RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 PRO0461Q9UI25 63 aa8.09□□□□□ -1.11
SMN2-215ENST00000628696 SPRR2EP22531 72 aa8.07□□□□□ -1.12
SMN2-215ENST00000628696 SPRR2BP35325 72 aa8.07□□□□□ -1.12
SMN2-215ENST00000628696 SPRR2AP35326 72 aa8.07□□□□□ -1.12
SMN2-215ENST00000628696 K7EP34 96 aa8.04□□□□□ -1.12
SMN2-215ENST00000628696 NDUFC1O43677 76 aa8.04□□□□□ -1.12
SMN2-215ENST00000628696 LOC101927531A0A1B0GV80 90 aa8.03□□□□□ -1.12
SMN2-215ENST00000628696 TRAV22A0A0B4J277 110 aa8.02□□□□□ -1.13
SMN2-215ENST00000628696 PRO2289Q9P1D8 64 aa8.02□□□□□ -1.13
SMN2-215ENST00000628696 H0YAA0 97 aa8□□□□□ -1.13
SMN2-215ENST00000628696 A8MUN3 132 aa7.99□□□□□ -1.13
SMN2-215ENST00000628696 ADM2Q7Z4H4 148 aa7.98□□□□□ -1.13
SMN2-215ENST00000628696 MT1XP80297 61 aa7.96□□□□□ -1.14
SMN2-215ENST00000628696 KRTAP8-1Q8IUC2 63 aa7.95□□□□□ -1.14
SMN2-215ENST00000628696 COL5A1-AS1Q5SY13 56 aa7.94□□□□□ -1.14
SMN2-215ENST00000628696 PLAC4Q8WY50 150 aa7.94□□□□□ -1.14
SMN2-215ENST00000628696 ACYP1P07311 99 aa7.9□□□□□ -1.14
SMN2-215ENST00000628696 LOC105371267A0A1B0GV96 52 aa7.88□□□□□ -1.15
SMN2-215ENST00000628696 H0Y9P7 68 aa7.88□□□□□ -1.15
SMN2-215ENST00000628696 ETDBQ3ZM63 59 aa7.88□□□□□ -1.15
SMN2-215ENST00000628696 LCE1AQ5T7P2 110 aa7.88□□□□□ -1.15
SMN2-215ENST00000628696 KRTAP2-2Q9BYT5 123 aa7.88□□□□□ -1.15
SMN2-215ENST00000628696 KRTAP2-1Q9BYU5 128 aa7.88□□□□□ -1.15
SMN2-215ENST00000628696 UQCRQO14949 82 aa7.85□□□□□ -1.15
SMN2-215ENST00000628696 GTF2H5Q6ZYL4 71 aa7.85□□□□□ -1.15
SMN2-215ENST00000628696 ATOX1O00244 68 aa7.84□□□□□ -1.15
SMN2-215ENST00000628696 F8W1H4 67 aa7.83□□□□□ -1.16
SMN2-215ENST00000628696 KRTAP12-2P59991 146 aa7.82□□□□□ -1.16
SMN2-215ENST00000628696 R4GN34 69 aa7.81□□□□□ -1.16
SMN2-215ENST00000628696 SPRR2DP22532 72 aa7.8□□□□□ -1.16
SMN2-215ENST00000628696 HIST1H4AP62805 103 aaKnown RBP7.8□□□□□ -1.16
SMN2-215ENST00000628696 KRTAP4-8A0A0G2JLE6 195 aa7.77□□□□□ -1.17
SMN2-215ENST00000628696 KRTAP4-8Q9BYQ9 185 aa7.77□□□□□ -1.17
SMN2-215ENST00000628696 M0QZ58 72 aa7.74□□□□□ -1.17
SMN2-215ENST00000628696 P0C880 135 aa7.73□□□□□ -1.17
SMN2-215ENST00000628696 LINC00208Q96KT6 92 aa7.73□□□□□ -1.17
SMN2-215ENST00000628696 ATP5EP2Q5VTU8 51 aa7.71□□□□□ -1.18
SMN2-215ENST00000628696 C20orf197Q8N268 126 aa7.71□□□□□ -1.18
SMN2-215ENST00000628696 LINC01554Q52M75 96 aa7.68□□□□□ -1.18
SMN2-215ENST00000628696 MP68P56378 58 aa7.62□□□□□ -1.19
SMN2-215ENST00000628696 KRTAP10-7P60409 375 aaPredicted RBP7.61□□□□□ -1.19
SMN2-215ENST00000628696 LCE3BQ5TA77 95 aa7.61□□□□□ -1.19
SMN2-215ENST00000628696 FAM240AA0A1B0GVK7 77 aa7.6□□□□□ -1.19
SMN2-215ENST00000628696 KRTAP10-12P60413 245 aa7.54□□□□□ -1.2
SMN2-215ENST00000628696 OCR1Q9BZK8 76 aa7.54□□□□□ -1.2
SMN2-215ENST00000628696 PCP4L1A6NKN8 68 aa7.5□□□□□ -1.21
SMN2-215ENST00000628696 LINC00643Q86TS7 51 aa7.5□□□□□ -1.21
SMN2-215ENST00000628696 DMAC1Q96GE9 116 aa7.49□□□□□ -1.21
SMN2-215ENST00000628696 MT-ATP8P03928 68 aa7.44□□□□□ -1.22
SMN2-215ENST00000628696 H3BPC8 53 aa7.41□□□□□ -1.22
SMN2-215ENST00000628696 H3BS24 57 aa7.41□□□□□ -1.22
SMN2-215ENST00000628696 TRAV7A0A075B6U4 112 aa7.33□□□□□ -1.24
SMN2-215ENST00000628696 SCGB1A1P11684 91 aa7.3□□□□□ -1.24
SMN2-215ENST00000628696 ACYP2P14621 99 aa7.27□□□□□ -1.25
SMN2-215ENST00000628696 SPTSSBQ8NFR3 76 aa7.26□□□□□ -1.25
SMN2-215ENST00000628696 GPR98Q8WXG9 6306 aa7.25□□□□□ -1.25
SMN2-215ENST00000628696 KRTAP4-9Q9BYQ8 210 aa7.2□□□□□ -1.26
SMN2-215ENST00000628696 DSTQ03001 7570 aaKnown RBP7.19□□□□□ -1.26
SMN2-215ENST00000628696 CHKB-CPT1BH3BT56 60 aa7.17□□□□□ -1.26
SMN2-215ENST00000628696 LCE5AQ5TCM9 118 aa7.15□□□□□ -1.26
SMN2-215ENST00000628696 CAMK2N1Q7Z7J9 78 aa7.14□□□□□ -1.27
SMN2-215ENST00000628696 KRTAP19-7Q3SYF9 63 aa7.11□□□□□ -1.27
SMN2-215ENST00000628696 KRTAP19-3Q7Z4W3 81 aa7.09□□□□□ -1.27
SMN2-215ENST00000628696 MT1EP04732 61 aa7.08□□□□□ -1.28
SMN2-215ENST00000628696 KRTAP13-4Q3LI77 160 aa7.07□□□□□ -1.28
SMN2-215ENST00000628696 J3QR89 54 aa7.05□□□□□ -1.28
SMN2-215ENST00000628696 A0A1B0GV90 55 aa7.02□□□□□ -1.29
SMN2-215ENST00000628696 CYSTM1Q9H1C7 97 aa6.98□□□□□ -1.29
SMN2-215ENST00000628696 LCE1DQ5T752 114 aa6.96□□□□□ -1.3
SMN2-215ENST00000628696 SMIM20Q8N5G0 67 aa6.94□□□□□ -1.3
SMN2-215ENST00000628696 SNURFQ9Y675 71 aa6.92□□□□□ -1.3
SMN2-215ENST00000628696 A0A0D9SG42 100 aa6.9□□□□□ -1.3
SMN2-215ENST00000628696 MT1GP13640 62 aa6.89□□□□□ -1.31
SMN2-215ENST00000628696 KRTAP19-5Q3LI72 72 aa6.88□□□□□ -1.31
SMN2-215ENST00000628696 MT4P47944 62 aa6.87□□□□□ -1.31
SMN2-215ENST00000628696 PP632Q6XCG6 107 aa6.85□□□□□ -1.31
SMN2-215ENST00000628696 LCE4AQ5TA78 99 aa6.84□□□□□ -1.31
SMN2-215ENST00000628696 SPANXA2-OT1Q8N9U9 137 aa6.82□□□□□ -1.32
SMN2-215ENST00000628696 SPINT4Q6UDR6 99 aa6.8□□□□□ -1.32
SMN2-215ENST00000628696 HMCN1Q96RW7 5635 aa6.79□□□□□ -1.32
SMN2-215ENST00000628696 MT1MQ8N339 61 aa6.77□□□□□ -1.33
SMN2-215ENST00000628696 SPATA8Q6RVD6 105 aa6.76□□□□□ -1.33
SMN2-215ENST00000628696 SERP1Q9Y6X1 66 aa6.75□□□□□ -1.33
SMN2-215ENST00000628696 SEC61GP60059 68 aa6.74□□□□□ -1.33
SMN2-215ENST00000628696 AHNAK2Q8IVF2 5795 aa6.72□□□□□ -1.33
SMN2-215ENST00000628696 COA5Q86WW8 74 aa6.7□□□□□ -1.34
SMN2-215ENST00000628696 SVIPQ8NHG7 77 aa6.7□□□□□ -1.34
SMN2-215ENST00000628696 MT1LQ93083 61 aa6.7□□□□□ -1.34
SMN2-215ENST00000628696 KRTAP12-1P59990 96 aa6.66□□□□□ -1.34
SMN2-215ENST00000628696 KRTAP4-3Q9BYR4 195 aa6.66□□□□□ -1.34
SMN2-215ENST00000628696 A0A1B0GU33 70 aa6.65□□□□□ -1.34
SMN2-215ENST00000628696 KRTAP5-4Q6L8H1 288 aa6.62□□□□□ -1.35
SMN2-215ENST00000628696 KRTAP4-6Q9BYQ5 205 aa6.62□□□□□ -1.35
SMN2-215ENST00000628696 KRTAP5-10Q6L8G5 202 aa6.61□□□□□ -1.35
SMN2-215ENST00000628696 K7ERU9 68 aa6.59□□□□□ -1.35
SMN2-215ENST00000628696 SERP2Q8N6R1 65 aa6.59□□□□□ -1.35
SMN2-215ENST00000628696 C10orf95Q9H7T3 257 aa6.57□□□□□ -1.36
SMN2-215ENST00000628696 LCE3AQ5TA76 89 aa6.55□□□□□ -1.36
SMN2-215ENST00000628696 TNP1P09430 55 aa6.47□□□□□ -1.37
SMN2-215ENST00000628696 SMIM26A0A096LP01 95 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms