RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 Q75L30 129 aa4.05□□□□□ -1.76
PNKP-229ENST00000637897 SMIM26A0A096LP01 95 aa4.03□□□□□ -1.76
PNKP-229ENST00000637897 A8MUU9 505 aa4.02□□□□□ -1.77
PNKP-229ENST00000637897 IGKV2-30P06310 120 aa4.02□□□□□ -1.77
PNKP-229ENST00000637897 C20orf166-AS1Q96NR2 134 aa4.02□□□□□ -1.77
PNKP-229ENST00000637897 KRTAP9-8Q9BYQ0 159 aa4.02□□□□□ -1.77
PNKP-229ENST00000637897 USH2AO75445 5202 aa4.02□□□□□ -1.77
PNKP-229ENST00000637897 FCGBPQ9Y6R7 5405 aaPredicted RBP3.99□□□□□ -1.77
PNKP-229ENST00000637897 SSPOA2VEC9 5147 aa3.99□□□□□ -1.77
PNKP-229ENST00000637897 COX6B2Q6YFQ2 88 aa3.98□□□□□ -1.77
PNKP-229ENST00000637897 IGKV2D-30A0A075B6S6 120 aa3.97□□□□□ -1.77
PNKP-229ENST00000637897 M0R2T5 61 aa3.97□□□□□ -1.77
PNKP-229ENST00000637897 HRES1P13985 223 aa3.97□□□□□ -1.77
PNKP-229ENST00000637897 C7orf65Q6ZTY9 151 aa3.97□□□□□ -1.77
PNKP-229ENST00000637897 MACF1Q9UPN3 7388 aaKnown RBP3.97□□□□□ -1.77
PNKP-229ENST00000637897 ATP11AUNQ6ZP68 121 aa3.96□□□□□ -1.78
PNKP-229ENST00000637897 COA5Q86WW8 74 aa3.96□□□□□ -1.78
PNKP-229ENST00000637897 MPLKIPQ8TAP9 179 aa3.96□□□□□ -1.78
PNKP-229ENST00000637897 ACYP2P14621 99 aa3.95□□□□□ -1.78
PNKP-229ENST00000637897 DMAC1Q96GE9 116 aa3.94□□□□□ -1.78
PNKP-229ENST00000637897 V9GYY9 64 aa3.94□□□□□ -1.78
PNKP-229ENST00000637897 Q1T7F1 81 aa3.93□□□□□ -1.78
PNKP-229ENST00000637897 MT2AP02795 61 aa3.92□□□□□ -1.78
PNKP-229ENST00000637897 SEC61GP60059 68 aa3.92□□□□□ -1.78
PNKP-229ENST00000637897 MT1FP04733 61 aa3.91□□□□□ -1.78
PNKP-229ENST00000637897 A8MUN3 132 aa3.9□□□□□ -1.79
PNKP-229ENST00000637897 C4orf26Q17RF5 130 aa3.9□□□□□ -1.79
PNKP-229ENST00000637897 CHKB-CPT1BH3BT56 60 aa3.89□□□□□ -1.79
PNKP-229ENST00000637897 SPINK7P58062 85 aa3.89□□□□□ -1.79
PNKP-229ENST00000637897 KRTAP9-3Q9BYQ3 159 aa3.89□□□□□ -1.79
PNKP-229ENST00000637897 NEBP20929 6669 aa3.87□□□□□ -1.79
PNKP-229ENST00000637897 LINC01558Q9Y6Z2 57 aa3.84□□□□□ -1.79
PNKP-229ENST00000637897 PSPHP1O15172 72 aa3.82□□□□□ -1.8
PNKP-229ENST00000637897 KRTAP19-1Q8IUB9 90 aa3.82□□□□□ -1.8
PNKP-229ENST00000637897 SPTSSBQ8NFR3 76 aa3.82□□□□□ -1.8
PNKP-229ENST00000637897 PRR15LQ9BU68 103 aa3.82□□□□□ -1.8
PNKP-229ENST00000637897 Q5VV11 94 aa3.79□□□□□ -1.8
PNKP-229ENST00000637897 KRTAP3-1Q9BYR8 98 aa3.78□□□□□ -1.8
PNKP-229ENST00000637897 KRTAP10-10P60014 251 aa3.77□□□□□ -1.81
PNKP-229ENST00000637897 RBM12B-AS1Q9P1G2 102 aa3.77□□□□□ -1.81
PNKP-229ENST00000637897 MUC12Q9UKN1 5478 aa3.77□□□□□ -1.81
PNKP-229ENST00000637897 A0A0A0MQY5 61 aa3.76□□□□□ -1.81
PNKP-229ENST00000637897 A0A1B0GU69 56 aa3.76□□□□□ -1.81
PNKP-229ENST00000637897 BRK1Q8WUW1 75 aa3.75□□□□□ -1.81
PNKP-229ENST00000637897 PRO0628Q9UI54 55 aa3.74□□□□□ -1.81
PNKP-229ENST00000637897 A6NED7 52 aa3.73□□□□□ -1.81
PNKP-229ENST00000637897 KRTAP19-6Q3LI70 58 aa3.72□□□□□ -1.81
PNKP-229ENST00000637897 KRTAP20-1Q3LI63 56 aa3.7□□□□□ -1.82
PNKP-229ENST00000637897 KRTAP6-3Q3LI67 103 aa3.7□□□□□ -1.82
PNKP-229ENST00000637897 H1FX-AS1Q4G0G2 97 aa3.7□□□□□ -1.82
PNKP-229ENST00000637897 S4R3F8 94 aa3.69□□□□□ -1.82
PNKP-229ENST00000637897 CDC42SE1Q9NRR8 79 aa3.68□□□□□ -1.82
PNKP-229ENST00000637897 UQCR11O14957 56 aa3.67□□□□□ -1.82
PNKP-229ENST00000637897 LCA10Q71F78 164 aa3.67□□□□□ -1.82
PNKP-229ENST00000637897 SPATA8Q6RVD6 105 aa3.63□□□□□ -1.83
PNKP-229ENST00000637897 MIR22HGQ0VDD5 57 aa3.62□□□□□ -1.83
PNKP-229ENST00000637897 A0A1B0GU33 70 aa3.61□□□□□ -1.83
PNKP-229ENST00000637897 CSAG1Q6PB30 78 aa3.61□□□□□ -1.83
PNKP-229ENST00000637897 KRTAP23-1A1A580 65 aa3.6□□□□□ -1.83
PNKP-229ENST00000637897 A8MU10 97 aa3.6□□□□□ -1.83
PNKP-229ENST00000637897 MDN1Q9NU22 5596 aa3.6□□□□□ -1.83
PNKP-229ENST00000637897 MT1BP07438 61 aa3.59□□□□□ -1.83
PNKP-229ENST00000637897 KMT2DO14686 5537 aa3.57□□□□□ -1.84
PNKP-229ENST00000637897 GPR98Q8WXG9 6306 aa3.57□□□□□ -1.84
PNKP-229ENST00000637897 H0YAA0 97 aa3.56□□□□□ -1.84
PNKP-229ENST00000637897 PMAIP1Q13794 54 aa3.56□□□□□ -1.84
PNKP-229ENST00000637897 KRTAP19-8Q3LI54 63 aa3.53□□□□□ -1.84
PNKP-229ENST00000637897 ADM2Q7Z4H4 148 aa3.53□□□□□ -1.84
PNKP-229ENST00000637897 SPRR2GQ9BYE4 73 aa3.52□□□□□ -1.85
PNKP-229ENST00000637897 A6NN06 94 aa3.51□□□□□ -1.85
PNKP-229ENST00000637897 P0C880 135 aa3.5□□□□□ -1.85
PNKP-229ENST00000637897 K7ERS5 55 aa3.48□□□□□ -1.85
PNKP-229ENST00000637897 M0QZ58 72 aa3.48□□□□□ -1.85
PNKP-229ENST00000637897 KRTAP10-5P60370 271 aa3.46□□□□□ -1.86
PNKP-229ENST00000637897 KRTAP13-4Q3LI77 160 aa3.45□□□□□ -1.86
PNKP-229ENST00000637897 KTN1-AS1Q86SY8 53 aa3.45□□□□□ -1.86
PNKP-229ENST00000637897 KRTAP2-3P0C7H8 128 aa3.44□□□□□ -1.86
PNKP-229ENST00000637897 KRTAP2-4Q9BYR9 128 aa3.44□□□□□ -1.86
PNKP-229ENST00000637897 A0A0D9SG42 100 aa3.41□□□□□ -1.86
PNKP-229ENST00000637897 R4GN34 69 aa3.41□□□□□ -1.86
PNKP-229ENST00000637897 KRTAP5-9P26371 169 aa3.4□□□□□ -1.87
PNKP-229ENST00000637897 CRIPTQ9P021 101 aa3.38□□□□□ -1.87
PNKP-229ENST00000637897 KRTAP12-1P59990 96 aa3.36□□□□□ -1.87
PNKP-229ENST00000637897 KRTAP12-2P59991 146 aa3.34□□□□□ -1.87
PNKP-229ENST00000637897 SPINT4Q6UDR6 99 aa3.34□□□□□ -1.87
PNKP-229ENST00000637897 MT1XP80297 61 aa3.33□□□□□ -1.88
PNKP-229ENST00000637897 KRTAP19-4Q3LI73 84 aa3.33□□□□□ -1.88
PNKP-229ENST00000637897 LINC01554Q52M75 96 aa3.33□□□□□ -1.88
PNKP-229ENST00000637897 ROMO1P60602 79 aa3.32□□□□□ -1.88
PNKP-229ENST00000637897 KRTAP2-2Q9BYT5 123 aa3.3□□□□□ -1.88
PNKP-229ENST00000637897 KRTAP2-1Q9BYU5 128 aa3.3□□□□□ -1.88
PNKP-229ENST00000637897 PRAC1Q96KF2 57 aa3.28□□□□□ -1.88
PNKP-229ENST00000637897 KRTAP4-8A0A0G2JLE6 195 aa3.24□□□□□ -1.89
PNKP-229ENST00000637897 LOC100996750A0A140TA64 210 aa3.24□□□□□ -1.89
PNKP-229ENST00000637897 KRTAP4-6Q9BYQ5 205 aa3.24□□□□□ -1.89
PNKP-229ENST00000637897 KRTAP4-8Q9BYQ9 185 aa3.24□□□□□ -1.89
PNKP-229ENST00000637897 KRTAP25-1Q3LHN0 102 aa3.22□□□□□ -1.89
PNKP-229ENST00000637897 SPRR2FQ96RM1 72 aa3.22□□□□□ -1.89
PNKP-229ENST00000637897 LCE1AQ5T7P2 110 aa3.21□□□□□ -1.9
PNKP-229ENST00000637897 LCE4AQ5TA78 99 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms