00000086923 Folr2Q05685 251 aa12.99□□□□□ -0.33
Col17a1-202ENSMUST00000086923 P01812 117 aa12.99□□□□□ -0.33
Col17a1-202ENSMUST00000086923 Gm14137Q8CE97 175 aa12.99□□□□□ -0.33
Col17a1-202ENSMUST00000086923 Ighv1-37A0A0A6YW32 117 aa12.99□□□□□ -0.33
Col17a1-202ENSMUST00000086923 PemtQ61907 199 aa12.99□□□□□ -0.33
Col17a1-202ENSMUST00000086923 Rspo1Q9Z132 265 aa12.99□□□□□ -0.33
Col17a1-202ENSMUST00000086923 Odf3Q920N1 254 aa12.99□□□□□ -0.33
Col17a1-202ENSMUST00000086923 Lst1O08843 95 aa12.99□□□□□ -0.33
Col17a1-202ENSMUST00000086923 Igkv4-57A0A0A6YYE7 117 aa12.98□□□□□ -0.33
Col17a1-202ENSMUST00000086923 P01649 108 aa12.98□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 46.9 ms