RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 SPTSSBQ8NFR3 76 aa9.07□□□□□ -0.96
PHGDH-209ENST00000641074 LINC01558Q9Y6Z2 57 aa9.07□□□□□ -0.96
PHGDH-209ENST00000641074 S4R3F8 94 aa9.07□□□□□ -0.96
PHGDH-209ENST00000641074 KRTAP3-3Q9BYR6 98 aa9.05□□□□□ -0.96
PHGDH-209ENST00000641074 PSPHP1O15172 72 aa9.03□□□□□ -0.96
PHGDH-209ENST00000641074 UBR4Q5T4S7 5183 aa9.03□□□□□ -0.96
PHGDH-209ENST00000641074 KRTAP19-2Q3LHN2 52 aa9.02□□□□□ -0.97
PHGDH-209ENST00000641074 PRR15LQ9BU68 103 aa9.01□□□□□ -0.97
PHGDH-209ENST00000641074 RNF213Q63HN8 5207 aa8.94□□□□□ -0.98
PHGDH-209ENST00000641074 Q5VV11 94 aa8.94□□□□□ -0.98
PHGDH-209ENST00000641074 SVIPQ8NHG7 77 aa8.93□□□□□ -0.98
PHGDH-209ENST00000641074 A0A1B0GU69 56 aa8.92□□□□□ -0.98
PHGDH-209ENST00000641074 CSAG1Q6PB30 78 aa8.86□□□□□ -0.99
PHGDH-209ENST00000641074 SEC61GP60059 68 aa8.85□□□□□ -0.99
PHGDH-209ENST00000641074 FLGP20930 4061 aaPredicted RBP8.81□□□□□ -1
PHGDH-209ENST00000641074 LCE2CQ5TA81 110 aa8.8□□□□□ -1
PHGDH-209ENST00000641074 KRTAP3-2Q9BYR7 98 aa8.73□□□□□ -1.01
PHGDH-209ENST00000641074 A6NED7 52 aa8.73□□□□□ -1.01
PHGDH-209ENST00000641074 FAT4Q6V0I7 4981 aa8.72□□□□□ -1.01
PHGDH-209ENST00000641074 KRTAP10-6P60371 365 aaPredicted RBP8.72□□□□□ -1.01
PHGDH-209ENST00000641074 ADM2Q7Z4H4 148 aa8.69□□□□□ -1.02
PHGDH-209ENST00000641074 A0A1B0GU33 70 aa8.66□□□□□ -1.02
PHGDH-209ENST00000641074 H0YAA0 97 aa8.66□□□□□ -1.02
PHGDH-209ENST00000641074 P0C880 135 aa8.66□□□□□ -1.02
PHGDH-209ENST00000641074 BRK1Q8WUW1 75 aa8.66□□□□□ -1.02
PHGDH-209ENST00000641074 UQCR11O14957 56 aa8.65□□□□□ -1.02
PHGDH-209ENST00000641074 PRO0628Q9UI54 55 aa8.63□□□□□ -1.03
PHGDH-209ENST00000641074 MT1HP80294 61 aa8.61□□□□□ -1.03
PHGDH-209ENST00000641074 A8MU10 97 aa8.6□□□□□ -1.03
PHGDH-209ENST00000641074 CDC42SE1Q9NRR8 79 aa8.57□□□□□ -1.04
PHGDH-209ENST00000641074 MIR22HGQ0VDD5 57 aa8.56□□□□□ -1.04
PHGDH-209ENST00000641074 SPATA8Q6RVD6 105 aa8.56□□□□□ -1.04
PHGDH-209ENST00000641074 M0R2T5 61 aa8.53□□□□□ -1.04
PHGDH-209ENST00000641074 KRTAP13-4Q3LI77 160 aa8.5□□□□□ -1.05
PHGDH-209ENST00000641074 LORP23490 312 aaPredicted RBP8.43□□□□□ -1.06
PHGDH-209ENST00000641074 M0QZ58 72 aa8.39□□□□□ -1.07
PHGDH-209ENST00000641074 R4GN34 69 aa8.36□□□□□ -1.07
PHGDH-209ENST00000641074 A0A0D9SG42 100 aa8.33□□□□□ -1.08
PHGDH-209ENST00000641074 KRTAP9-8Q9BYQ0 159 aa8.3□□□□□ -1.08
PHGDH-209ENST00000641074 MT2AP02795 61 aa8.28□□□□□ -1.08
PHGDH-209ENST00000641074 CRIPTQ9P021 101 aa8.26□□□□□ -1.09
PHGDH-209ENST00000641074 LCE2AQ5TA79 106 aaPredicted RBP8.25□□□□□ -1.09
PHGDH-209ENST00000641074 MT1FP04733 61 aa8.24□□□□□ -1.09
PHGDH-209ENST00000641074 LINC01554Q52M75 96 aa8.23□□□□□ -1.09
PHGDH-209ENST00000641074 KRTAP10-10P60014 251 aa8.21□□□□□ -1.1
PHGDH-209ENST00000641074 PMAIP1Q13794 54 aa8.18□□□□□ -1.1
PHGDH-209ENST00000641074 KRTAP12-1P59990 96 aa8.15□□□□□ -1.1
PHGDH-209ENST00000641074 KRTAP12-2P59991 146 aa8.15□□□□□ -1.1
PHGDH-209ENST00000641074 A6NN06 94 aa8.14□□□□□ -1.11
PHGDH-209ENST00000641074 K7ERS5 55 aa8.14□□□□□ -1.11
PHGDH-209ENST00000641074 SPINT4Q6UDR6 99 aa8.12□□□□□ -1.11
PHGDH-209ENST00000641074 KRTAP19-1Q8IUB9 90 aa8.11□□□□□ -1.11
PHGDH-209ENST00000641074 SPRR2GQ9BYE4 73 aa8.11□□□□□ -1.11
PHGDH-209ENST00000641074 KRTAP9-3Q9BYQ3 159 aa8□□□□□ -1.13
PHGDH-209ENST00000641074 KTN1-AS1Q86SY8 53 aa7.93□□□□□ -1.14
PHGDH-209ENST00000641074 KRTAP19-8Q3LI54 63 aa7.89□□□□□ -1.15
PHGDH-209ENST00000641074 ROMO1P60602 79 aa7.84□□□□□ -1.15
PHGDH-209ENST00000641074 CAMK2N1Q7Z7J9 78 aa7.84□□□□□ -1.15
PHGDH-209ENST00000641074 PLAC4Q8WY50 150 aa7.84□□□□□ -1.15
PHGDH-209ENST00000641074 MT1BP07438 61 aa7.8□□□□□ -1.16
PHGDH-209ENST00000641074 LCE2BO14633 110 aa7.78□□□□□ -1.16
PHGDH-209ENST00000641074 C10orf95Q9H7T3 257 aa7.73□□□□□ -1.17
PHGDH-209ENST00000641074 PRAC1Q96KF2 57 aa7.69□□□□□ -1.18
PHGDH-209ENST00000641074 USH2AO75445 5202 aa7.6□□□□□ -1.19
PHGDH-209ENST00000641074 MT1XP80297 61 aa7.56□□□□□ -1.2
PHGDH-209ENST00000641074 KRTAP10-5P60370 271 aa7.55□□□□□ -1.2
PHGDH-209ENST00000641074 KRTAP25-1Q3LHN0 102 aa7.48□□□□□ -1.21
PHGDH-209ENST00000641074 LCE2DQ5TA82 110 aaPredicted RBP7.46□□□□□ -1.22
PHGDH-209ENST00000641074 TNP1P09430 55 aa7.45□□□□□ -1.22
PHGDH-209ENST00000641074 PRO2289Q9P1D8 64 aa7.43□□□□□ -1.22
PHGDH-209ENST00000641074 KRTAP9-2Q9BYQ4 174 aa7.38□□□□□ -1.23
PHGDH-209ENST00000641074 SSPOA2VEC9 5147 aa7.35□□□□□ -1.23
PHGDH-209ENST00000641074 FSIP2Q5CZC0 6907 aa7.35□□□□□ -1.23
PHGDH-209ENST00000641074 KRTAP10-7P60409 375 aaPredicted RBP7.27□□□□□ -1.25
PHGDH-209ENST00000641074 KRTAP19-6Q3LI70 58 aa7.27□□□□□ -1.25
PHGDH-209ENST00000641074 PP632Q6XCG6 107 aa7.23□□□□□ -1.25
PHGDH-209ENST00000641074 KRTAP23-1A1A580 65 aa7.21□□□□□ -1.25
PHGDH-209ENST00000641074 KRTAP10-12P60413 245 aa7.16□□□□□ -1.26
PHGDH-209ENST00000641074 LCE3AQ5TA76 89 aa7.16□□□□□ -1.26
PHGDH-209ENST00000641074 FCGBPQ9Y6R7 5405 aaPredicted RBP7.03□□□□□ -1.28
PHGDH-209ENST00000641074 KMT2DO14686 5537 aa7.02□□□□□ -1.29
PHGDH-209ENST00000641074 CRCT1Q9UGL9 99 aa7.02□□□□□ -1.29
PHGDH-209ENST00000641074 KRTAP9-6A0A140TA67 174 aa7□□□□□ -1.29
PHGDH-209ENST00000641074 KRTAP8-1Q8IUC2 63 aa7□□□□□ -1.29
PHGDH-209ENST00000641074 KRTAP4-8A0A0G2JLE6 195 aa6.99□□□□□ -1.29
PHGDH-209ENST00000641074 KRTAP4-8Q9BYQ9 185 aa6.99□□□□□ -1.29
PHGDH-209ENST00000641074 KRTAP12-3P60328 96 aa6.87□□□□□ -1.31
PHGDH-209ENST00000641074 KRTAP19-5Q3LI72 72 aa6.84□□□□□ -1.31
PHGDH-209ENST00000641074 KRTAP19-7Q3SYF9 63 aa6.74□□□□□ -1.33
PHGDH-209ENST00000641074 KRTAP15-1Q3LI76 137 aa6.73□□□□□ -1.33
PHGDH-209ENST00000641074 MACF1Q9UPN3 7388 aaKnown RBP6.72□□□□□ -1.33
PHGDH-209ENST00000641074 MT1EP04732 61 aa6.62□□□□□ -1.35
PHGDH-209ENST00000641074 SYNE2Q8WXH0 6885 aaKnown RBP6.56□□□□□ -1.36
PHGDH-209ENST00000641074 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.52□□□□□ -1.37
PHGDH-209ENST00000641074 MT1LQ93083 61 aa6.49□□□□□ -1.37
PHGDH-209ENST00000641074 SPRR2FQ96RM1 72 aa6.47□□□□□ -1.37
PHGDH-209ENST00000641074 MUC12Q9UKN1 5478 aa6.47□□□□□ -1.37
PHGDH-209ENST00000641074 SPRR5A0A1B0GTR4 108 aa6.44□□□□□ -1.38
PHGDH-209ENST00000641074 LCE3CQ5T5A8 94 aa6.42□□□□□ -1.38
PHGDH-209ENST00000641074 KRTAP5-9P26371 169 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms