RNA–Protein interactions for RNA: ENST00000640298.1

RHOXF1P3-203, Transcript of Rhox homeobox family member 1 pseudogene 3, humanhuman

TSL 5 BASIC

Gene RHOXF1P3, Length 2,668 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF1P3-203ENST00000640298 TNXBP22105 4242 aa8.05□□□□□ -1.12
RHOXF1P3-203ENST00000640298 KRTAP17-1Q9BYP8 105 aa8.03□□□□□ -1.12
RHOXF1P3-203ENST00000640298 FAT3Q8TDW7 4589 aa8.02□□□□□ -1.13
RHOXF1P3-203ENST00000640298 KRTAP10-8P60410 259 aa8.01□□□□□ -1.13
RHOXF1P3-203ENST00000640298 EPPK1P58107 5090 aaKnown RBP8□□□□□ -1.13
RHOXF1P3-203ENST00000640298 KRTAP3-3Q9BYR6 98 aa7.97□□□□□ -1.13
RHOXF1P3-203ENST00000640298 RPL37P61927 97 aaKnown RBP7.97□□□□□ -1.13
RHOXF1P3-203ENST00000640298 K7ERS5 55 aa7.96□□□□□ -1.14
RHOXF1P3-203ENST00000640298 KRTAP25-1Q3LHN0 102 aa7.96□□□□□ -1.14
RHOXF1P3-203ENST00000640298 MYCBP2O75592 4640 aa7.96□□□□□ -1.14
RHOXF1P3-203ENST00000640298 KRTAP10-6P60371 365 aaPredicted RBP7.94□□□□□ -1.14
RHOXF1P3-203ENST00000640298 DMBT1Q9UGM3 2413 aaPredicted RBP7.93□□□□□ -1.14
RHOXF1P3-203ENST00000640298 XP32Q5T750 250 aa7.91□□□□□ -1.14
RHOXF1P3-203ENST00000640298 KRTAP3-2Q9BYR7 98 aa7.88□□□□□ -1.15
RHOXF1P3-203ENST00000640298 S4R3F8 94 aa7.85□□□□□ -1.15
RHOXF1P3-203ENST00000640298 KRTAP13-4Q3LI77 160 aa7.85□□□□□ -1.15
RHOXF1P3-203ENST00000640298 MT1HL1P0DM35 61 aa7.83□□□□□ -1.16
RHOXF1P3-203ENST00000640298 ROMO1P60602 79 aa7.8□□□□□ -1.16
RHOXF1P3-203ENST00000640298 A0A0D9SG42 100 aa7.75□□□□□ -1.17
RHOXF1P3-203ENST00000640298 CRIPTQ9P021 101 aa7.75□□□□□ -1.17
RHOXF1P3-203ENST00000640298 P0C880 135 aa7.75□□□□□ -1.17
RHOXF1P3-203ENST00000640298 KRTAP4-5Q9BYR2 181 aa7.73□□□□□ -1.17
RHOXF1P3-203ENST00000640298 ABCA13Q86UQ4 5058 aa7.64□□□□□ -1.19
RHOXF1P3-203ENST00000640298 KRTAP12-2P59991 146 aa7.6□□□□□ -1.19
RHOXF1P3-203ENST00000640298 TPRXLQ17RH7 258 aa7.6□□□□□ -1.19
RHOXF1P3-203ENST00000640298 LPAP08519 4548 aa7.58□□□□□ -1.2
RHOXF1P3-203ENST00000640298 LRP2P98164 4655 aa7.58□□□□□ -1.2
RHOXF1P3-203ENST00000640298 KRTAP12-1P59990 96 aa7.56□□□□□ -1.2
RHOXF1P3-203ENST00000640298 HERC2O95714 4834 aa7.54□□□□□ -1.2
RHOXF1P3-203ENST00000640298 M0QZ58 72 aa7.53□□□□□ -1.2
RHOXF1P3-203ENST00000640298 H3BS24 57 aa7.53□□□□□ -1.2
RHOXF1P3-203ENST00000640298 SPINT4Q6UDR6 99 aa7.49□□□□□ -1.21
RHOXF1P3-203ENST00000640298 C10orf95Q9H7T3 257 aa7.49□□□□□ -1.21
RHOXF1P3-203ENST00000640298 BIRC6Q9NR09 4857 aa7.48□□□□□ -1.21
RHOXF1P3-203ENST00000640298 J3QL48 77 aa7.46□□□□□ -1.21
RHOXF1P3-203ENST00000640298 R4GN34 69 aa7.3□□□□□ -1.24
RHOXF1P3-203ENST00000640298 SEC61BP60468 96 aaKnown RBP7.28□□□□□ -1.24
RHOXF1P3-203ENST00000640298 KRTAP15-1Q3LI76 137 aa7.28□□□□□ -1.24
RHOXF1P3-203ENST00000640298 PCLOQ9Y6V0 5065 aa7.24□□□□□ -1.25
RHOXF1P3-203ENST00000640298 MUC17Q685J3 4493 aa7.22□□□□□ -1.25
RHOXF1P3-203ENST00000640298 HERC1Q15751 4861 aa7.2□□□□□ -1.26
RHOXF1P3-203ENST00000640298 KRTAP4-1Q9BYQ7 146 aa7.2□□□□□ -1.26
RHOXF1P3-203ENST00000640298 LORP23490 312 aaPredicted RBP7.19□□□□□ -1.26
RHOXF1P3-203ENST00000640298 KRTAP19-2Q3LHN2 52 aa7.12□□□□□ -1.27
RHOXF1P3-203ENST00000640298 MUC2Q02817 5179 aa7.11□□□□□ -1.27
RHOXF1P3-203ENST00000640298 HMCN2Q8NDA2 5059 aa7.09□□□□□ -1.27
RHOXF1P3-203ENST00000640298 NDUFAF8A1L188 74 aa7.09□□□□□ -1.27
RHOXF1P3-203ENST00000640298 CAMK2N1Q7Z7J9 78 aa6.93□□□□□ -1.3
RHOXF1P3-203ENST00000640298 PLAC4Q8WY50 150 aa6.93□□□□□ -1.3
RHOXF1P3-203ENST00000640298 PP632Q6XCG6 107 aa6.91□□□□□ -1.3
RHOXF1P3-203ENST00000640298 FLGP20930 4061 aaPredicted RBP6.9□□□□□ -1.31
RHOXF1P3-203ENST00000640298 UBR4Q5T4S7 5183 aa6.82□□□□□ -1.32
RHOXF1P3-203ENST00000640298 FAT4Q6V0I7 4981 aa6.8□□□□□ -1.32
RHOXF1P3-203ENST00000640298 RNF213Q63HN8 5207 aa6.77□□□□□ -1.33
RHOXF1P3-203ENST00000640298 LCE2CQ5TA81 110 aa6.73□□□□□ -1.33
RHOXF1P3-203ENST00000640298 TNP1P09430 55 aa6.7□□□□□ -1.34
RHOXF1P3-203ENST00000640298 KRTAP23-1A1A580 65 aa6.7□□□□□ -1.34
RHOXF1P3-203ENST00000640298 LUZP6Q538Z0 58 aa6.62□□□□□ -1.35
RHOXF1P3-203ENST00000640298 SPRR2GQ9BYE4 73 aa6.6□□□□□ -1.35
RHOXF1P3-203ENST00000640298 M0R2T5 61 aa6.59□□□□□ -1.35
RHOXF1P3-203ENST00000640298 MT1HP80294 61 aa6.58□□□□□ -1.36
RHOXF1P3-203ENST00000640298 KRTAP19-1Q8IUB9 90 aa6.54□□□□□ -1.36
RHOXF1P3-203ENST00000640298 SPRR5A0A1B0GTR4 108 aa6.49□□□□□ -1.37
RHOXF1P3-203ENST00000640298 MT2AP02795 61 aa6.39□□□□□ -1.39
RHOXF1P3-203ENST00000640298 MT1FP04733 61 aa6.39□□□□□ -1.39
RHOXF1P3-203ENST00000640298 KRTAP10-10P60014 251 aa6.37□□□□□ -1.39
RHOXF1P3-203ENST00000640298 KRTAP9-8Q9BYQ0 159 aa6.37□□□□□ -1.39
RHOXF1P3-203ENST00000640298 A0A0A0MQY5 61 aa6.32□□□□□ -1.4
RHOXF1P3-203ENST00000640298 LCE3AQ5TA76 89 aa6.32□□□□□ -1.4
RHOXF1P3-203ENST00000640298 KRTAP19-8Q3LI54 63 aa6.29□□□□□ -1.4
RHOXF1P3-203ENST00000640298 KRTAP8-1Q8IUC2 63 aa6.21□□□□□ -1.42
RHOXF1P3-203ENST00000640298 MT1BP07438 61 aa6.19□□□□□ -1.42
RHOXF1P3-203ENST00000640298 KRTAP10-5P60370 271 aa6.18□□□□□ -1.42
RHOXF1P3-203ENST00000640298 MT1XP80297 61 aa6.16□□□□□ -1.42
RHOXF1P3-203ENST00000640298 KRTAP9-3Q9BYQ3 159 aa6.12□□□□□ -1.43
RHOXF1P3-203ENST00000640298 KRTAP10-12P60413 245 aa6.06□□□□□ -1.44
RHOXF1P3-203ENST00000640298 LCE2AQ5TA79 106 aaPredicted RBP6.05□□□□□ -1.44
RHOXF1P3-203ENST00000640298 KRTAP12-3P60328 96 aa6.03□□□□□ -1.44
RHOXF1P3-203ENST00000640298 KRTAP10-7P60409 375 aaPredicted RBP5.98□□□□□ -1.45
RHOXF1P3-203ENST00000640298 LCE2BO14633 110 aa5.93□□□□□ -1.46
RHOXF1P3-203ENST00000640298 PRO2289Q9P1D8 64 aa5.92□□□□□ -1.46
RHOXF1P3-203ENST00000640298 USH2AO75445 5202 aa5.91□□□□□ -1.46
RHOXF1P3-203ENST00000640298 INE1O15225 51 aa5.75□□□□□ -1.49
RHOXF1P3-203ENST00000640298 KRTAP19-5Q3LI72 72 aa5.74□□□□□ -1.49
RHOXF1P3-203ENST00000640298 LCE3CQ5T5A8 94 aa5.69□□□□□ -1.5
RHOXF1P3-203ENST00000640298 KMT2DO14686 5537 aa5.63□□□□□ -1.51
RHOXF1P3-203ENST00000640298 KRTAP4-8A0A0G2JLE6 195 aa5.58□□□□□ -1.52
RHOXF1P3-203ENST00000640298 KRTAP4-8Q9BYQ9 185 aa5.58□□□□□ -1.52
RHOXF1P3-203ENST00000640298 SSPOA2VEC9 5147 aa5.56□□□□□ -1.52
RHOXF1P3-203ENST00000640298 FSIP2Q5CZC0 6907 aa5.53□□□□□ -1.52
RHOXF1P3-203ENST00000640298 KRTAP19-7Q3SYF9 63 aa5.5□□□□□ -1.53
RHOXF1P3-203ENST00000640298 KRTAP9-6A8MVA2 160 aa5.49□□□□□ -1.53
RHOXF1P3-203ENST00000640298 KRTAP19-4Q3LI73 84 aa5.43□□□□□ -1.54
RHOXF1P3-203ENST00000640298 KRTAP19-6Q3LI70 58 aa5.41□□□□□ -1.54
RHOXF1P3-203ENST00000640298 KRTAP4-7Q9BYR0 210 aa5.37□□□□□ -1.55
RHOXF1P3-203ENST00000640298 KRTAP2-3P0C7H8 128 aa5.35□□□□□ -1.55
RHOXF1P3-203ENST00000640298 KRTAP2-4Q9BYR9 128 aa5.35□□□□□ -1.55
RHOXF1P3-203ENST00000640298 KRTAP2-1Q9BYU5 128 aa5.35□□□□□ -1.55
RHOXF1P3-203ENST00000640298 MT1LQ93083 61 aa5.34□□□□□ -1.55
RHOXF1P3-203ENST00000640298 MT1EP04732 61 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms