RNA–Protein interactions for RNA: ENST00000638443.1

ATM-226, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 2,146 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-226ENST00000638443 SPTSSBQ8NFR3 76 aa5.39□□□□□ -1.55
ATM-226ENST00000638443 H3BPC8 53 aa5.39□□□□□ -1.55
ATM-226ENST00000638443 HERC2O95714 4834 aa5.38□□□□□ -1.55
ATM-226ENST00000638443 CYP4F30PQ9H0H9 118 aa5.34□□□□□ -1.55
ATM-226ENST00000638443 LPAP08519 4548 aa5.34□□□□□ -1.56
ATM-226ENST00000638443 IGKV2D-30A0A075B6S6 120 aa5.33□□□□□ -1.56
ATM-226ENST00000638443 LOC101927531A0A1B0GV80 90 aa5.33□□□□□ -1.56
ATM-226ENST00000638443 IGKV2-30P06310 120 aa5.33□□□□□ -1.56
ATM-226ENST00000638443 C20orf166-AS1Q96NR2 134 aa5.33□□□□□ -1.56
ATM-226ENST00000638443 A8MU10 97 aa5.33□□□□□ -1.56
ATM-226ENST00000638443 P0C880 135 aa5.3□□□□□ -1.56
ATM-226ENST00000638443 SPANXA2-OT1Q8N9U9 137 aa5.29□□□□□ -1.56
ATM-226ENST00000638443 HRES1P13985 223 aa5.28□□□□□ -1.56
ATM-226ENST00000638443 XP32Q5T750 250 aa5.27□□□□□ -1.57
ATM-226ENST00000638443 LRP2P98164 4655 aa5.26□□□□□ -1.57
ATM-226ENST00000638443 CDC42SE1Q9NRR8 79 aa5.25□□□□□ -1.57
ATM-226ENST00000638443 MIR22HGQ0VDD5 57 aa5.24□□□□□ -1.57
ATM-226ENST00000638443 RPL37P61927 97 aaKnown RBP5.22□□□□□ -1.57
ATM-226ENST00000638443 Q5VV11 94 aa5.22□□□□□ -1.57
ATM-226ENST00000638443 COA5Q86WW8 74 aa5.22□□□□□ -1.57
ATM-226ENST00000638443 SPINK7P58062 85 aa5.2□□□□□ -1.58
ATM-226ENST00000638443 PCLOQ9Y6V0 5065 aa5.2□□□□□ -1.58
ATM-226ENST00000638443 TPRXLQ17RH7 258 aa5.18□□□□□ -1.58
ATM-226ENST00000638443 DMAC1Q96GE9 116 aa5.18□□□□□ -1.58
ATM-226ENST00000638443 NDUFAF8A1L188 74 aa5.16□□□□□ -1.58
ATM-226ENST00000638443 HERC1Q15751 4861 aa5.15□□□□□ -1.58
ATM-226ENST00000638443 CHKB-CPT1BH3BT56 60 aa5.14□□□□□ -1.59
ATM-226ENST00000638443 ACYP2P14621 99 aa5.12□□□□□ -1.59
ATM-226ENST00000638443 A0A1B0GU33 70 aa5.09□□□□□ -1.59
ATM-226ENST00000638443 CSAG1Q6PB30 78 aa5.09□□□□□ -1.59
ATM-226ENST00000638443 KRTAP25-1Q3LHN0 102 aa5.08□□□□□ -1.6
ATM-226ENST00000638443 HMCN2Q8NDA2 5059 aa5.05□□□□□ -1.6
ATM-226ENST00000638443 COX6B2Q6YFQ2 88 aa5.05□□□□□ -1.6
ATM-226ENST00000638443 MUC17Q685J3 4493 aa5.03□□□□□ -1.6
ATM-226ENST00000638443 KRTAP4-1Q9BYQ7 146 aa5.02□□□□□ -1.61
ATM-226ENST00000638443 KRTAP19-4Q3LI73 84 aa5.01□□□□□ -1.61
ATM-226ENST00000638443 PRR15LQ9BU68 103 aa5.01□□□□□ -1.61
ATM-226ENST00000638443 MUC2Q02817 5179 aa5□□□□□ -1.61
ATM-226ENST00000638443 LOC100996750A0A140TA64 210 aa4.99□□□□□ -1.61
ATM-226ENST00000638443 KRTAP4-6Q9BYQ5 205 aa4.99□□□□□ -1.61
ATM-226ENST00000638443 LINC01558Q9Y6Z2 57 aa4.98□□□□□ -1.61
ATM-226ENST00000638443 KRTAP15-1Q3LI76 137 aa4.96□□□□□ -1.62
ATM-226ENST00000638443 A0A1B0GU69 56 aa4.9□□□□□ -1.62
ATM-226ENST00000638443 S4R3F8 94 aa4.9□□□□□ -1.62
ATM-226ENST00000638443 H1FX-AS1Q4G0G2 97 aa4.89□□□□□ -1.63
ATM-226ENST00000638443 R4GN34 69 aa4.88□□□□□ -1.63
ATM-226ENST00000638443 UBR4Q5T4S7 5183 aa4.86□□□□□ -1.63
ATM-226ENST00000638443 KRTAP19-2Q3LHN2 52 aa4.85□□□□□ -1.63
ATM-226ENST00000638443 PRO2289Q9P1D8 64 aa4.81□□□□□ -1.64
ATM-226ENST00000638443 FAT4Q6V0I7 4981 aa4.81□□□□□ -1.64
ATM-226ENST00000638443 LCE4AQ5TA78 99 aa4.8□□□□□ -1.64
ATM-226ENST00000638443 RNF213Q63HN8 5207 aa4.79□□□□□ -1.64
ATM-226ENST00000638443 KRTAP9-6A0A140TA67 174 aa4.79□□□□□ -1.64
ATM-226ENST00000638443 KRTAP9-7A8MTY7 169 aa4.79□□□□□ -1.64
ATM-226ENST00000638443 KRTAP10-6P60371 365 aaPredicted RBP4.77□□□□□ -1.65
ATM-226ENST00000638443 FLGP20930 4061 aaPredicted RBP4.75□□□□□ -1.65
ATM-226ENST00000638443 UQCR11O14957 56 aa4.74□□□□□ -1.65
ATM-226ENST00000638443 H0YAA0 97 aa4.73□□□□□ -1.65
ATM-226ENST00000638443 SPATA8Q6RVD6 105 aa4.73□□□□□ -1.65
ATM-226ENST00000638443 KRTAP19-1Q8IUB9 90 aa4.73□□□□□ -1.65
ATM-226ENST00000638443 KRTAP9-4Q9BYQ2 154 aa4.72□□□□□ -1.65
ATM-226ENST00000638443 SPINT4Q6UDR6 99 aa4.72□□□□□ -1.65
ATM-226ENST00000638443 KRTAP13-4Q3LI77 160 aa4.71□□□□□ -1.66
ATM-226ENST00000638443 KRTAP9-9Q9BYP9 154 aa4.69□□□□□ -1.66
ATM-226ENST00000638443 A0A0D9SG42 100 aa4.61□□□□□ -1.67
ATM-226ENST00000638443 MT1HP80294 61 aa4.6□□□□□ -1.67
ATM-226ENST00000638443 KRTAP4-12Q9BQ66 201 aa4.55□□□□□ -1.68
ATM-226ENST00000638443 M0QZ58 72 aa4.55□□□□□ -1.68
ATM-226ENST00000638443 M0R2T5 61 aa4.55□□□□□ -1.68
ATM-226ENST00000638443 KRTAP12-2P59991 146 aa4.51□□□□□ -1.69
ATM-226ENST00000638443 KRTAP9-3Q9BYQ3 159 aa4.49□□□□□ -1.69
ATM-226ENST00000638443 LCE5AQ5TCM9 118 aa4.49□□□□□ -1.69
ATM-226ENST00000638443 KRTAP12-1P59990 96 aa4.48□□□□□ -1.69
ATM-226ENST00000638443 MT2AP02795 61 aa4.44□□□□□ -1.7
ATM-226ENST00000638443 MT1FP04733 61 aa4.44□□□□□ -1.7
ATM-226ENST00000638443 KRTAP9-8Q9BYQ0 159 aa4.44□□□□□ -1.7
ATM-226ENST00000638443 KRTAP4-8Q9BYQ9 185 aa4.44□□□□□ -1.7
ATM-226ENST00000638443 KRTAP9-2Q9BYQ4 174 aa4.4□□□□□ -1.7
ATM-226ENST00000638443 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.39□□□□□ -1.71
ATM-226ENST00000638443 KRTAP10-10P60014 251 aa4.39□□□□□ -1.71
ATM-226ENST00000638443 CRIPTQ9P021 101 aa4.34□□□□□ -1.71
ATM-226ENST00000638443 SPRR2GQ9BYE4 73 aa4.33□□□□□ -1.72
ATM-226ENST00000638443 INE1O15225 51 aa4.3□□□□□ -1.72
ATM-226ENST00000638443 LCE3BQ5TA77 95 aa4.27□□□□□ -1.73
ATM-226ENST00000638443 C10orf95Q9H7T3 257 aa4.24□□□□□ -1.73
ATM-226ENST00000638443 MT1BP07438 61 aa4.21□□□□□ -1.74
ATM-226ENST00000638443 KRTAP19-8Q3LI54 63 aa4.19□□□□□ -1.74
ATM-226ENST00000638443 PLAC4Q8WY50 150 aa4.18□□□□□ -1.74
ATM-226ENST00000638443 USH2AO75445 5202 aa4.17□□□□□ -1.74
ATM-226ENST00000638443 KRTAP2-2Q9BYT5 123 aa4.12□□□□□ -1.75
ATM-226ENST00000638443 KRTAP4-8A0A0G2JLE6 195 aa4.09□□□□□ -1.75
ATM-226ENST00000638443 MT1XP80297 61 aa4.09□□□□□ -1.76
ATM-226ENST00000638443 KRTAP10-5P60370 271 aa4.08□□□□□ -1.76
ATM-226ENST00000638443 LCE1AQ5T7P2 110 aa4.03□□□□□ -1.76
ATM-226ENST00000638443 TNP1P09430 55 aa4.02□□□□□ -1.77
ATM-226ENST00000638443 LCE1FQ5T754 118 aa4.01□□□□□ -1.77
ATM-226ENST00000638443 KRTAP4-7Q9BYR0 210 aa4.01□□□□□ -1.77
ATM-226ENST00000638443 FSIP2Q5CZC0 6907 aa3.99□□□□□ -1.77
ATM-226ENST00000638443 LCE1DQ5T752 114 aa3.98□□□□□ -1.77
ATM-226ENST00000638443 PP632Q6XCG6 107 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms