RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Tcrg-V6A0A075B5Y8 134 aa14.06□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 Fhl1P97447 280 aaKnown RBP14.06□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 Map1lc3aQ91VR7 121 aa14.06□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 Ighv1-74A0A0G2JGK2 117 aa14.06□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 Gm16442D3YZG3 307 aa14.06□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 Tstd1E9PY03 133 aa14.06□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 Fmc1Q9CR13 113 aa14.06□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 LrbaQ9ESE1 2856 aa14.05□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 Atp5iQ06185 71 aaKnown RBP14.05□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 Crip3Q6Q6R3 243 aa14.05□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 Slc35d2Q762D5 326 aa14.05□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 Tex48Q9DA81 110 aa14.05□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 Wfdc2Q9DAU7 174 aa14.05□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 Gm28038F7BCN9 126 aa14.05□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 Tmem136Q3TYE7 245 aa14.05□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 Khdc1aQ3UWR2 166 aa14.05□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 Slc25a20Q9Z2Z6 301 aaKnown RBP14.05□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 Itpr3P70227 2670 aa14.04□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 Ighv1-53A0A075B5W3 117 aa14.04□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 MycbQ6P8Z1 170 aa14.04□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 Tm4sf20Q9CQY8 226 aa14.04□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 Ndufa11Q9D8B4 141 aa14.04□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 Ighv1-4A0A075B5T4 117 aa14.04□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 Ighv5-8A0A075B676 92 aa14.04□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 Josd1Q9DBJ6 202 aa14.04□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 Edn2P22389 175 aa14.03□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 Fxyd7P59648 80 aa14.03□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 Trav19A0A0B4J1K4 119 aa14.03□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 Gosr1O88630 250 aa14.03□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 P06330 118 aa14.03□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 Arhgap32Q811P8 2089 aa14.02□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 Socs3O35718 225 aa14.02□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 P01794 123 aa14.02□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 TgfaP48030 159 aa14.02□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 Pla2g2cP48076 150 aa14.02□□□□□ -0.16
Ccdc3-201ENSMUST00000027988 Igkv4-71A0A0G2JEH0 117 aa14.02□□□□□ -0.17
Ccdc3-201ENSMUST00000027988 Ighv1-62-3P01754 117 aa14.02□□□□□ -0.17
Ccdc3-201ENSMUST00000027988 Tcl1b4P56844 120 aa14.02□□□□□ -0.17
Ccdc3-201ENSMUST00000027988 Olfr322Q5NCC8 327 aa14.02□□□□□ -0.17
Ccdc3-201ENSMUST00000027988 Olfr317Q5NCD6 327 aa14.02□□□□□ -0.17
Ccdc3-201ENSMUST00000027988 Srsf2Q62093 221 aaKnown RBP14.02□□□□□ -0.17
Ccdc3-201ENSMUST00000027988 Gm16223Q8CBM3 117 aa14.02□□□□□ -0.17
Ccdc3-201ENSMUST00000027988 Vmn1r197Q8R265 298 aa14.02□□□□□ -0.17
Ccdc3-201ENSMUST00000027988 AhspQ9CY02 102 aa14.02□□□□□ -0.17
Ccdc3-201ENSMUST00000027988 Ighv1-23A0A0A6YVW3 117 aa14.01□□□□□ -0.17
Ccdc3-201ENSMUST00000027988 Tmem8bB1AWJ5 472 aa14.01□□□□□ -0.17
Ccdc3-201ENSMUST00000027988 LystP97412 3788 aa14.01□□□□□ -0.17
Ccdc3-201ENSMUST00000027988 Smim13E9Q942 88 aa14.01□□□□□ -0.17
Ccdc3-201ENSMUST00000027988 P01724 129 aa14.01□□□□□ -0.17
Ccdc3-201ENSMUST00000027988 P01727 129 aa14.01□□□□□ -0.17
Ccdc3-201ENSMUST00000027988 Prr23a3Q9CWP9 254 aa14.01□□□□□ -0.17
Ccdc3-201ENSMUST00000027988 Qrich2A0A140LIY9 2337 aa14□□□□□ -0.17
Ccdc3-201ENSMUST00000027988 Trav16d-dv11A0A075B617 117 aa14□□□□□ -0.17
Ccdc3-201ENSMUST00000027988 Cela2aP05208 271 aa14□□□□□ -0.17
Ccdc3-201ENSMUST00000027988 Odf1Q61999 247 aa14□□□□□ -0.17
Ccdc3-201ENSMUST00000027988 Ufc1Q9CR09 167 aa14□□□□□ -0.17
Ccdc3-201ENSMUST00000027988 Gm15557A6PWY0 234 aa14□□□□□ -0.17
Ccdc3-201ENSMUST00000027988 Ang5Q5GAN1 145 aa14□□□□□ -0.17
Ccdc3-201ENSMUST00000027988 Snx22Q8C084 192 aa14□□□□□ -0.17
Ccdc3-201ENSMUST00000027988 Ndufc2Q9CQ54 120 aa14□□□□□ -0.17
Ccdc3-201ENSMUST00000027988 OtorQ9JIE3 128 aa14□□□□□ -0.17
Ccdc3-201ENSMUST00000027988 Hspb8Q9JK92 196 aa14□□□□□ -0.17
Ccdc3-201ENSMUST00000027988 Ighv3-4A0A0A6YXF1 117 aa13.99□□□□□ -0.17
Ccdc3-201ENSMUST00000027988 Gm5878E9PUB3 99 aa13.99□□□□□ -0.17
Ccdc3-201ENSMUST00000027988 TshbP12656 138 aa13.99□□□□□ -0.17
Ccdc3-201ENSMUST00000027988 Fgf6P21658 208 aa13.99□□□□□ -0.17
Ccdc3-201ENSMUST00000027988 Gpx7Q99LJ6 186 aa13.99□□□□□ -0.17
Ccdc3-201ENSMUST00000027988 Sec11aQ9R0P6 179 aa13.99□□□□□ -0.17
Ccdc3-201ENSMUST00000027988 1700067P10RikG3X8U2 183 aa13.99□□□□□ -0.17
Ccdc3-201ENSMUST00000027988 Gpx1P11352 201 aa13.99□□□□□ -0.17
Ccdc3-201ENSMUST00000027988 Gm7489Q3UT34 171 aa13.99□□□□□ -0.17
Ccdc3-201ENSMUST00000027988 Taf15Q8BQ46 557 aaKnown RBP13.99□□□□□ -0.17
Ccdc3-201ENSMUST00000027988 Prr9Q8BV84 116 aa13.99□□□□□ -0.17
Ccdc3-201ENSMUST00000027988 Khdc1cQ4KL78 166 aa13.98□□□□□ -0.17
Ccdc3-201ENSMUST00000027988 Hspe1Q64433 102 aaKnown RBP13.98□□□□□ -0.17
Ccdc3-201ENSMUST00000027988 Hoxc12Q8K5B8 280 aa13.98□□□□□ -0.17
Ccdc3-201ENSMUST00000027988 Gm5464Q3UY29 175 aa13.98□□□□□ -0.17
Ccdc3-201ENSMUST00000027988 Spock3Q8BKV0 436 aa13.98□□□□□ -0.17
Ccdc3-201ENSMUST00000027988 Mcrip2Q9CQB2 160 aaKnown RBP13.98□□□□□ -0.17
Ccdc3-201ENSMUST00000027988 Olfr498Q8VEW2 330 aa13.98□□□□□ -0.17
Ccdc3-201ENSMUST00000027988 Igkv4-70A0A0B4J1I5 116 aa13.97□□□□□ -0.17
Ccdc3-201ENSMUST00000027988 Igkv20-101-2A0A0G2JDU3 113 aa13.97□□□□□ -0.17
Ccdc3-201ENSMUST00000027988 H2-DMb1P35737 261 aa13.97□□□□□ -0.17
Ccdc3-201ENSMUST00000027988 Zfp248Q640N4 576 aa13.97□□□□□ -0.17
Ccdc3-201ENSMUST00000027988 Snai3Q9QY31 287 aa13.96□□□□□ -0.17
Ccdc3-201ENSMUST00000027988 Igkv4-57-1A0A075B5M4 119 aa13.96□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 Defa13P50711 93 aa13.96□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 Q4KKZ1 196 aa13.96□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 Olfr311Q5NC59 308 aa13.96□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 Il22ra1Q80XZ4 581 aa13.96□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 PerpQ9JK95 193 aa13.96□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 Prpf8Q99PV0 2335 aaKnown RBP13.95□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 Gm12845A0A0N4SUM5 588 aa13.95□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 TcraP01849 138 aa13.95□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 Psmb11Q8BG41 302 aa13.95□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 Gm26938S4R185 226 aa13.95□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 P01820 115 aa13.95□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 Gng4P50153 75 aa13.95□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 PlnP61014 52 aa13.95□□□□□ -0.18
Ccdc3-201ENSMUST00000027988 Gkn1Q9CR36 201 aa13.95□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 343.6 ms